RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
RARA-201ENST00000254066 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
RARA-201ENST00000254066 FRAT1Q92837 279 aaPredicted RBP26.96■■□□□ 1.91
RARA-201ENST00000254066 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
RARA-201ENST00000254066 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
RARA-201ENST00000254066 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.9
RARA-201ENST00000254066 ABCC2Q92887 1545 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 MBD5Q9P267 1494 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 KIF15Q9NS87 1388 aa26.94■■□□□ 1.9
RARA-201ENST00000254066 CHIC2Q9UKJ5 165 aa26.91■■□□□ 1.9
RARA-201ENST00000254066 DIP2BQ9P265 1576 aa26.9■■□□□ 1.9
RARA-201ENST00000254066 USP47Q96K76 1375 aa26.9■■□□□ 1.9
RARA-201ENST00000254066 RALBP1Q15311 655 aa26.89■■□□□ 1.9
RARA-201ENST00000254066 KDM5CP41229 1560 aa26.89■■□□□ 1.9
RARA-201ENST00000254066 FAM69CQ0P6D2 419 aa26.89■■□□□ 1.89
RARA-201ENST00000254066 MYBBP1AQ9BQG0 1328 aaKnown RBP26.89■■□□□ 1.89
RARA-201ENST00000254066 KIF14Q15058 1648 aa26.88■■□□□ 1.89
RARA-201ENST00000254066 MAGI3Q5TCQ9 1506 aa26.88■■□□□ 1.89
RARA-201ENST00000254066 INSRP06213 1382 aa26.86■■□□□ 1.89
RARA-201ENST00000254066 PLB1Q6P1J6 1458 aa26.84■■□□□ 1.89
RARA-201ENST00000254066 FOXD1Q16676 465 aa26.83■■□□□ 1.89
RARA-201ENST00000254066 ZMYM4Q5VZL5 1548 aa26.83■■□□□ 1.89
RARA-201ENST00000254066 ASXL2Q76L83 1435 aa26.78■■□□□ 1.88
RARA-201ENST00000254066 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 E9PCH4 1651 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 GLI2P10070 1586 aa26.75■■□□□ 1.87
RARA-201ENST00000254066 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
RARA-201ENST00000254066 DAPK1P53355 1430 aa26.74■■□□□ 1.87
RARA-201ENST00000254066 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
RARA-201ENST00000254066 GLIPR1L2Q4G1C9 344 aa26.74■■□□□ 1.87
RARA-201ENST00000254066 RALGAPBQ86X10 1494 aa26.73■■□□□ 1.87
RARA-201ENST00000254066 FAM161AQ3B820 660 aa26.73■■□□□ 1.87
RARA-201ENST00000254066 KDM2BQ8NHM5 1336 aa26.72■■□□□ 1.87
RARA-201ENST00000254066 PLEKHH2Q8IVE3 1493 aa26.71■■□□□ 1.87
RARA-201ENST00000254066 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
RARA-201ENST00000254066 CENPQQ7L2Z9 268 aaPredicted RBP26.7■■□□□ 1.87
RARA-201ENST00000254066 NLRP13Q86W25 1043 aa26.7■■□□□ 1.87
RARA-201ENST00000254066 ABCA8O94911 1581 aa26.7■■□□□ 1.86
RARA-201ENST00000254066 POLR3GLQ9BT43 218 aa26.68■■□□□ 1.86
RARA-201ENST00000254066 PZPP20742 1482 aa26.68■■□□□ 1.86
RARA-201ENST00000254066 CRBNQ96SW2 442 aa26.67■■□□□ 1.86
RARA-201ENST00000254066 FRAT2O75474 233 aaPredicted RBP26.66■■□□□ 1.86
RARA-201ENST00000254066 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
RARA-201ENST00000254066 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 CNGB1Q14028 1251 aaPredicted RBP26.65■■□□□ 1.86
RARA-201ENST00000254066 DCAF11Q8TEB1 546 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 PARD3Q8TEW0 1356 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 ABCC5O15440 1437 aa26.65■■□□□ 1.86
RARA-201ENST00000254066 SLC4A3P48751 1232 aa26.64■■□□□ 1.85
RARA-201ENST00000254066 C8orf34Q49A92 452 aa26.64■■□□□ 1.85
RARA-201ENST00000254066 BLMP54132 1417 aaPredicted RBP26.63■■□□□ 1.85
RARA-201ENST00000254066 ARHGEF12Q9NZN5 1544 aa26.63■■□□□ 1.85
RARA-201ENST00000254066 L1TD1Q5T7N2 865 aaKnown RBP26.62■■□□□ 1.85
RARA-201ENST00000254066 SENP3-EIF4A1A0A087X0R7 540 aa26.61■■□□□ 1.85
RARA-201ENST00000254066 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
RARA-201ENST00000254066 TSPOAP1O95153 1857 aa26.6■■□□□ 1.85
RARA-201ENST00000254066 MAP3K4Q9Y6R4 1608 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 CDCA7LQ96GN5 454 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 PLIN1O60240 522 aa26.55■■□□□ 1.84
RARA-201ENST00000254066 CARD11Q9BXL7 1154 aa26.53■■□□□ 1.84
RARA-201ENST00000254066 PPRC1Q5VV67 1664 aaKnown RBP26.52■■□□□ 1.84
RARA-201ENST00000254066 SKAP1Q86WV1 359 aa26.5■■□□□ 1.83
RARA-201ENST00000254066 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
RARA-201ENST00000254066 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
RARA-201ENST00000254066 PDE4CQ08493 712 aa26.48■■□□□ 1.83
RARA-201ENST00000254066 ZMYND15Q9H091 742 aa26.48■■□□□ 1.83
RARA-201ENST00000254066 RRAGDQ9NQL2 400 aaPredicted RBP26.48■■□□□ 1.83
RARA-201ENST00000254066 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
RARA-201ENST00000254066 ZNF326Q5BKZ1 582 aaKnown RBP26.47■■□□□ 1.83
RARA-201ENST00000254066 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
RARA-201ENST00000254066 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
RARA-201ENST00000254066 ADGRL2O95490 1459 aa26.46■■□□□ 1.83
RARA-201ENST00000254066 ATP10BO94823 1461 aa26.45■■□□□ 1.82
RARA-201ENST00000254066 ST20-MTHFSA0A0A6YYL1 179 aa26.45■■□□□ 1.82
RARA-201ENST00000254066 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
RARA-201ENST00000254066 RRP9O43818 475 aaKnown RBP26.43■■□□□ 1.82
RARA-201ENST00000254066 BECN1Q14457 450 aa26.43■■□□□ 1.82
RARA-201ENST00000254066 PER1O15534 1290 aaPredicted RBP26.41■■□□□ 1.82
RARA-201ENST00000254066 PDIA4P13667 645 aaKnown RBP26.41■■□□□ 1.82
RARA-201ENST00000254066 C20orf194Q5TEA3 1177 aa26.4■■□□□ 1.82
RARA-201ENST00000254066 POGKQ9P215 609 aa26.4■■□□□ 1.82
RARA-201ENST00000254066 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
RARA-201ENST00000254066 CLCN1P35523 988 aa26.39■■□□□ 1.82
RARA-201ENST00000254066 CD109Q6YHK3 1445 aa26.39■■□□□ 1.82
RARA-201ENST00000254066 PKD2Q13563 968 aa26.39■■□□□ 1.81
RARA-201ENST00000254066 FGD1P98174 961 aa26.38■■□□□ 1.81
RARA-201ENST00000254066 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
RARA-201ENST00000254066 PNNQ9H307 717 aaKnown RBP26.34■■□□□ 1.81
RARA-201ENST00000254066 USP19O94966 1318 aa26.33■■□□□ 1.81
RARA-201ENST00000254066 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.81
RARA-201ENST00000254066 HSP90AA2PQ14568 343 aaPredicted RBP26.33■■□□□ 1.8
RARA-201ENST00000254066 HSP90AA1P07900 732 aaKnown RBP26.31■■□□□ 1.8
RARA-201ENST00000254066 DUSP27Q5VZP5 1158 aa26.31■■□□□ 1.8
RARA-201ENST00000254066 KDM5DQ9BY66 1539 aa26.31■■□□□ 1.8
RARA-201ENST00000254066 FSD2A1L4K1 749 aa26.3■■□□□ 1.8
RARA-201ENST00000254066 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ABCA9Q8IUA7 1624 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ARID3CA6NKF2 412 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 CAMSAP2Q08AD1 1489 aa26.29■■□□□ 1.8
RARA-201ENST00000254066 ZNF644Q9H582 1327 aaPredicted RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms