RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
ITGB1-201ENST00000302278 SPAG9O60271 1321 aaKnown RBP10.79□□□□□ -0.68
ITGB1-201ENST00000302278 ZNF335Q9H4Z2 1342 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-201ENST00000302278 XIRP1Q702N8 1843 aaKnown RBP10.79□□□□□ -0.68
ITGB1-201ENST00000302278 CEP162Q5TB80 1403 aa10.79□□□□□ -0.68
ITGB1-201ENST00000302278 CAMSAP2Q08AD1 1489 aa10.78□□□□□ -0.68
ITGB1-201ENST00000302278 ESF1Q9H501 851 aaKnown RBP10.78□□□□□ -0.68
ITGB1-201ENST00000302278 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
ITGB1-201ENST00000302278 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
ITGB1-201ENST00000302278 UBR1Q8IWV7 1749 aa10.77□□□□□ -0.69
ITGB1-201ENST00000302278 DHX29Q7Z478 1369 aaKnown RBP10.77□□□□□ -0.69
ITGB1-201ENST00000302278 MROH1Q8NDA8 1641 aa10.77□□□□□ -0.69
ITGB1-201ENST00000302278 CCDC141Q6ZP82 1450 aa10.75□□□□□ -0.69
ITGB1-201ENST00000302278 UGGT1Q9NYU2 1555 aa10.74□□□□□ -0.69
ITGB1-201ENST00000302278 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
ITGB1-201ENST00000302278 TNRQ92752 1358 aa10.73□□□□□ -0.69
ITGB1-201ENST00000302278 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
ITGB1-201ENST00000302278 ABCC3O15438 1527 aa10.72□□□□□ -0.69
ITGB1-201ENST00000302278 SLIT1O75093 1534 aa10.72□□□□□ -0.69
ITGB1-201ENST00000302278 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
ITGB1-201ENST00000302278 UBAP1LF5GYI3 381 aa10.72□□□□□ -0.69
ITGB1-201ENST00000302278 ARHGAP23Q9P227 1491 aa10.71□□□□□ -0.69
ITGB1-201ENST00000302278 CROCC2H7BZ55 1655 aa10.71□□□□□ -0.69
ITGB1-201ENST00000302278 HNRNPMP52272 730 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■■■□□ 18
ITGB1-201ENST00000302278 NPHP4O75161 1426 aaPredicted RBP10.71□□□□□ -0.7
ITGB1-201ENST00000302278 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
ITGB1-201ENST00000302278 CEP152O94986 1710 aa10.7□□□□□ -0.7
ITGB1-201ENST00000302278 PRDM15P57071 1507 aaPredicted RBP10.7□□□□□ -0.7
ITGB1-201ENST00000302278 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-201ENST00000302278 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
ITGB1-201ENST00000302278 ERVK-7P63135 1459 aa10.69□□□□□ -0.7
ITGB1-201ENST00000302278 CFDP1Q9UEE9 299 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-201ENST00000302278 RSPH4AQ5TD94 716 aa10.68□□□□□ -0.7
ITGB1-201ENST00000302278 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
ITGB1-201ENST00000302278 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
ITGB1-201ENST00000302278 HSPA1LP34931 641 aa10.67□□□□□ -0.7
ITGB1-201ENST00000302278 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
ITGB1-201ENST00000302278 TOM1O60784 492 aa10.67□□□□□ -0.7
ITGB1-201ENST00000302278 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
ITGB1-201ENST00000302278 CHIC1Q5VXU3 224 aa10.65□□□□□ -0.7
ITGB1-201ENST00000302278 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
ITGB1-201ENST00000302278 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
ITGB1-201ENST00000302278 DUOX2Q9NRD8 1548 aa10.63□□□□□ -0.71
ITGB1-201ENST00000302278 TET3O43151 1660 aa10.63□□□□□ -0.71
ITGB1-201ENST00000302278 ANKLE2Q86XL3 938 aa10.63□□□□□ -0.71
ITGB1-201ENST00000302278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
ITGB1-201ENST00000302278 SCAF11Q99590 1463 aaKnown RBP10.63□□□□□ -0.71
ITGB1-201ENST00000302278 GGT6Q6P531 493 aa10.63□□□□□ -0.71
ITGB1-201ENST00000302278 THEMISQ8N1K5 641 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-201ENST00000302278 PIK3C2BO00750 1634 aa10.62□□□□□ -0.71
ITGB1-201ENST00000302278 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-201ENST00000302278 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
ITGB1-201ENST00000302278 LRRC9Q6ZRR7 1453 aa10.6□□□□□ -0.71
ITGB1-201ENST00000302278 FAM135BQ49AJ0 1406 aa10.6□□□□□ -0.71
ITGB1-201ENST00000302278 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
ITGB1-201ENST00000302278 ROBO1Q9Y6N7 1651 aa10.59□□□□□ -0.71
ITGB1-201ENST00000302278 ERBINQ96RT1 1412 aa10.59□□□□□ -0.71
ITGB1-201ENST00000302278 NKTRP30414 1462 aaKnown RBP10.58□□□□□ -0.72
ITGB1-201ENST00000302278 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
ITGB1-201ENST00000302278 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
ITGB1-201ENST00000302278 KIF3BO15066 747 aa10.57□□□□□ -0.72
ITGB1-201ENST00000302278 ADGRB3O60242 1522 aa10.56□□□□□ -0.72
ITGB1-201ENST00000302278 RGS17Q9UGC6 210 aaPredicted RBP10.56□□□□□ -0.72
ITGB1-201ENST00000302278 SHPRHQ149N8 1683 aa10.56□□□□□ -0.72
ITGB1-201ENST00000302278 EFCAB6Q5THR3 1501 aa10.55□□□□□ -0.72
ITGB1-201ENST00000302278 COL16A1Q07092 1604 aaPredicted RBP10.54□□□□□ -0.72
ITGB1-201ENST00000302278 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
ITGB1-201ENST00000302278 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
ITGB1-201ENST00000302278 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
ITGB1-201ENST00000302278 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
ITGB1-201ENST00000302278 DIP2AQ14689 1571 aa10.52□□□□□ -0.73
ITGB1-201ENST00000302278 NOS1P29475 1434 aa10.52□□□□□ -0.73
ITGB1-201ENST00000302278 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-201ENST00000302278 NCOA3Q9Y6Q9 1424 aa10.52□□□□□ -0.73
ITGB1-201ENST00000302278 PTPN23Q9H3S7 1636 aa10.52□□□□□ -0.73
ITGB1-201ENST00000302278 GCC2Q8IWJ2 1684 aa10.52□□□□□ -0.73
ITGB1-201ENST00000302278 TMEM2Q9UHN6 1383 aa10.51□□□□□ -0.73
ITGB1-201ENST00000302278 CFAP65Q6ZU64 1925 aaKnown RBP10.51□□□□□ -0.73
ITGB1-201ENST00000302278 MYO5BQ9ULV0 1848 aa10.51□□□□□ -0.73
ITGB1-201ENST00000302278 VPS8Q8N3P4 1428 aa10.5□□□□□ -0.73
ITGB1-201ENST00000302278 RPRD2Q5VT52 1461 aaKnown RBP10.5□□□□□ -0.73
ITGB1-201ENST00000302278 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
ITGB1-201ENST00000302278 ADGRL2O95490 1459 aa10.49□□□□□ -0.73
ITGB1-201ENST00000302278 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
ITGB1-201ENST00000302278 ZFYVE9O95405 1425 aa10.48□□□□□ -0.73
ITGB1-201ENST00000302278 LTKP29376 864 aa10.48□□□□□ -0.73
ITGB1-201ENST00000302278 ABCC5O15440 1437 aa10.48□□□□□ -0.73
ITGB1-201ENST00000302278 UNC13BO14795 1591 aa10.48□□□□□ -0.73
ITGB1-201ENST00000302278 TSPY4P0CV99 314 aa10.47□□□□□ -0.73
ITGB1-201ENST00000302278 TSPY10P0CW01 314 aa10.47□□□□□ -0.73
ITGB1-201ENST00000302278 LAMC1P11047 1609 aa10.47□□□□□ -0.73
ITGB1-201ENST00000302278 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
ITGB1-201ENST00000302278 CDK12Q9NYV4 1490 aaPredicted RBP10.46□□□□□ -0.73
ITGB1-201ENST00000302278 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
ITGB1-201ENST00000302278 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.73
ITGB1-201ENST00000302278 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
ITGB1-201ENST00000302278 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.46□□□□□ -0.74
ITGB1-201ENST00000302278 DAPK1P53355 1430 aa10.45□□□□□ -0.74
ITGB1-201ENST00000302278 KCNA6P17658 529 aa10.45□□□□□ -0.74
ITGB1-201ENST00000302278 KIF15Q9NS87 1388 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms