RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
TCF3-201ENST00000262965 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
TCF3-201ENST00000262965 KANK1Q14678 1352 aa17.09■□□□□ 0.33
TCF3-201ENST00000262965 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.33
TCF3-201ENST00000262965 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
TCF3-201ENST00000262965 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.32
TCF3-201ENST00000262965 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
TCF3-201ENST00000262965 MCCP23508 829 aa17.08■□□□□ 0.32
TCF3-201ENST00000262965 FAM161AQ3B820 660 aa17.08■□□□□ 0.32
TCF3-201ENST00000262965 DRC7Q8IY82 874 aa17.08■□□□□ 0.32
TCF3-201ENST00000262965 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
TCF3-201ENST00000262965 KIF15Q9NS87 1388 aa17.07■□□□□ 0.32
TCF3-201ENST00000262965 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
TCF3-201ENST00000262965 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
TCF3-201ENST00000262965 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
TCF3-201ENST00000262965 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
TCF3-201ENST00000262965 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
TCF3-201ENST00000262965 PTPRGP23470 1445 aa17.06■□□□□ 0.32
TCF3-201ENST00000262965 APAF1O14727 1248 aa17.06■□□□□ 0.32
TCF3-201ENST00000262965 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
TCF3-201ENST00000262965 KIF3BO15066 747 aa17.06■□□□□ 0.32
TCF3-201ENST00000262965 USP47Q96K76 1375 aa17.05■□□□□ 0.32
TCF3-201ENST00000262965 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
TCF3-201ENST00000262965 TULP1O00294 542 aaPredicted RBP17.04■□□□□ 0.32
TCF3-201ENST00000262965 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
TCF3-201ENST00000262965 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
TCF3-201ENST00000262965 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
TCF3-201ENST00000262965 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
TCF3-201ENST00000262965 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
TCF3-201ENST00000262965 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
TCF3-201ENST00000262965 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
TCF3-201ENST00000262965 SLC4A10Q6U841 1118 aa17.02■□□□□ 0.31
TCF3-201ENST00000262965 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
TCF3-201ENST00000262965 KIAA1211Q6ZU35 1233 aa17.01■□□□□ 0.31
TCF3-201ENST00000262965 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
TCF3-201ENST00000262965 WASHC2AQ641Q2 1341 aa17■□□□□ 0.31
TCF3-201ENST00000262965 FOXD4L6Q3SYB3 417 aaPredicted RBP17■□□□□ 0.31
TCF3-201ENST00000262965 FOXD4L3Q6VB84 417 aaPredicted RBP17■□□□□ 0.31
TCF3-201ENST00000262965 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
TCF3-201ENST00000262965 NRDCO43847 1150 aa16.99■□□□□ 0.31
TCF3-201ENST00000262965 RSPH4AQ5TD94 716 aa16.98■□□□□ 0.31
TCF3-201ENST00000262965 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
TCF3-201ENST00000262965 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
TCF3-201ENST00000262965 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
TCF3-201ENST00000262965 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
TCF3-201ENST00000262965 CCDC7Q96M83 1385 aa16.96■□□□□ 0.31
TCF3-201ENST00000262965 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
TCF3-201ENST00000262965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.3
TCF3-201ENST00000262965 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
TCF3-201ENST00000262965 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
TCF3-201ENST00000262965 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
TCF3-201ENST00000262965 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
TCF3-201ENST00000262965 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
TCF3-201ENST00000262965 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
TCF3-201ENST00000262965 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
TCF3-201ENST00000262965 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
TCF3-201ENST00000262965 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
TCF3-201ENST00000262965 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
TCF3-201ENST00000262965 E9PSI1 815 aa16.92■□□□□ 0.3
TCF3-201ENST00000262965 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
TCF3-201ENST00000262965 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
TCF3-201ENST00000262965 CGNL1Q0VF96 1302 aa16.91■□□□□ 0.3
TCF3-201ENST00000262965 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
TCF3-201ENST00000262965 PTMSP20962 102 aa16.9■□□□□ 0.3
TCF3-201ENST00000262965 VSIG10Q8N0Z9 540 aa16.9■□□□□ 0.3
TCF3-201ENST00000262965 ZKSCAN2Q63HK3 967 aa16.9■□□□□ 0.3
TCF3-201ENST00000262965 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
TCF3-201ENST00000262965 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
TCF3-201ENST00000262965 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
TCF3-201ENST00000262965 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
TCF3-201ENST00000262965 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
TCF3-201ENST00000262965 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
TCF3-201ENST00000262965 DDX11L8A8MPP1 907 aa16.88■□□□□ 0.29
TCF3-201ENST00000262965 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
TCF3-201ENST00000262965 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
TCF3-201ENST00000262965 HMMRO75330 724 aa16.87■□□□□ 0.29
TCF3-201ENST00000262965 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
TCF3-201ENST00000262965 ST18O60284 1047 aa16.86■□□□□ 0.29
TCF3-201ENST00000262965 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
TCF3-201ENST00000262965 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
TCF3-201ENST00000262965 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
TCF3-201ENST00000262965 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
TCF3-201ENST00000262965 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
TCF3-201ENST00000262965 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
TCF3-201ENST00000262965 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
TCF3-201ENST00000262965 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
TCF3-201ENST00000262965 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
TCF3-201ENST00000262965 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
TCF3-201ENST00000262965 RILPL2Q969X0 211 aa16.84■□□□□ 0.29
TCF3-201ENST00000262965 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
TCF3-201ENST00000262965 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
TCF3-201ENST00000262965 LNPKQ9C0E8 428 aa16.83■□□□□ 0.29
TCF3-201ENST00000262965 WASHC2CQ9Y4E1 1318 aa16.83■□□□□ 0.28
TCF3-201ENST00000262965 UACAQ9BZF9 1416 aa16.82■□□□□ 0.28
TCF3-201ENST00000262965 FRAT2O75474 233 aaPredicted RBP16.82■□□□□ 0.28
TCF3-201ENST00000262965 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
TCF3-201ENST00000262965 NPHP1O15259 732 aa16.81■□□□□ 0.28
TCF3-201ENST00000262965 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
TCF3-201ENST00000262965 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
TCF3-201ENST00000262965 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms