RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
URB2-201ENST00000258243 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
URB2-201ENST00000258243 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
URB2-201ENST00000258243 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
URB2-201ENST00000258243 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
URB2-201ENST00000258243 MYT1Q01538 1121 aa17.46■□□□□ 0.39
URB2-201ENST00000258243 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
URB2-201ENST00000258243 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
URB2-201ENST00000258243 APLP2Q06481 763 aa17.18■□□□□ 0.34
URB2-201ENST00000258243 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
URB2-201ENST00000258243 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
URB2-201ENST00000258243 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
URB2-201ENST00000258243 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
URB2-201ENST00000258243 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
URB2-201ENST00000258243 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
URB2-201ENST00000258243 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
URB2-201ENST00000258243 ABCC9O60706 1549 aa16.6■□□□□ 0.25
URB2-201ENST00000258243 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
URB2-201ENST00000258243 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
URB2-201ENST00000258243 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
URB2-201ENST00000258243 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
URB2-201ENST00000258243 CENPBP07199 599 aaPredicted RBP16.34■□□□□ 0.21
URB2-201ENST00000258243 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
URB2-201ENST00000258243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
URB2-201ENST00000258243 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
URB2-201ENST00000258243 HRCP23327 699 aa16.2■□□□□ 0.18
URB2-201ENST00000258243 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
URB2-201ENST00000258243 ITGAEP38570 1179 aa15.95■□□□□ 0.14
URB2-201ENST00000258243 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
URB2-201ENST00000258243 FBLN2P98095 1184 aa15.93■□□□□ 0.14
URB2-201ENST00000258243 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
URB2-201ENST00000258243 NEFLP07196 543 aa15.86■□□□□ 0.13
URB2-201ENST00000258243 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
URB2-201ENST00000258243 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
URB2-201ENST00000258243 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
URB2-201ENST00000258243 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.1
URB2-201ENST00000258243 FAM50AQ14320 339 aaKnown RBP15.67■□□□□ 0.1
URB2-201ENST00000258243 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
URB2-201ENST00000258243 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
URB2-201ENST00000258243 RTL5Q5HYW3 569 aaPredicted RBP15.59■□□□□ 0.09
URB2-201ENST00000258243 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
URB2-201ENST00000258243 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
URB2-201ENST00000258243 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.07
URB2-201ENST00000258243 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
URB2-201ENST00000258243 GLIPR1L2Q4G1C9 344 aa15.49■□□□□ 0.07
URB2-201ENST00000258243 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
URB2-201ENST00000258243 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
URB2-201ENST00000258243 P3H3Q8IVL6 736 aa15.48■□□□□ 0.07
URB2-201ENST00000258243 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
URB2-201ENST00000258243 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
URB2-201ENST00000258243 BCANQ96GW7 911 aa15.43■□□□□ 0.06
URB2-201ENST00000258243 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
URB2-201ENST00000258243 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
URB2-201ENST00000258243 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
URB2-201ENST00000258243 ZNF777Q9ULD5 760 aaPredicted RBP15.38■□□□□ 0.05
URB2-201ENST00000258243 NACADO15069 1562 aa15.32■□□□□ 0.04
URB2-201ENST00000258243 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
URB2-201ENST00000258243 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
URB2-201ENST00000258243 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
URB2-201ENST00000258243 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
URB2-201ENST00000258243 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
URB2-201ENST00000258243 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
URB2-201ENST00000258243 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
URB2-201ENST00000258243 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
URB2-201ENST00000258243 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
URB2-201ENST00000258243 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
URB2-201ENST00000258243 CHGAP10645 457 aaKnown RBP15.13■□□□□ 0.01
URB2-201ENST00000258243 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
URB2-201ENST00000258243 NEFMP07197 916 aa15.08■□□□□ 0.01
URB2-201ENST00000258243 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
URB2-201ENST00000258243 TSPY4P0CV99 314 aa15.01□□□□□ -0.01
URB2-201ENST00000258243 TSPY10P0CW01 314 aa15.01□□□□□ -0.01
URB2-201ENST00000258243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
URB2-201ENST00000258243 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
URB2-201ENST00000258243 ANP32CO43423 234 aa14.98□□□□□ -0.01
URB2-201ENST00000258243 KCNH8Q96L42 1107 aa14.98□□□□□ -0.01
URB2-201ENST00000258243 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.01
URB2-201ENST00000258243 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
URB2-201ENST00000258243 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
URB2-201ENST00000258243 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
URB2-201ENST00000258243 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
URB2-201ENST00000258243 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
URB2-201ENST00000258243 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
URB2-201ENST00000258243 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
URB2-201ENST00000258243 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
URB2-201ENST00000258243 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
URB2-201ENST00000258243 TONSLQ96HA7 1378 aa14.87□□□□□ -0.03
URB2-201ENST00000258243 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
URB2-201ENST00000258243 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.03
URB2-201ENST00000258243 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
URB2-201ENST00000258243 EEA1Q15075 1411 aa14.82□□□□□ -0.04
URB2-201ENST00000258243 CLIP1P30622 1438 aa14.82□□□□□ -0.04
URB2-201ENST00000258243 C14orf37Q86TY3 774 aa14.77□□□□□ -0.04
URB2-201ENST00000258243 GOLGA3Q08378 1498 aa14.77□□□□□ -0.04
URB2-201ENST00000258243 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.05
URB2-201ENST00000258243 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
URB2-201ENST00000258243 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
URB2-201ENST00000258243 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
URB2-201ENST00000258243 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
URB2-201ENST00000258243 CFDP1Q9UEE9 299 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms