RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
CXXC1-201ENST00000285106 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
CXXC1-201ENST00000285106 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
CXXC1-201ENST00000285106 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
CXXC1-201ENST00000285106 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
CXXC1-201ENST00000285106 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
CXXC1-201ENST00000285106 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
CXXC1-201ENST00000285106 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
CXXC1-201ENST00000285106 HRCP23327 699 aa27.88■■■□□ 2.05
CXXC1-201ENST00000285106 MYO15BQ96JP2 1530 aa27.81■■■□□ 2.04
CXXC1-201ENST00000285106 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
CXXC1-201ENST00000285106 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
CXXC1-201ENST00000285106 ABCC9O60706 1549 aa27.38■■□□□ 1.97
CXXC1-201ENST00000285106 PPARGC1BQ86YN6 1023 aaKnown RBP27.3■■□□□ 1.96
CXXC1-201ENST00000285106 RSF1Q96T23 1441 aaPredicted RBP27.22■■□□□ 1.95
CXXC1-201ENST00000285106 NACADO15069 1562 aa27.11■■□□□ 1.93
CXXC1-201ENST00000285106 LOC105371045A0A1W2PR82 267 aa27.08■■□□□ 1.93
CXXC1-201ENST00000285106 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
CXXC1-201ENST00000285106 CECR2Q9BXF3 1484 aa26.86■■□□□ 1.89
CXXC1-201ENST00000285106 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
CXXC1-201ENST00000285106 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
CXXC1-201ENST00000285106 TRIM26Q12899 539 aaPredicted RBP26.74■■□□□ 1.87
CXXC1-201ENST00000285106 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
CXXC1-201ENST00000285106 WIZO95785 1651 aa26.57■■□□□ 1.84
CXXC1-201ENST00000285106 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
CXXC1-201ENST00000285106 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
CXXC1-201ENST00000285106 ZEB1P37275 1124 aaPredicted RBP26.36■■□□□ 1.81
CXXC1-201ENST00000285106 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
CXXC1-201ENST00000285106 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
CXXC1-201ENST00000285106 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
CXXC1-201ENST00000285106 TOP2AP11388 1531 aaKnown RBP26.16■■□□□ 1.78
CXXC1-201ENST00000285106 SCAF1Q9H7N4 1312 aaKnown RBP26.12■■□□□ 1.77
CXXC1-201ENST00000285106 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
CXXC1-201ENST00000285106 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
CXXC1-201ENST00000285106 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
CXXC1-201ENST00000285106 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
CXXC1-201ENST00000285106 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
CXXC1-201ENST00000285106 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
CXXC1-201ENST00000285106 SOGA1O94964 1423 aa25.74■■□□□ 1.71
CXXC1-201ENST00000285106 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
CXXC1-201ENST00000285106 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
CXXC1-201ENST00000285106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.7
CXXC1-201ENST00000285106 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
CXXC1-201ENST00000285106 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
CXXC1-201ENST00000285106 EEA1Q15075 1411 aa25.6■■□□□ 1.69
CXXC1-201ENST00000285106 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
CXXC1-201ENST00000285106 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
CXXC1-201ENST00000285106 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
CXXC1-201ENST00000285106 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
CXXC1-201ENST00000285106 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
CXXC1-201ENST00000285106 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
CXXC1-201ENST00000285106 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
CXXC1-201ENST00000285106 BAZ1BQ9UIG0 1483 aaKnown RBP25.54■■□□□ 1.68
CXXC1-201ENST00000285106 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
CXXC1-201ENST00000285106 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
CXXC1-201ENST00000285106 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
CXXC1-201ENST00000285106 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
CXXC1-201ENST00000285106 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
CXXC1-201ENST00000285106 CENPBP07199 599 aaPredicted RBP25.32■■□□□ 1.64
CXXC1-201ENST00000285106 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
CXXC1-201ENST00000285106 KIF21BO75037 1637 aa25.19■■□□□ 1.62
CXXC1-201ENST00000285106 CLIP1P30622 1438 aa25.15■■□□□ 1.62
CXXC1-201ENST00000285106 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
CXXC1-201ENST00000285106 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
CXXC1-201ENST00000285106 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
CXXC1-201ENST00000285106 RANGAP1P46060 587 aaPredicted RBP25.1■■□□□ 1.61
CXXC1-201ENST00000285106 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
CXXC1-201ENST00000285106 ZNF316A6NFI3 1004 aaPredicted RBP25.02■■□□□ 1.6
CXXC1-201ENST00000285106 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
CXXC1-201ENST00000285106 APLP2Q06481 763 aa25.01■■□□□ 1.59
CXXC1-201ENST00000285106 MYT1Q01538 1121 aa24.99■■□□□ 1.59
CXXC1-201ENST00000285106 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
CXXC1-201ENST00000285106 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
CXXC1-201ENST00000285106 YTHDC1Q96MU7 727 aaKnown RBP24.91■■□□□ 1.58
CXXC1-201ENST00000285106 CUX1P39880 1505 aa24.9■■□□□ 1.58
CXXC1-201ENST00000285106 CFTRP13569 1480 aa24.89■■□□□ 1.57
CXXC1-201ENST00000285106 PRXQ9BXM0 1461 aa24.87■■□□□ 1.57
CXXC1-201ENST00000285106 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
CXXC1-201ENST00000285106 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.56
CXXC1-201ENST00000285106 MIER1Q8N108 512 aa24.8■■□□□ 1.56
CXXC1-201ENST00000285106 ARAP1Q96P48 1450 aa24.7■■□□□ 1.55
CXXC1-201ENST00000285106 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
CXXC1-201ENST00000285106 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
CXXC1-201ENST00000285106 CUX2O14529 1486 aa24.6■■□□□ 1.53
CXXC1-201ENST00000285106 IGF1RP08069 1367 aa24.56■■□□□ 1.52
CXXC1-201ENST00000285106 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
CXXC1-201ENST00000285106 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
CXXC1-201ENST00000285106 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
CXXC1-201ENST00000285106 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
CXXC1-201ENST00000285106 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
CXXC1-201ENST00000285106 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
CXXC1-201ENST00000285106 RRBP1Q9P2E9 1410 aaKnown RBP24.4■■□□□ 1.5
CXXC1-201ENST00000285106 DHX57Q6P158 1386 aaKnown RBP24.36■■□□□ 1.49
CXXC1-201ENST00000285106 CCNB3Q8WWL7 1395 aa24.35■■□□□ 1.49
CXXC1-201ENST00000285106 CLSPNQ9HAW4 1339 aa24.34■■□□□ 1.49
CXXC1-201ENST00000285106 ITGAEP38570 1179 aa24.33■■□□□ 1.49
CXXC1-201ENST00000285106 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
CXXC1-201ENST00000285106 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
CXXC1-201ENST00000285106 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
CXXC1-201ENST00000285106 NESP48681 1621 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms