RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 PSME1Q06323 249 aa13.75□□□□□ -0.21
URB2-201ENST00000258243 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
URB2-201ENST00000258243 NAP1L2Q9ULW6 460 aaPredicted RBP13.75□□□□□ -0.21
URB2-201ENST00000258243 CUX1P39880 1505 aa13.75□□□□□ -0.21
URB2-201ENST00000258243 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
URB2-201ENST00000258243 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
URB2-201ENST00000258243 G3V3G9 751 aa13.74□□□□□ -0.21
URB2-201ENST00000258243 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
URB2-201ENST00000258243 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
URB2-201ENST00000258243 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
URB2-201ENST00000258243 NRDCO43847 1150 aa13.74□□□□□ -0.21
URB2-201ENST00000258243 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
URB2-201ENST00000258243 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
URB2-201ENST00000258243 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
URB2-201ENST00000258243 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
URB2-201ENST00000258243 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
URB2-201ENST00000258243 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
URB2-201ENST00000258243 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
URB2-201ENST00000258243 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
URB2-201ENST00000258243 APPP05067 770 aa13.72□□□□□ -0.21
URB2-201ENST00000258243 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
URB2-201ENST00000258243 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
URB2-201ENST00000258243 MSH5O43196 834 aa13.7□□□□□ -0.22
URB2-201ENST00000258243 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
URB2-201ENST00000258243 CGNL1Q0VF96 1302 aa13.69□□□□□ -0.22
URB2-201ENST00000258243 MCCP23508 829 aa13.68□□□□□ -0.22
URB2-201ENST00000258243 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
URB2-201ENST00000258243 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
URB2-201ENST00000258243 IPO9Q96P70 1041 aaKnown RBP13.67□□□□□ -0.22
URB2-201ENST00000258243 ZNF644Q9H582 1327 aaPredicted RBP13.67□□□□□ -0.22
URB2-201ENST00000258243 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
URB2-201ENST00000258243 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
URB2-201ENST00000258243 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
URB2-201ENST00000258243 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
URB2-201ENST00000258243 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
URB2-201ENST00000258243 MSNP26038 577 aaKnown RBP13.66□□□□□ -0.22
URB2-201ENST00000258243 ITPRIPQ8IWB1 547 aa13.66□□□□□ -0.22
URB2-201ENST00000258243 APBB1O00213 710 aa13.65□□□□□ -0.22
URB2-201ENST00000258243 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
URB2-201ENST00000258243 FYCO1Q9BQS8 1478 aa13.65□□□□□ -0.22
URB2-201ENST00000258243 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
URB2-201ENST00000258243 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
URB2-201ENST00000258243 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
URB2-201ENST00000258243 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
URB2-201ENST00000258243 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
URB2-201ENST00000258243 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
URB2-201ENST00000258243 TXNDC2Q86VQ3 553 aa13.64□□□□□ -0.23
URB2-201ENST00000258243 PLEKHH2Q8IVE3 1493 aa13.63□□□□□ -0.23
URB2-201ENST00000258243 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
URB2-201ENST00000258243 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
URB2-201ENST00000258243 PANK3Q9H999 370 aa13.63□□□□□ -0.23
URB2-201ENST00000258243 GPATCH3Q96I76 525 aa13.63□□□□□ -0.23
URB2-201ENST00000258243 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
URB2-201ENST00000258243 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
URB2-201ENST00000258243 TEFQ10587 303 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
URB2-201ENST00000258243 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
URB2-201ENST00000258243 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
URB2-201ENST00000258243 GOLGA6L1Q8N7Z2 621 aa13.61□□□□□ -0.23
URB2-201ENST00000258243 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
URB2-201ENST00000258243 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
URB2-201ENST00000258243 HMMRO75330 724 aa13.6□□□□□ -0.23
URB2-201ENST00000258243 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
URB2-201ENST00000258243 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
URB2-201ENST00000258243 EFCAB5A4FU69 1503 aa13.59□□□□□ -0.23
URB2-201ENST00000258243 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
URB2-201ENST00000258243 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
URB2-201ENST00000258243 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
URB2-201ENST00000258243 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.23
URB2-201ENST00000258243 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.24
URB2-201ENST00000258243 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
URB2-201ENST00000258243 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
URB2-201ENST00000258243 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
URB2-201ENST00000258243 KIF21BO75037 1637 aa13.58□□□□□ -0.24
URB2-201ENST00000258243 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
URB2-201ENST00000258243 MIA2Q96PC5 1412 aa13.57□□□□□ -0.24
URB2-201ENST00000258243 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
URB2-201ENST00000258243 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
URB2-201ENST00000258243 USP47Q96K76 1375 aa13.57□□□□□ -0.24
URB2-201ENST00000258243 GNL2Q13823 731 aaKnown RBP13.56□□□□□ -0.24
URB2-201ENST00000258243 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
URB2-201ENST00000258243 MYBBP1AQ9BQG0 1328 aaKnown RBP13.55□□□□□ -0.24
URB2-201ENST00000258243 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
URB2-201ENST00000258243 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
URB2-201ENST00000258243 RRBP1Q9P2E9 1410 aaKnown RBP13.55□□□□□ -0.24
URB2-201ENST00000258243 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
URB2-201ENST00000258243 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
URB2-201ENST00000258243 HECW1Q76N89 1606 aa13.54□□□□□ -0.24
URB2-201ENST00000258243 CLSTN1O94985 981 aa13.54□□□□□ -0.24
URB2-201ENST00000258243 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms