RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 C9orf84Q5VXU9 1444 aa25.7■■□□□ 1.7
TRA2A-201ENST00000297071 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
TRA2A-201ENST00000297071 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
TRA2A-201ENST00000297071 PLB1Q6P1J6 1458 aa25.67■■□□□ 1.7
TRA2A-201ENST00000297071 TCERG1O14776 1098 aaKnown RBP25.66■■□□□ 1.7
TRA2A-201ENST00000297071 ARID3CA6NKF2 412 aa25.65■■□□□ 1.7
TRA2A-201ENST00000297071 PARD3Q8TEW0 1356 aa25.65■■□□□ 1.7
TRA2A-201ENST00000297071 CARD11Q9BXL7 1154 aa25.65■■□□□ 1.7
TRA2A-201ENST00000297071 SYNJ2O15056 1496 aa25.65■■□□□ 1.7
TRA2A-201ENST00000297071 WASHC2CQ9Y4E1 1318 aa25.65■■□□□ 1.7
TRA2A-201ENST00000297071 PAK3O75914 559 aaPredicted RBP25.64■■□□□ 1.7
TRA2A-201ENST00000297071 RRP1P56182 461 aaKnown RBP25.64■■□□□ 1.7
TRA2A-201ENST00000297071 NUP155O75694 1391 aa25.63■■□□□ 1.69
TRA2A-201ENST00000297071 MS4A1P11836 297 aa25.63■■□□□ 1.69
TRA2A-201ENST00000297071 ZBTB47Q9UFB7 747 aaPredicted RBP25.63■■□□□ 1.69
TRA2A-201ENST00000297071 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
TRA2A-201ENST00000297071 NUP160Q12769 1436 aa25.61■■□□□ 1.69
TRA2A-201ENST00000297071 GPRASP1Q5JY77 1395 aa25.6■■□□□ 1.69
TRA2A-201ENST00000297071 NLRP13Q86W25 1043 aa25.6■■□□□ 1.69
TRA2A-201ENST00000297071 EIF2AK4Q9P2K8 1649 aaKnown RBP25.59■■□□□ 1.69
TRA2A-201ENST00000297071 UNC13BO14795 1591 aa25.59■■□□□ 1.69
TRA2A-201ENST00000297071 MAST1Q9Y2H9 1570 aa25.59■■□□□ 1.69
TRA2A-201ENST00000297071 PRAG1Q86YV5 1406 aa25.57■■□□□ 1.68
TRA2A-201ENST00000297071 PRDM15P57071 1507 aaPredicted RBP25.56■■□□□ 1.68
TRA2A-201ENST00000297071 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
TRA2A-201ENST00000297071 FAM135AQ9P2D6 1515 aa25.55■■□□□ 1.68
TRA2A-201ENST00000297071 ST20-MTHFSA0A0A6YYL1 179 aa25.55■■□□□ 1.68
TRA2A-201ENST00000297071 ZNF326Q5BKZ1 582 aaKnown RBP25.55■■□□□ 1.68
TRA2A-201ENST00000297071 RCAN3Q9UKA8 241 aa25.55■■□□□ 1.68
TRA2A-201ENST00000297071 BLMP54132 1417 aaPredicted RBP25.55■■□□□ 1.68
TRA2A-201ENST00000297071 COL17A1Q9UMD9 1497 aaPredicted RBP25.54■■□□□ 1.68
TRA2A-201ENST00000297071 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
TRA2A-201ENST00000297071 ATP10BO94823 1461 aa25.53■■□□□ 1.68
TRA2A-201ENST00000297071 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
TRA2A-201ENST00000297071 RSPH4AQ5TD94 716 aa25.52■■□□□ 1.68
TRA2A-201ENST00000297071 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
TRA2A-201ENST00000297071 CCDC141Q6ZP82 1450 aa25.51■■□□□ 1.68
TRA2A-201ENST00000297071 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
TRA2A-201ENST00000297071 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
TRA2A-201ENST00000297071 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.67
TRA2A-201ENST00000297071 USP35Q9P2H5 1018 aa25.51■■□□□ 1.67
TRA2A-201ENST00000297071 PLEKHD1A6NEE1 506 aa25.5■■□□□ 1.67
TRA2A-201ENST00000297071 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
TRA2A-201ENST00000297071 IQGAP3Q86VI3 1631 aa25.49■■□□□ 1.67
TRA2A-201ENST00000297071 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
TRA2A-201ENST00000297071 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
TRA2A-201ENST00000297071 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
TRA2A-201ENST00000297071 PER1O15534 1290 aaPredicted RBP25.46■■□□□ 1.67
TRA2A-201ENST00000297071 BACH2Q9BYV9 841 aa25.46■■□□□ 1.67
TRA2A-201ENST00000297071 ATP10AO60312 1499 aa25.45■■□□□ 1.67
TRA2A-201ENST00000297071 EXOC6Q8TAG9 804 aa25.45■■□□□ 1.66
TRA2A-201ENST00000297071 NBR1Q14596 966 aa25.44■■□□□ 1.66
TRA2A-201ENST00000297071 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
TRA2A-201ENST00000297071 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
TRA2A-201ENST00000297071 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
TRA2A-201ENST00000297071 PDE4AP27815 886 aa25.42■■□□□ 1.66
TRA2A-201ENST00000297071 JPH4Q96JJ6 628 aa25.41■■□□□ 1.66
TRA2A-201ENST00000297071 A2MP01023 1474 aa25.39■■□□□ 1.66
TRA2A-201ENST00000297071 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
TRA2A-201ENST00000297071 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
TRA2A-201ENST00000297071 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
TRA2A-201ENST00000297071 MAGI2Q86UL8 1455 aa25.37■■□□□ 1.65
TRA2A-201ENST00000297071 KDM2AQ9Y2K7 1162 aa25.35■■□□□ 1.65
TRA2A-201ENST00000297071 PLA2R1Q13018 1463 aa25.35■■□□□ 1.65
TRA2A-201ENST00000297071 ILDR1Q86SU0 546 aaPredicted RBP25.35■■□□□ 1.65
TRA2A-201ENST00000297071 DDRGK1Q96HY6 314 aa25.35■■□□□ 1.65
TRA2A-201ENST00000297071 ERBINQ96RT1 1412 aa25.34■■□□□ 1.65
TRA2A-201ENST00000297071 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
TRA2A-201ENST00000297071 CNGB1Q14028 1251 aaPredicted RBP25.32■■□□□ 1.64
TRA2A-201ENST00000297071 TESK2Q96S53 571 aa25.32■■□□□ 1.64
TRA2A-201ENST00000297071 DUOX2Q9NRD8 1548 aa25.28■■□□□ 1.64
TRA2A-201ENST00000297071 SYNMO15061 1565 aa25.26■■□□□ 1.63
TRA2A-201ENST00000297071 DISP3Q9P2K9 1392 aa25.26■■□□□ 1.63
TRA2A-201ENST00000297071 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
TRA2A-201ENST00000297071 TMF1P82094 1093 aa25.25■■□□□ 1.63
TRA2A-201ENST00000297071 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
TRA2A-201ENST00000297071 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
TRA2A-201ENST00000297071 SPHKAPQ2M3C7 1700 aa25.22■■□□□ 1.63
TRA2A-201ENST00000297071 KDM2BQ8NHM5 1336 aa25.22■■□□□ 1.63
TRA2A-201ENST00000297071 MADDQ8WXG6 1647 aa25.22■■□□□ 1.63
TRA2A-201ENST00000297071 CDCA7LQ96GN5 454 aa25.21■■□□□ 1.63
TRA2A-201ENST00000297071 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
TRA2A-201ENST00000297071 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
TRA2A-201ENST00000297071 WDR7Q9Y4E6 1490 aa25.2■■□□□ 1.62
TRA2A-201ENST00000297071 NPC1L1Q9UHC9 1359 aa25.2■■□□□ 1.62
TRA2A-201ENST00000297071 NBPF1Q3BBV0 1214 aa25.2■■□□□ 1.62
TRA2A-201ENST00000297071 CEP152O94986 1710 aa25.19■■□□□ 1.62
TRA2A-201ENST00000297071 CRBNQ96SW2 442 aa25.19■■□□□ 1.62
TRA2A-201ENST00000297071 CENPQQ7L2Z9 268 aaPredicted RBP25.19■■□□□ 1.62
TRA2A-201ENST00000297071 PANK3Q9H999 370 aa25.19■■□□□ 1.62
TRA2A-201ENST00000297071 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
TRA2A-201ENST00000297071 TTC37Q6PGP7 1564 aa25.18■■□□□ 1.62
TRA2A-201ENST00000297071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.16■■□□□ 1.629e-16■■■■□ 20.9
TRA2A-201ENST00000297071 ZNF521Q96K83 1311 aa25.16■■□□□ 1.62
TRA2A-201ENST00000297071 NEURL4Q96JN8 1562 aa25.16■■□□□ 1.62
TRA2A-201ENST00000297071 EIF3AQ14152 1382 aaKnown RBP25.16■■□□□ 1.62
TRA2A-201ENST00000297071 NEFMP07197 916 aa25.16■■□□□ 1.62
TRA2A-201ENST00000297071 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
TRA2A-201ENST00000297071 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
TRA2A-201ENST00000297071 ABCC2Q92887 1545 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms