RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 CLTCQ00610 1675 aaKnown RBP40.1■■■■■ 4.01
POLR1D-201ENST00000302979 ITGAEP38570 1179 aa40.08■■■■■ 4.01
POLR1D-201ENST00000302979 GGT6Q6P531 493 aa40.08■■■■■ 4.01
POLR1D-201ENST00000302979 CNTLNQ9NXG0 1405 aa40.07■■■■■ 4
POLR1D-201ENST00000302979 FAM135AQ9P2D6 1515 aa40.06■■■■■ 4
POLR1D-201ENST00000302979 DEPDC5O75140 1603 aa40.06■■■■■ 4
POLR1D-201ENST00000302979 C3P01024 1663 aa40.06■■■■■ 4
POLR1D-201ENST00000302979 PRDM15P57071 1507 aaPredicted RBP40.03■■■■■ 4
POLR1D-201ENST00000302979 KDM5DQ9BY66 1539 aa40.03■■■■■ 4
POLR1D-201ENST00000302979 ANKRD50Q9ULJ7 1429 aa39.99■■■■□ 3.99
POLR1D-201ENST00000302979 PPP6R1Q9UPN7 881 aa39.99■■■■□ 3.99
POLR1D-201ENST00000302979 ZC3H13Q5T200 1668 aaKnown RBP39.98■■■■□ 3.99
POLR1D-201ENST00000302979 ESF1Q9H501 851 aaKnown RBP39.95■■■■□ 3.99
POLR1D-201ENST00000302979 ABCC3O15438 1527 aa39.94■■■■□ 3.98
POLR1D-201ENST00000302979 GCC2Q8IWJ2 1684 aa39.92■■■■□ 3.98
POLR1D-201ENST00000302979 CEP152O94986 1710 aa39.92■■■■□ 3.98
POLR1D-201ENST00000302979 CEBPAP49715 358 aaPredicted RBP39.9■■■■□ 3.98
POLR1D-201ENST00000302979 ZMYM3Q14202 1370 aa39.89■■■■□ 3.98
POLR1D-201ENST00000302979 VWDEQ8N2E2 1590 aa39.89■■■■□ 3.98
POLR1D-201ENST00000302979 UNC13BO14795 1591 aa39.88■■■■□ 3.97
POLR1D-201ENST00000302979 PLPPR3Q6T4P5 718 aa39.87■■■■□ 3.97
POLR1D-201ENST00000302979 NAIPQ13075 1403 aa39.84■■■■□ 3.97
POLR1D-201ENST00000302979 CAMSAP1Q5T5Y3 1602 aa39.83■■■■□ 3.97
POLR1D-201ENST00000302979 WASHC2CQ9Y4E1 1318 aa39.83■■■■□ 3.97
POLR1D-201ENST00000302979 HFM1A2PYH4 1435 aa39.81■■■■□ 3.96
POLR1D-201ENST00000302979 PZPP20742 1482 aa39.79■■■■□ 3.96
POLR1D-201ENST00000302979 LMTK2Q8IWU2 1503 aa39.78■■■■□ 3.96
POLR1D-201ENST00000302979 PREX1Q8TCU6 1659 aa39.78■■■■□ 3.96
POLR1D-201ENST00000302979 NPATQ14207 1427 aa39.77■■■■□ 3.96
POLR1D-201ENST00000302979 LMTK3Q96Q04 1460 aa39.74■■■■□ 3.95
POLR1D-201ENST00000302979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.73■■■■□ 3.955e-7■■■□□ 18.6
POLR1D-201ENST00000302979 KANK1Q14678 1352 aa39.72■■■■□ 3.95
POLR1D-201ENST00000302979 SETD1BQ9UPS6 1966 aaKnown RBP39.7■■■■□ 3.95
POLR1D-201ENST00000302979 IQGAP3Q86VI3 1631 aa39.69■■■■□ 3.94
POLR1D-201ENST00000302979 EFCAB6Q5THR3 1501 aa39.67■■■■□ 3.94
POLR1D-201ENST00000302979 ARHGAP31Q2M1Z3 1444 aa39.66■■■■□ 3.94
POLR1D-201ENST00000302979 MYO3AQ8NEV4 1616 aa39.66■■■■□ 3.94
POLR1D-201ENST00000302979 TET3O43151 1660 aa39.64■■■■□ 3.94
POLR1D-201ENST00000302979 SPATA31D1Q6ZQQ2 1576 aa39.64■■■■□ 3.94
POLR1D-201ENST00000302979 UHRF1BP1Q6BDS2 1440 aa39.61■■■■□ 3.93
POLR1D-201ENST00000302979 ERVK-7P63135 1459 aa39.61■■■■□ 3.93
POLR1D-201ENST00000302979 FBXO31Q5XUX0 539 aaPredicted RBP39.6■■■■□ 3.93
POLR1D-201ENST00000302979 ZNF142P52746 1687 aaPredicted RBP39.6■■■■□ 3.93
POLR1D-201ENST00000302979 NUP155O75694 1391 aa39.54■■■■□ 3.92
POLR1D-201ENST00000302979 TNRQ92752 1358 aa39.54■■■■□ 3.92
POLR1D-201ENST00000302979 CFAP65Q6ZU64 1925 aaKnown RBP39.53■■■■□ 3.92
POLR1D-201ENST00000302979 E9PCH4 1651 aa39.51■■■■□ 3.92
POLR1D-201ENST00000302979 CEP170BQ9Y4F5 1589 aaPredicted RBP39.51■■■■□ 3.92
POLR1D-201ENST00000302979 RPRD2Q5VT52 1461 aaKnown RBP39.49■■■■□ 3.91
POLR1D-201ENST00000302979 SYNMO15061 1565 aa39.45■■■■□ 3.91
POLR1D-201ENST00000302979 SETD5Q9C0A6 1442 aa39.44■■■■□ 3.9
POLR1D-201ENST00000302979 A2ML1A8K2U0 1454 aa39.43■■■■□ 3.9
POLR1D-201ENST00000302979 NOS1P29475 1434 aa39.43■■■■□ 3.9
POLR1D-201ENST00000302979 NLRP1Q9C000 1473 aa39.43■■■■□ 3.9
POLR1D-201ENST00000302979 HSPA2P54652 639 aa39.41■■■■□ 3.9
POLR1D-201ENST00000302979 RAB3GAP2Q9H2M9 1393 aa39.34■■■■□ 3.89
POLR1D-201ENST00000302979 PIK3C2BO00750 1634 aa39.3■■■■□ 3.88
POLR1D-201ENST00000302979 TRIM52Q96A61 297 aa39.3■■■■□ 3.88
POLR1D-201ENST00000302979 UGGT1Q9NYU2 1555 aa39.29■■■■□ 3.88
POLR1D-201ENST00000302979 UBR1Q8IWV7 1749 aa39.29■■■■□ 3.88
POLR1D-201ENST00000302979 STRCQ7RTU9 1775 aa39.29■■■■□ 3.88
POLR1D-201ENST00000302979 SPHKAPQ2M3C7 1700 aa39.28■■■■□ 3.88
POLR1D-201ENST00000302979 PLA2R1Q13018 1463 aa39.24■■■■□ 3.87
POLR1D-201ENST00000302979 KDM5AP29375 1690 aaKnown RBP39.22■■■■□ 3.87
POLR1D-201ENST00000302979 PTPRTO14522 1441 aa39.2■■■■□ 3.87
POLR1D-201ENST00000302979 ADGRB3O60242 1522 aa39.18■■■■□ 3.86
POLR1D-201ENST00000302979 SLC4A1APQ9BWU0 796 aaKnown RBP39.17■■■■□ 3.86
POLR1D-201ENST00000302979 TRPM2O94759 1503 aa39.16■■■■□ 3.86
POLR1D-201ENST00000302979 IDI1Q13907 227 aa39.16■■■■□ 3.86
POLR1D-201ENST00000302979 ACIN1Q9UKV3 1341 aaKnown RBP39.15■■■■□ 3.86
POLR1D-201ENST00000302979 PKD2Q13563 968 aa39.15■■■■□ 3.86
POLR1D-201ENST00000302979 SLC52A1Q9NWF4 448 aa39.13■■■■□ 3.85
POLR1D-201ENST00000302979 POLR1AO95602 1720 aaPredicted RBP39.13■■■■□ 3.85
POLR1D-201ENST00000302979 TMEM131LA2VDJ0 1609 aa39.11■■■■□ 3.85
POLR1D-201ENST00000302979 HRCP23327 699 aa39.1■■■■□ 3.85
POLR1D-201ENST00000302979 TRIM26Q12899 539 aaPredicted RBP39.1■■■■□ 3.85
POLR1D-201ENST00000302979 MYO5BQ9ULV0 1848 aa39.1■■■■□ 3.85
POLR1D-201ENST00000302979 MPHOSPH9Q99550 1183 aa39.09■■■■□ 3.85
POLR1D-201ENST00000302979 CLTCL1P53675 1640 aa39.09■■■■□ 3.85
POLR1D-201ENST00000302979 THEMISQ8N1K5 641 aaPredicted RBP39.08■■■■□ 3.85
POLR1D-201ENST00000302979 SLIT1O75093 1534 aa39.08■■■■□ 3.85
POLR1D-201ENST00000302979 NEURL4Q96JN8 1562 aa39.08■■■■□ 3.85
POLR1D-201ENST00000302979 ARHGAP23Q9P227 1491 aa39.07■■■■□ 3.85
POLR1D-201ENST00000302979 FOXD1Q16676 465 aa39.01■■■■□ 3.84
POLR1D-201ENST00000302979 NCKAP5LQ9HCH0 1330 aa39■■■■□ 3.83
POLR1D-201ENST00000302979 TMEM2Q9UHN6 1383 aa38.97■■■■□ 3.83
POLR1D-201ENST00000302979 STAG3Q9UJ98 1225 aa38.95■■■■□ 3.83
POLR1D-201ENST00000302979 MED14O60244 1454 aa38.93■■■■□ 3.82
POLR1D-201ENST00000302979 SCAF11Q99590 1463 aaKnown RBP38.93■■■■□ 3.82
POLR1D-201ENST00000302979 KIF1BO60333 1816 aa38.91■■■■□ 3.82
POLR1D-201ENST00000302979 ZFYVE9O95405 1425 aa38.9■■■■□ 3.82
POLR1D-201ENST00000302979 ANKLE2Q86XL3 938 aa38.9■■■■□ 3.82
POLR1D-201ENST00000302979 IQGAP1P46940 1657 aa38.89■■■■□ 3.82
POLR1D-201ENST00000302979 DMRT2Q9Y5R5 561 aa38.88■■■■□ 3.81
POLR1D-201ENST00000302979 LTKP29376 864 aa38.87■■■■□ 3.81
POLR1D-201ENST00000302979 NPHP4O75161 1426 aaPredicted RBP38.85■■■■□ 3.81
POLR1D-201ENST00000302979 CHGAP10645 457 aaKnown RBP38.84■■■■□ 3.81
POLR1D-201ENST00000302979 RIMS2Q9UQ26 1411 aa38.82■■■■□ 3.81
POLR1D-201ENST00000302979 CCDC144AA2RUR9 1427 aa38.81■■■■□ 3.8
POLR1D-201ENST00000302979 TXNDC2Q86VQ3 553 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms