RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ZCCHC11Q5TAX3 1644 aaKnown RBP7.61□□□□□ -1.19
VPS50-202ENST00000305866 INO80Q9ULG1 1556 aaPredicted RBP7.61□□□□□ -1.19
VPS50-202ENST00000305866 FAM135AQ9P2D6 1515 aa7.61□□□□□ -1.19
VPS50-202ENST00000305866 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
VPS50-202ENST00000305866 C9orf84Q5VXU9 1444 aa7.61□□□□□ -1.19
VPS50-202ENST00000305866 ERBINQ96RT1 1412 aa7.61□□□□□ -1.19
VPS50-202ENST00000305866 SHPRHQ149N8 1683 aa7.61□□□□□ -1.19
VPS50-202ENST00000305866 KTN1Q86UP2 1357 aaKnown RBP7.61□□□□□ -1.19
VPS50-202ENST00000305866 DUOX2Q9NRD8 1548 aa7.6□□□□□ -1.19
VPS50-202ENST00000305866 ANP32CO43423 234 aa7.6□□□□□ -1.19
VPS50-202ENST00000305866 MADDQ8WXG6 1647 aa7.6□□□□□ -1.19
VPS50-202ENST00000305866 PAK3O75914 559 aaPredicted RBP7.6□□□□□ -1.19
VPS50-202ENST00000305866 ANKRD30AQ9BXX3 1397 aa7.6□□□□□ -1.19
VPS50-202ENST00000305866 RTEL1-TNFRSF6BF6WH68 1400 aa7.59□□□□□ -1.19
VPS50-202ENST00000305866 ANKRD50Q9ULJ7 1429 aa7.59□□□□□ -1.19
VPS50-202ENST00000305866 RSPH4AQ5TD94 716 aa7.59□□□□□ -1.19
VPS50-202ENST00000305866 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
VPS50-202ENST00000305866 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
VPS50-202ENST00000305866 MYO3AQ8NEV4 1616 aa7.58□□□□□ -1.2
VPS50-202ENST00000305866 PARD3Q8TEW0 1356 aa7.57□□□□□ -1.2
VPS50-202ENST00000305866 LMTK2Q8IWU2 1503 aa7.57□□□□□ -1.2
VPS50-202ENST00000305866 COL17A1Q9UMD9 1497 aaPredicted RBP7.56□□□□□ -1.2
VPS50-202ENST00000305866 MROH1Q8NDA8 1641 aa7.56□□□□□ -1.2
VPS50-202ENST00000305866 TET3O43151 1660 aa7.56□□□□□ -1.2
VPS50-202ENST00000305866 TRPM2O94759 1503 aa7.56□□□□□ -1.2
VPS50-202ENST00000305866 ROCK2O75116 1388 aaKnown RBP7.56□□□□□ -1.2
VPS50-202ENST00000305866 PNISRQ8TF01 805 aaKnown RBP7.56□□□□□ -1.2
VPS50-202ENST00000305866 PTPRTO14522 1441 aa7.56□□□□□ -1.2
VPS50-202ENST00000305866 ZNF644Q9H582 1327 aaPredicted RBP7.56□□□□□ -1.2
VPS50-202ENST00000305866 JPH4Q96JJ6 628 aa7.56□□□□□ -1.2
VPS50-202ENST00000305866 ZFYVE16Q7Z3T8 1539 aa7.55□□□□□ -1.2
VPS50-202ENST00000305866 PLCH2O75038 1416 aa7.55□□□□□ -1.2
VPS50-202ENST00000305866 PRAG1Q86YV5 1406 aa7.55□□□□□ -1.2
VPS50-202ENST00000305866 FOXD1Q16676 465 aa7.54□□□□□ -1.2
VPS50-202ENST00000305866 SYCP2Q9BX26 1530 aa7.54□□□□□ -1.2
VPS50-202ENST00000305866 IRX6P78412 446 aaPredicted RBP7.54□□□□□ -1.2
VPS50-202ENST00000305866 A2MP01023 1474 aa7.54□□□□□ -1.2
VPS50-202ENST00000305866 NLRP1Q9C000 1473 aa7.54□□□□□ -1.2
VPS50-202ENST00000305866 NRXN1Q9ULB1 1477 aa7.54□□□□□ -1.2
VPS50-202ENST00000305866 HNRNPUQ00839 825 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS50-202ENST00000305866 PER1O15534 1290 aaPredicted RBP7.53□□□□□ -1.2
VPS50-202ENST00000305866 SCAPERQ9BY12 1400 aa7.53□□□□□ -1.2
VPS50-202ENST00000305866 EIF4G2P78344 907 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS50-202ENST00000305866 PPRC1Q5VV67 1664 aaKnown RBP7.53□□□□□ -1.2
VPS50-202ENST00000305866 ERCC6L2Q5T890 1561 aa7.53□□□□□ -1.2
VPS50-202ENST00000305866 USP47Q96K76 1375 aa7.52□□□□□ -1.2
VPS50-202ENST00000305866 RRP7BPQ9NSQ0 103 aa7.52□□□□□ -1.21
VPS50-202ENST00000305866 SYNMO15061 1565 aa7.52□□□□□ -1.21
VPS50-202ENST00000305866 ABCA6Q8N139 1617 aa7.51□□□□□ -1.21
VPS50-202ENST00000305866 MROH2AA6NES4 1674 aa7.51□□□□□ -1.21
VPS50-202ENST00000305866 WASHC2CQ9Y4E1 1318 aa7.51□□□□□ -1.21
VPS50-202ENST00000305866 CFAP74Q9C0B2 1584 aa7.51□□□□□ -1.21
VPS50-202ENST00000305866 B4GALNT3Q6L9W6 998 aa7.51□□□□□ -1.21
VPS50-202ENST00000305866 NUDCQ9Y266 331 aa7.5□□□□□ -1.21
VPS50-202ENST00000305866 MYOM2P54296 1465 aa7.5□□□□□ -1.21
VPS50-202ENST00000305866 USP32Q8NFA0 1604 aa7.5□□□□□ -1.21
VPS50-202ENST00000305866 SETBP1Q9Y6X0 1596 aa7.5□□□□□ -1.21
VPS50-202ENST00000305866 BRD4O60885 1362 aaPredicted RBP7.49□□□□□ -1.21
VPS50-202ENST00000305866 KIF15Q9NS87 1388 aa7.49□□□□□ -1.21
VPS50-202ENST00000305866 ZNF521Q96K83 1311 aa7.49□□□□□ -1.21
VPS50-202ENST00000305866 CLTCL1P53675 1640 aa7.49□□□□□ -1.21
VPS50-202ENST00000305866 KDM2BQ8NHM5 1336 aa7.49□□□□□ -1.21
VPS50-202ENST00000305866 ZNF518AQ6AHZ1 1483 aa7.49□□□□□ -1.21
VPS50-202ENST00000305866 CFDP1Q9UEE9 299 aaPredicted RBP7.48□□□□□ -1.21
VPS50-202ENST00000305866 STAC3Q96MF2 364 aa7.48□□□□□ -1.21
VPS50-202ENST00000305866 PIK3C2BO00750 1634 aa7.48□□□□□ -1.21
VPS50-202ENST00000305866 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
VPS50-202ENST00000305866 DEKP35659 375 aaKnown RBP7.46□□□□□ -1.21
VPS50-202ENST00000305866 TESK2Q96S53 571 aa7.46□□□□□ -1.21
VPS50-202ENST00000305866 ARHGAP5Q13017 1502 aa7.46□□□□□ -1.22
VPS50-202ENST00000305866 NPC1L1Q9UHC9 1359 aa7.46□□□□□ -1.22
VPS50-202ENST00000305866 KIDINS220Q9ULH0 1771 aa7.46□□□□□ -1.22
VPS50-202ENST00000305866 EFCAB6Q5THR3 1501 aa7.46□□□□□ -1.22
VPS50-202ENST00000305866 MAP3K4Q9Y6R4 1608 aa7.45□□□□□ -1.22
VPS50-202ENST00000305866 PLEKHD1A6NEE1 506 aa7.45□□□□□ -1.22
VPS50-202ENST00000305866 FANCAO15360 1455 aa7.45□□□□□ -1.22
VPS50-202ENST00000305866 CHIC2Q9UKJ5 165 aa7.45□□□□□ -1.22
VPS50-202ENST00000305866 DISP3Q9P2K9 1392 aa7.45□□□□□ -1.22
VPS50-202ENST00000305866 PPLO60437 1756 aa7.44□□□□□ -1.22
VPS50-202ENST00000305866 ADGRB3O60242 1522 aa7.44□□□□□ -1.22
VPS50-202ENST00000305866 ATP7AQ04656 1500 aa7.44□□□□□ -1.22
VPS50-202ENST00000305866 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
VPS50-202ENST00000305866 IQSEC2Q5JU85 1478 aa7.44□□□□□ -1.22
VPS50-202ENST00000305866 NOP58Q9Y2X3 529 aaKnown RBP7.44□□□□□ -1.22
VPS50-202ENST00000305866 KDM5AP29375 1690 aaKnown RBP7.43□□□□□ -1.22
VPS50-202ENST00000305866 TRMT2AQ8IZ69 625 aaKnown RBP7.43□□□□□ -1.22
VPS50-202ENST00000305866 SLC4A1APQ9BWU0 796 aaKnown RBP7.43□□□□□ -1.22
VPS50-202ENST00000305866 FRMPD1Q5SYB0 1578 aa7.43□□□□□ -1.22
VPS50-202ENST00000305866 ADGRB2O60241 1585 aa7.43□□□□□ -1.22
VPS50-202ENST00000305866 HECW2Q9P2P5 1572 aa7.43□□□□□ -1.22
VPS50-202ENST00000305866 BACH2Q9BYV9 841 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 MRS2Q9HD23 443 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 ATP1B4Q9UN42 357 aaPredicted RBP7.42□□□□□ -1.22
VPS50-202ENST00000305866 ANKRD26Q9UPS8 1709 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 NUP155O75694 1391 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 NEFLP07196 543 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 AEBP2Q6ZN18 517 aaPredicted RBP7.42□□□□□ -1.22
VPS50-202ENST00000305866 TUBGCP6Q96RT7 1819 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 USP19O94966 1318 aa7.42□□□□□ -1.22
VPS50-202ENST00000305866 REREQ9P2R6 1566 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms