RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 EIF2AK4Q9P2K8 1649 aaKnown RBP40.96■■■■■ 4.15
CDKN2A-201ENST00000304494 PTPRKQ15262 1439 aa40.95■■■■■ 4.15
CDKN2A-201ENST00000304494 DUOX2Q9NRD8 1548 aa40.95■■■■■ 4.15
CDKN2A-201ENST00000304494 WASHC2CQ9Y4E1 1318 aa40.93■■■■■ 4.14
CDKN2A-201ENST00000304494 RNF17Q9BXT8 1623 aaKnown RBP40.91■■■■■ 4.14
CDKN2A-201ENST00000304494 KIF15Q9NS87 1388 aa40.9■■■■■ 4.14
CDKN2A-201ENST00000304494 RRP7BPQ9NSQ0 103 aa40.85■■■■■ 4.13
CDKN2A-201ENST00000304494 FAM50AQ14320 339 aaKnown RBP40.84■■■■■ 4.13
CDKN2A-201ENST00000304494 ERBINQ96RT1 1412 aa40.84■■■■■ 4.13
CDKN2A-201ENST00000304494 ANKRD30AQ9BXX3 1397 aa40.83■■■■■ 4.13
CDKN2A-201ENST00000304494 PZPP20742 1482 aa40.83■■■■■ 4.13
CDKN2A-201ENST00000304494 MYO3AQ8NEV4 1616 aa40.82■■■■■ 4.13
CDKN2A-201ENST00000304494 DMRT2Q9Y5R5 561 aa40.82■■■■■ 4.13
CDKN2A-201ENST00000304494 ZC3H13Q5T200 1668 aaKnown RBP40.79■■■■■ 4.12
CDKN2A-201ENST00000304494 STRCQ7RTU9 1775 aa40.79■■■■■ 4.12
CDKN2A-201ENST00000304494 CHIC2Q9UKJ5 165 aa40.78■■■■■ 4.12
CDKN2A-201ENST00000304494 ZNF142P52746 1687 aaPredicted RBP40.77■■■■■ 4.12
CDKN2A-201ENST00000304494 ABCC3O15438 1527 aa40.76■■■■■ 4.12
CDKN2A-201ENST00000304494 MROH1Q8NDA8 1641 aa40.75■■■■■ 4.11
CDKN2A-201ENST00000304494 CEP170BQ9Y4F5 1589 aaPredicted RBP40.74■■■■■ 4.11
CDKN2A-201ENST00000304494 NCOA1Q15788 1441 aa40.73■■■■■ 4.11
CDKN2A-201ENST00000304494 FBXO31Q5XUX0 539 aaPredicted RBP40.72■■■■■ 4.11
CDKN2A-201ENST00000304494 TNRQ92752 1358 aa40.72■■■■■ 4.11
CDKN2A-201ENST00000304494 ADGRL2O95490 1459 aa40.71■■■■■ 4.11
CDKN2A-201ENST00000304494 CAMSAP1Q5T5Y3 1602 aa40.71■■■■■ 4.11
CDKN2A-201ENST00000304494 PRDM15P57071 1507 aaPredicted RBP40.68■■■■■ 4.1
CDKN2A-201ENST00000304494 A2ML1A8K2U0 1454 aa40.67■■■■■ 4.1
CDKN2A-201ENST00000304494 ILDR1Q86SU0 546 aaPredicted RBP40.67■■■■■ 4.1
CDKN2A-201ENST00000304494 PTPRTO14522 1441 aa40.66■■■■■ 4.1
CDKN2A-201ENST00000304494 PPARGC1BQ86YN6 1023 aaKnown RBP40.63■■■■■ 4.09
CDKN2A-201ENST00000304494 PLA2R1Q13018 1463 aa40.63■■■■■ 4.09
CDKN2A-201ENST00000304494 DEPDC5O75140 1603 aa40.62■■■■■ 4.09
CDKN2A-201ENST00000304494 CEP152O94986 1710 aa40.61■■■■■ 4.09
CDKN2A-201ENST00000304494 KANK1Q14678 1352 aa40.6■■■■■ 4.09
CDKN2A-201ENST00000304494 NLRP1Q9C000 1473 aa40.58■■■■■ 4.09
CDKN2A-201ENST00000304494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.57■■■■■ 4.09
CDKN2A-201ENST00000304494 SPATA31D1Q6ZQQ2 1576 aa40.56■■■■■ 4.08
CDKN2A-201ENST00000304494 PKD2Q13563 968 aa40.54■■■■■ 4.08
CDKN2A-201ENST00000304494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.53■■■■■ 4.08
CDKN2A-201ENST00000304494 ERVK-7P63135 1459 aa40.52■■■■■ 4.08
CDKN2A-201ENST00000304494 ARHGAP31Q2M1Z3 1444 aa40.52■■■■■ 4.08
CDKN2A-201ENST00000304494 NCKAP5LQ9HCH0 1330 aa40.51■■■■■ 4.08
CDKN2A-201ENST00000304494 ANKRD50Q9ULJ7 1429 aa40.5■■■■■ 4.07
CDKN2A-201ENST00000304494 FBXO41Q8TF61 875 aa40.5■■■■■ 4.07
CDKN2A-201ENST00000304494 ROCK1Q13464 1354 aa40.48■■■■■ 4.07
CDKN2A-201ENST00000304494 CERKQ8TCT0 537 aa40.46■■■■■ 4.07
CDKN2A-201ENST00000304494 LMTK2Q8IWU2 1503 aa40.46■■■■■ 4.07
CDKN2A-201ENST00000304494 VWDEQ8N2E2 1590 aa40.45■■■■■ 4.07
CDKN2A-201ENST00000304494 UGGT1Q9NYU2 1555 aa40.45■■■■■ 4.07
CDKN2A-201ENST00000304494 THEMISQ8N1K5 641 aaPredicted RBP40.44■■■■■ 4.06
CDKN2A-201ENST00000304494 ITGAEP38570 1179 aa40.38■■■■■ 4.05
CDKN2A-201ENST00000304494 RRBP1Q9P2E9 1410 aaKnown RBP40.34■■■■■ 4.05
CDKN2A-201ENST00000304494 CFAP65Q6ZU64 1925 aaKnown RBP40.33■■■■■ 4.05
CDKN2A-201ENST00000304494 POLR1AO95602 1720 aaPredicted RBP40.33■■■■■ 4.05
CDKN2A-201ENST00000304494 ANKLE2Q86XL3 938 aa40.32■■■■■ 4.05
CDKN2A-201ENST00000304494 EFCAB6Q5THR3 1501 aa40.32■■■■■ 4.04
CDKN2A-201ENST00000304494 LTBP4Q8N2S1 1624 aa40.27■■■■■ 4.04
CDKN2A-201ENST00000304494 UNC13BO14795 1591 aa40.27■■■■■ 4.04
CDKN2A-201ENST00000304494 NEURL4Q96JN8 1562 aa40.26■■■■■ 4.04
CDKN2A-201ENST00000304494 UBR1Q8IWV7 1749 aa40.23■■■■■ 4.03
CDKN2A-201ENST00000304494 RPRD2Q5VT52 1461 aaKnown RBP40.22■■■■■ 4.03
CDKN2A-201ENST00000304494 ZNF335Q9H4Z2 1342 aaPredicted RBP40.19■■■■■ 4.02
CDKN2A-201ENST00000304494 TET3O43151 1660 aa40.19■■■■■ 4.02
CDKN2A-201ENST00000304494 MED14O60244 1454 aa40.19■■■■■ 4.02
CDKN2A-201ENST00000304494 NOS1P29475 1434 aa40.18■■■■■ 4.02
CDKN2A-201ENST00000304494 NPHP4O75161 1426 aaPredicted RBP40.16■■■■■ 4.02
CDKN2A-201ENST00000304494 SYNMO15061 1565 aa40.14■■■■■ 4.02
CDKN2A-201ENST00000304494 IQSEC2Q5JU85 1478 aa40.14■■■■■ 4.02
CDKN2A-201ENST00000304494 PIK3C2BO00750 1634 aa40.14■■■■■ 4.02
CDKN2A-201ENST00000304494 STAG3Q9UJ98 1225 aa40.13■■■■■ 4.01
CDKN2A-201ENST00000304494 GCC2Q8IWJ2 1684 aa40.12■■■■■ 4.01
CDKN2A-201ENST00000304494 IDI1Q13907 227 aa40.11■■■■■ 4.01
CDKN2A-201ENST00000304494 SLIT1O75093 1534 aa40.11■■■■■ 4.01
CDKN2A-201ENST00000304494 IQGAP3Q86VI3 1631 aa40.1■■■■■ 4.01
CDKN2A-201ENST00000304494 KDM5AP29375 1690 aaKnown RBP40.1■■■■■ 4.01
CDKN2A-201ENST00000304494 ARHGAP23Q9P227 1491 aa40.09■■■■■ 4.01
CDKN2A-201ENST00000304494 SLC52A1Q9NWF4 448 aa40.09■■■■■ 4.01
CDKN2A-201ENST00000304494 NUP155O75694 1391 aa40.09■■■■■ 4.01
CDKN2A-201ENST00000304494 IQGAP1P46940 1657 aa40.08■■■■■ 4.01
CDKN2A-201ENST00000304494 SCAF11Q99590 1463 aaKnown RBP40.07■■■■■ 4.01
CDKN2A-201ENST00000304494 EID1Q9Y6B2 187 aa40.04■■■■■ 4
CDKN2A-201ENST00000304494 TXNDC2Q86VQ3 553 aa40.03■■■■■ 4
CDKN2A-201ENST00000304494 TMEM2Q9UHN6 1383 aa40.02■■■■■ 4
CDKN2A-201ENST00000304494 ADGRB3O60242 1522 aa40.01■■■■□ 3.99
CDKN2A-201ENST00000304494 E9PCH4 1651 aa39.99■■■■□ 3.99
CDKN2A-201ENST00000304494 NAIPQ13075 1403 aa39.99■■■■□ 3.99
CDKN2A-201ENST00000304494 LTKP29376 864 aa39.98■■■■□ 3.99
CDKN2A-201ENST00000304494 CPS1P31327 1500 aa39.97■■■■□ 3.99
CDKN2A-201ENST00000304494 HFM1A2PYH4 1435 aa39.91■■■■□ 3.98
CDKN2A-201ENST00000304494 TMEM131LA2VDJ0 1609 aa39.82■■■■□ 3.96
CDKN2A-201ENST00000304494 UBAP1LF5GYI3 381 aa39.78■■■■□ 3.96
CDKN2A-201ENST00000304494 HDGFP51858 240 aaKnown RBP39.78■■■■□ 3.96
CDKN2A-201ENST00000304494 CHGAP10645 457 aaKnown RBP39.77■■■■□ 3.96
CDKN2A-201ENST00000304494 ZFYVE9O95405 1425 aa39.74■■■■□ 3.95
CDKN2A-201ENST00000304494 MYO5BQ9ULV0 1848 aa39.74■■■■□ 3.95
CDKN2A-201ENST00000304494 SPHKAPQ2M3C7 1700 aa39.73■■■■□ 3.95
CDKN2A-201ENST00000304494 RIMS2Q9UQ26 1411 aa39.73■■■■□ 3.95
CDKN2A-201ENST00000304494 STRCP1A6NGW2 1772 aa39.72■■■■□ 3.95
CDKN2A-201ENST00000304494 TRIM52Q96A61 297 aa39.72■■■■□ 3.95
CDKN2A-201ENST00000304494 PPP1R15AO75807 674 aaPredicted RBP39.69■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms