RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 SAMD9LQ8IVG5 1584 aa22.56■■□□□ 1.2
CXXC1-201ENST00000285106 ARHGEF12Q9NZN5 1544 aa22.54■■□□□ 1.2
CXXC1-201ENST00000285106 ST20-MTHFSA0A0A6YYL1 179 aa22.54■■□□□ 1.2
CXXC1-201ENST00000285106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.23e-7■■■□□ 17.2
CXXC1-201ENST00000285106 CDC42BPBQ9Y5S2 1711 aa22.53■■□□□ 1.2
CXXC1-201ENST00000285106 PREX2Q70Z35 1606 aa22.51■■□□□ 1.19
CXXC1-201ENST00000285106 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
CXXC1-201ENST00000285106 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
CXXC1-201ENST00000285106 ARHGAP5Q13017 1502 aa22.5■■□□□ 1.19
CXXC1-201ENST00000285106 FAM135AQ9P2D6 1515 aa22.5■■□□□ 1.19
CXXC1-201ENST00000285106 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
CXXC1-201ENST00000285106 CHD1O14646 1710 aa22.5■■□□□ 1.19
CXXC1-201ENST00000285106 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
CXXC1-201ENST00000285106 SYCP2Q9BX26 1530 aa22.49■■□□□ 1.19
CXXC1-201ENST00000285106 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
CXXC1-201ENST00000285106 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
CXXC1-201ENST00000285106 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
CXXC1-201ENST00000285106 ANP32AP39687 249 aaKnown RBP22.45■■□□□ 1.18
CXXC1-201ENST00000285106 IPO9Q96P70 1041 aaKnown RBP22.45■■□□□ 1.18
CXXC1-201ENST00000285106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.18
CXXC1-201ENST00000285106 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
CXXC1-201ENST00000285106 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
CXXC1-201ENST00000285106 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
CXXC1-201ENST00000285106 ABCC2Q92887 1545 aa22.4■■□□□ 1.18
CXXC1-201ENST00000285106 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
CXXC1-201ENST00000285106 PLEKHH2Q8IVE3 1493 aa22.39■■□□□ 1.18
CXXC1-201ENST00000285106 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.18
CXXC1-201ENST00000285106 NBPF1Q3BBV0 1214 aa22.39■■□□□ 1.17
CXXC1-201ENST00000285106 PRAG1Q86YV5 1406 aa22.38■■□□□ 1.17
CXXC1-201ENST00000285106 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
CXXC1-201ENST00000285106 ZBTB47Q9UFB7 747 aaPredicted RBP22.37■■□□□ 1.17
CXXC1-201ENST00000285106 MAST1Q9Y2H9 1570 aa22.36■■□□□ 1.17
CXXC1-201ENST00000285106 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
CXXC1-201ENST00000285106 RALBP1Q15311 655 aa22.34■■□□□ 1.17
CXXC1-201ENST00000285106 RTL5Q5HYW3 569 aaPredicted RBP22.33■■□□□ 1.17
CXXC1-201ENST00000285106 MYO5CQ9NQX4 1742 aa22.33■■□□□ 1.16
CXXC1-201ENST00000285106 UNC13BO14795 1591 aa22.33■■□□□ 1.16
CXXC1-201ENST00000285106 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
CXXC1-201ENST00000285106 A2MP01023 1474 aa22.31■■□□□ 1.16
CXXC1-201ENST00000285106 PLCH2O75038 1416 aa22.31■■□□□ 1.16
CXXC1-201ENST00000285106 DUOX2Q9NRD8 1548 aa22.29■■□□□ 1.16
CXXC1-201ENST00000285106 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
CXXC1-201ENST00000285106 BRD4O60885 1362 aaPredicted RBP22.28■■□□□ 1.16
CXXC1-201ENST00000285106 KTN1Q86UP2 1357 aaKnown RBP22.28■■□□□ 1.16
CXXC1-201ENST00000285106 TRPM1Q7Z4N2 1603 aa22.28■■□□□ 1.16
CXXC1-201ENST00000285106 GPRASP1Q5JY77 1395 aa22.26■■□□□ 1.15
CXXC1-201ENST00000285106 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
CXXC1-201ENST00000285106 ERBINQ96RT1 1412 aa22.25■■□□□ 1.15
CXXC1-201ENST00000285106 TRAPPC8Q9Y2L5 1435 aa22.24■■□□□ 1.15
CXXC1-201ENST00000285106 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
CXXC1-201ENST00000285106 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
CXXC1-201ENST00000285106 TESK2Q96S53 571 aa22.23■■□□□ 1.15
CXXC1-201ENST00000285106 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
CXXC1-201ENST00000285106 RRP1P56182 461 aaKnown RBP22.22■■□□□ 1.15
CXXC1-201ENST00000285106 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
CXXC1-201ENST00000285106 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
CXXC1-201ENST00000285106 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
CXXC1-201ENST00000285106 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
CXXC1-201ENST00000285106 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
CXXC1-201ENST00000285106 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
CXXC1-201ENST00000285106 ATP10AO60312 1499 aa22.2■■□□□ 1.14
CXXC1-201ENST00000285106 E9PCH4 1651 aa22.2■■□□□ 1.14
CXXC1-201ENST00000285106 MAGI2Q86UL8 1455 aa22.2■■□□□ 1.14
CXXC1-201ENST00000285106 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
CXXC1-201ENST00000285106 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
CXXC1-201ENST00000285106 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
CXXC1-201ENST00000285106 ABCC1P33527 1531 aa22.18■■□□□ 1.14
CXXC1-201ENST00000285106 TMF1P82094 1093 aa22.18■■□□□ 1.14
CXXC1-201ENST00000285106 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
CXXC1-201ENST00000285106 COL17A1Q9UMD9 1497 aaPredicted RBP22.17■■□□□ 1.14
CXXC1-201ENST00000285106 PANK3Q9H999 370 aa22.17■■□□□ 1.14
CXXC1-201ENST00000285106 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
CXXC1-201ENST00000285106 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
CXXC1-201ENST00000285106 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
CXXC1-201ENST00000285106 PDE4AP27815 886 aa22.15■■□□□ 1.14
CXXC1-201ENST00000285106 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.14
CXXC1-201ENST00000285106 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.13
CXXC1-201ENST00000285106 EIF2AK4Q9P2K8 1649 aaKnown RBP22.14■■□□□ 1.13
CXXC1-201ENST00000285106 IL27Q8NEV9 243 aa22.13■■□□□ 1.13
CXXC1-201ENST00000285106 WASHC2CQ9Y4E1 1318 aa22.12■■□□□ 1.13
CXXC1-201ENST00000285106 LAMC1P11047 1609 aa22.12■■□□□ 1.13
CXXC1-201ENST00000285106 BACH2Q9BYV9 841 aa22.11■■□□□ 1.13
CXXC1-201ENST00000285106 NEFMP07197 916 aa22.1■■□□□ 1.13
CXXC1-201ENST00000285106 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
CXXC1-201ENST00000285106 RTEL1-TNFRSF6BF6WH68 1400 aa22.09■■□□□ 1.13
CXXC1-201ENST00000285106 PRKCSHP14314 528 aaPredicted RBP22.07■■□□□ 1.12
CXXC1-201ENST00000285106 MS4A1P11836 297 aa22.06■■□□□ 1.12
CXXC1-201ENST00000285106 ZFYVE16Q7Z3T8 1539 aa22.05■■□□□ 1.12
CXXC1-201ENST00000285106 KIF3BO15066 747 aa22.05■■□□□ 1.12
CXXC1-201ENST00000285106 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
CXXC1-201ENST00000285106 PDE3BQ13370 1112 aa22.03■■□□□ 1.12
CXXC1-201ENST00000285106 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
CXXC1-201ENST00000285106 ARAP3Q8WWN8 1544 aa22.03■■□□□ 1.12
CXXC1-201ENST00000285106 KANK1Q14678 1352 aa22.02■■□□□ 1.12
CXXC1-201ENST00000285106 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
CXXC1-201ENST00000285106 RTN4Q9NQC3 1192 aaKnown RBP22.02■■□□□ 1.12
CXXC1-201ENST00000285106 FANCAO15360 1455 aa22.02■■□□□ 1.12
CXXC1-201ENST00000285106 TRPM2O94759 1503 aa22.01■■□□□ 1.11
CXXC1-201ENST00000285106 KNSTRNQ9Y448 316 aa22.01■■□□□ 1.11
CXXC1-201ENST00000285106 PTPRTO14522 1441 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms