RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 NOP58Q9Y2X3 529 aaKnown RBP26■■□□□ 1.75
SCARB1-201ENST00000261693 LRPPRCP42704 1394 aaKnown RBP25.99■■□□□ 1.75
SCARB1-201ENST00000261693 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
SCARB1-201ENST00000261693 RALBP1Q15311 655 aa25.98■■□□□ 1.75
SCARB1-201ENST00000261693 ABCA8O94911 1581 aa25.97■■□□□ 1.75
SCARB1-201ENST00000261693 KDM5DQ9BY66 1539 aa25.97■■□□□ 1.75
SCARB1-201ENST00000261693 NUP160Q12769 1436 aa25.96■■□□□ 1.75
SCARB1-201ENST00000261693 RGL3Q3MIN7 710 aa25.96■■□□□ 1.75
SCARB1-201ENST00000261693 NBR1Q14596 966 aa25.93■■□□□ 1.74
SCARB1-201ENST00000261693 PTPRGP23470 1445 aa25.93■■□□□ 1.74
SCARB1-201ENST00000261693 NBPF1Q3BBV0 1214 aa25.91■■□□□ 1.74
SCARB1-201ENST00000261693 E9PCH4 1651 aa25.91■■□□□ 1.74
SCARB1-201ENST00000261693 RRP1P56182 461 aaKnown RBP25.9■■□□□ 1.74
SCARB1-201ENST00000261693 EXOC6Q8TAG9 804 aa25.89■■□□□ 1.74
SCARB1-201ENST00000261693 KTN1Q86UP2 1357 aaKnown RBP25.89■■□□□ 1.74
SCARB1-201ENST00000261693 FAM135AQ9P2D6 1515 aa25.89■■□□□ 1.74
SCARB1-201ENST00000261693 ANP32AP39687 249 aaKnown RBP25.89■■□□□ 1.73
SCARB1-201ENST00000261693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.88■■□□□ 1.73
SCARB1-201ENST00000261693 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
SCARB1-201ENST00000261693 RCAN3Q9UKA8 241 aa25.87■■□□□ 1.73
SCARB1-201ENST00000261693 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
SCARB1-201ENST00000261693 PRAG1Q86YV5 1406 aa25.86■■□□□ 1.73
SCARB1-201ENST00000261693 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
SCARB1-201ENST00000261693 DEKP35659 375 aaKnown RBP25.84■■□□□ 1.73
SCARB1-201ENST00000261693 IPO9Q96P70 1041 aaKnown RBP25.84■■□□□ 1.73
SCARB1-201ENST00000261693 CC2D1BQ5T0F9 858 aaKnown RBP25.84■■□□□ 1.73
SCARB1-201ENST00000261693 CCDC141Q6ZP82 1450 aa25.84■■□□□ 1.73
SCARB1-201ENST00000261693 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
SCARB1-201ENST00000261693 TRPM1Q7Z4N2 1603 aa25.83■■□□□ 1.73
SCARB1-201ENST00000261693 PARD3Q8TEW0 1356 aa25.83■■□□□ 1.73
SCARB1-201ENST00000261693 CDCA7LQ96GN5 454 aa25.82■■□□□ 1.72
SCARB1-201ENST00000261693 CDC42BPBQ9Y5S2 1711 aa25.82■■□□□ 1.72
SCARB1-201ENST00000261693 PER1O15534 1290 aaPredicted RBP25.81■■□□□ 1.72
SCARB1-201ENST00000261693 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
SCARB1-201ENST00000261693 ZBTB47Q9UFB7 747 aaPredicted RBP25.78■■□□□ 1.72
SCARB1-201ENST00000261693 DISP3Q9P2K9 1392 aa25.77■■□□□ 1.72
SCARB1-201ENST00000261693 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
SCARB1-201ENST00000261693 NPM2Q86SE8 214 aaKnown RBP25.76■■□□□ 1.71
SCARB1-201ENST00000261693 A2MP01023 1474 aa25.75■■□□□ 1.71
SCARB1-201ENST00000261693 PREX2Q70Z35 1606 aa25.75■■□□□ 1.71
SCARB1-201ENST00000261693 PANK3Q9H999 370 aa25.74■■□□□ 1.71
SCARB1-201ENST00000261693 SYCP2Q9BX26 1530 aa25.74■■□□□ 1.71
SCARB1-201ENST00000261693 PLIN1O60240 522 aa25.74■■□□□ 1.71
SCARB1-201ENST00000261693 TESK2Q96S53 571 aa25.74■■□□□ 1.71
SCARB1-201ENST00000261693 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
SCARB1-201ENST00000261693 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
SCARB1-201ENST00000261693 COL17A1Q9UMD9 1497 aaPredicted RBP25.71■■□□□ 1.71
SCARB1-201ENST00000261693 GPRASP1Q5JY77 1395 aa25.69■■□□□ 1.7
SCARB1-201ENST00000261693 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
SCARB1-201ENST00000261693 MYO5CQ9NQX4 1742 aa25.68■■□□□ 1.7
SCARB1-201ENST00000261693 TCERG1O14776 1098 aaKnown RBP25.67■■□□□ 1.7
SCARB1-201ENST00000261693 PLEKHH2Q8IVE3 1493 aa25.67■■□□□ 1.7
SCARB1-201ENST00000261693 ERBINQ96RT1 1412 aa25.67■■□□□ 1.7
SCARB1-201ENST00000261693 PRDM15P57071 1507 aaPredicted RBP25.66■■□□□ 1.7
SCARB1-201ENST00000261693 TTC37Q6PGP7 1564 aa25.66■■□□□ 1.7
SCARB1-201ENST00000261693 PDE4AP27815 886 aa25.66■■□□□ 1.7
SCARB1-201ENST00000261693 UNC13BO14795 1591 aa25.65■■□□□ 1.7
SCARB1-201ENST00000261693 TMF1P82094 1093 aa25.64■■□□□ 1.7
SCARB1-201ENST00000261693 SKAP1Q86WV1 359 aa25.64■■□□□ 1.7
SCARB1-201ENST00000261693 WASHC2CQ9Y4E1 1318 aa25.62■■□□□ 1.69
SCARB1-201ENST00000261693 BLMP54132 1417 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-201ENST00000261693 CRBNQ96SW2 442 aa25.61■■□□□ 1.69
SCARB1-201ENST00000261693 RTL5Q5HYW3 569 aaPredicted RBP25.6■■□□□ 1.69
SCARB1-201ENST00000261693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.6■■□□□ 1.692e-7■■■■□ 22.7
SCARB1-201ENST00000261693 BACH2Q9BYV9 841 aa25.59■■□□□ 1.69
SCARB1-201ENST00000261693 LAMC1P11047 1609 aa25.59■■□□□ 1.69
SCARB1-201ENST00000261693 IQGAP3Q86VI3 1631 aa25.58■■□□□ 1.69
SCARB1-201ENST00000261693 ADAMTS8Q9UP79 889 aa25.58■■□□□ 1.69
SCARB1-201ENST00000261693 MAST1Q9Y2H9 1570 aa25.57■■□□□ 1.68
SCARB1-201ENST00000261693 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
SCARB1-201ENST00000261693 C20orf194Q5TEA3 1177 aa25.55■■□□□ 1.68
SCARB1-201ENST00000261693 MS4A1P11836 297 aa25.53■■□□□ 1.68
SCARB1-201ENST00000261693 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
SCARB1-201ENST00000261693 PLXNC1O60486 1568 aa25.52■■□□□ 1.68
SCARB1-201ENST00000261693 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
SCARB1-201ENST00000261693 KNSTRNQ9Y448 316 aa25.5■■□□□ 1.67
SCARB1-201ENST00000261693 DUOX2Q9NRD8 1548 aa25.5■■□□□ 1.67
SCARB1-201ENST00000261693 MAGI2Q86UL8 1455 aa25.49■■□□□ 1.67
SCARB1-201ENST00000261693 INSRP06213 1382 aa25.48■■□□□ 1.67
SCARB1-201ENST00000261693 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
SCARB1-201ENST00000261693 WDR43Q15061 677 aaKnown RBP eCLIP25.48■■□□□ 1.678e-6■■□□□ 11.7
SCARB1-201ENST00000261693 ATP10AO60312 1499 aa25.47■■□□□ 1.67
SCARB1-201ENST00000261693 WDR7Q9Y4E6 1490 aa25.46■■□□□ 1.67
SCARB1-201ENST00000261693 PLEKHH1Q9ULM0 1364 aa25.46■■□□□ 1.67
SCARB1-201ENST00000261693 RNF17Q9BXT8 1623 aaKnown RBP25.45■■□□□ 1.66
SCARB1-201ENST00000261693 CHD1O14646 1710 aa25.44■■□□□ 1.66
SCARB1-201ENST00000261693 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
SCARB1-201ENST00000261693 AMER1Q5JTC6 1135 aaPredicted RBP25.42■■□□□ 1.66
SCARB1-201ENST00000261693 DUSP27Q5VZP5 1158 aa25.42■■□□□ 1.66
SCARB1-201ENST00000261693 NEFMP07197 916 aa25.41■■□□□ 1.66
SCARB1-201ENST00000261693 MADDQ8WXG6 1647 aa25.39■■□□□ 1.65
SCARB1-201ENST00000261693 TRAPPC8Q9Y2L5 1435 aa25.38■■□□□ 1.65
SCARB1-201ENST00000261693 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
SCARB1-201ENST00000261693 ABCC2Q92887 1545 aa25.38■■□□□ 1.65
SCARB1-201ENST00000261693 CCDC146Q8IYE0 955 aa25.38■■□□□ 1.65
SCARB1-201ENST00000261693 GOLGA2Q08379 1002 aa25.36■■□□□ 1.65
SCARB1-201ENST00000261693 IQGAP1P46940 1657 aa25.36■■□□□ 1.65
SCARB1-201ENST00000261693 PLCH2O75038 1416 aa25.36■■□□□ 1.65
SCARB1-201ENST00000261693 KDM2BQ8NHM5 1336 aa25.36■■□□□ 1.65
SCARB1-201ENST00000261693 AFAP1Q8N556 730 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms