RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 KIF3BO15066 747 aa30.12■■■□□ 2.41
SNRPA-201ENST00000243563 PRDM15P57071 1507 aaPredicted RBP30.08■■■□□ 2.41
SNRPA-201ENST00000243563 CEP152O94986 1710 aa30.06■■■□□ 2.4
SNRPA-201ENST00000243563 VWDEQ8N2E2 1590 aa30.04■■■□□ 2.4
SNRPA-201ENST00000243563 KDM5DQ9BY66 1539 aa30.03■■■□□ 2.4
SNRPA-201ENST00000243563 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
SNRPA-201ENST00000243563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.03■■■□□ 2.42e-9■■□□□ 11.7
SNRPA-201ENST00000243563 PZPP20742 1482 aa30.02■■■□□ 2.4
SNRPA-201ENST00000243563 ARID4BQ4LE39 1312 aaPredicted RBP30.01■■■□□ 2.39
SNRPA-201ENST00000243563 GGT6Q6P531 493 aa30.01■■■□□ 2.39
SNRPA-201ENST00000243563 MLECQ14165 292 aa30■■■□□ 2.39
SNRPA-201ENST00000243563 HRCP23327 699 aa30■■■□□ 2.39
SNRPA-201ENST00000243563 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
SNRPA-201ENST00000243563 NUP155O75694 1391 aa29.98■■■□□ 2.39
SNRPA-201ENST00000243563 FAM135AQ9P2D6 1515 aa29.98■■■□□ 2.39
SNRPA-201ENST00000243563 CLTCQ00610 1675 aaKnown RBP29.96■■■□□ 2.39
SNRPA-201ENST00000243563 ABCC3O15438 1527 aa29.95■■■□□ 2.39
SNRPA-201ENST00000243563 ZC3H13Q5T200 1668 aaKnown RBP29.93■■■□□ 2.38
SNRPA-201ENST00000243563 FER1L4A9Z1Z3 1794 aa29.92■■■□□ 2.38
SNRPA-201ENST00000243563 CAMSAP1Q5T5Y3 1602 aa29.91■■■□□ 2.38
SNRPA-201ENST00000243563 TET3O43151 1660 aa29.91■■■□□ 2.38
SNRPA-201ENST00000243563 ADAMTSL3P82987 1691 aa29.9■■■□□ 2.38
SNRPA-201ENST00000243563 E9PCH4 1651 aa29.89■■■□□ 2.38
SNRPA-201ENST00000243563 MADDQ8WXG6 1647 aa29.89■■■□□ 2.38
SNRPA-201ENST00000243563 DHX57Q6P158 1386 aaKnown RBP29.89■■■□□ 2.38
SNRPA-201ENST00000243563 LMTK2Q8IWU2 1503 aa29.89■■■□□ 2.37
SNRPA-201ENST00000243563 KANK1Q14678 1352 aa29.87■■■□□ 2.37
SNRPA-201ENST00000243563 EFCAB6Q5THR3 1501 aa29.85■■■□□ 2.37
SNRPA-201ENST00000243563 MPHOSPH9Q99550 1183 aa29.85■■■□□ 2.37
SNRPA-201ENST00000243563 WASHC2CQ9Y4E1 1318 aa29.84■■■□□ 2.37
SNRPA-201ENST00000243563 RIMS1Q86UR5 1692 aaKnown RBP29.83■■■□□ 2.37
SNRPA-201ENST00000243563 SLC4A1APQ9BWU0 796 aaKnown RBP29.82■■■□□ 2.36
SNRPA-201ENST00000243563 CFAP65Q6ZU64 1925 aaKnown RBP29.82■■■□□ 2.36
SNRPA-201ENST00000243563 FOXD1Q16676 465 aa29.81■■■□□ 2.36
SNRPA-201ENST00000243563 MROH2AA6NES4 1674 aa29.8■■■□□ 2.36
SNRPA-201ENST00000243563 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
SNRPA-201ENST00000243563 PKD2Q13563 968 aa29.78■■■□□ 2.36
SNRPA-201ENST00000243563 PPP6R1Q9UPN7 881 aa29.77■■■□□ 2.36
SNRPA-201ENST00000243563 C3P01024 1663 aa29.77■■■□□ 2.36
SNRPA-201ENST00000243563 NPATQ14207 1427 aa29.76■■■□□ 2.35
SNRPA-201ENST00000243563 SPHKAPQ2M3C7 1700 aa29.72■■■□□ 2.35
SNRPA-201ENST00000243563 PREX1Q8TCU6 1659 aa29.72■■■□□ 2.35
SNRPA-201ENST00000243563 CNTLNQ9NXG0 1405 aa29.71■■■□□ 2.35
SNRPA-201ENST00000243563 ARHGAP31Q2M1Z3 1444 aa29.7■■■□□ 2.35
SNRPA-201ENST00000243563 ZMYM3Q14202 1370 aa29.7■■■□□ 2.34
SNRPA-201ENST00000243563 PLA2R1Q13018 1463 aa29.69■■■□□ 2.34
SNRPA-201ENST00000243563 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
SNRPA-201ENST00000243563 RPRD2Q5VT52 1461 aaKnown RBP29.67■■■□□ 2.34
SNRPA-201ENST00000243563 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
SNRPA-201ENST00000243563 SYNMO15061 1565 aa29.65■■■□□ 2.34
SNRPA-201ENST00000243563 KDM4FA0A1W2PPD8 638 aa29.64■■■□□ 2.34
SNRPA-201ENST00000243563 FBXO31Q5XUX0 539 aaPredicted RBP29.64■■■□□ 2.34
SNRPA-201ENST00000243563 ANKRD30BQ9BXX2 1392 aa29.63■■■□□ 2.33
SNRPA-201ENST00000243563 ERVK-7P63135 1459 aa29.62■■■□□ 2.33
SNRPA-201ENST00000243563 UGGT1Q9NYU2 1555 aa29.62■■■□□ 2.33
SNRPA-201ENST00000243563 CCER1Q8TC90 406 aaPredicted RBP29.62■■■□□ 2.33
SNRPA-201ENST00000243563 PTPRTO14522 1441 aa29.62■■■□□ 2.33
SNRPA-201ENST00000243563 SPATA31D1Q6ZQQ2 1576 aa29.62■■■□□ 2.33
SNRPA-201ENST00000243563 TRPM2O94759 1503 aa29.6■■■□□ 2.33
SNRPA-201ENST00000243563 NOS1P29475 1434 aa29.6■■■□□ 2.33
SNRPA-201ENST00000243563 PLPPR3Q6T4P5 718 aa29.6■■■□□ 2.33
SNRPA-201ENST00000243563 CLTCL1P53675 1640 aa29.59■■■□□ 2.33
SNRPA-201ENST00000243563 PTPRMP28827 1452 aa29.59■■■□□ 2.33
SNRPA-201ENST00000243563 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
SNRPA-201ENST00000243563 SIN3AQ96ST3 1273 aa29.53■■■□□ 2.32
SNRPA-201ENST00000243563 MYO5BQ9ULV0 1848 aa29.47■■■□□ 2.31
SNRPA-201ENST00000243563 TNRQ92752 1358 aa29.46■■■□□ 2.31
SNRPA-201ENST00000243563 MYO3AQ8NEV4 1616 aa29.46■■■□□ 2.31
SNRPA-201ENST00000243563 CCDC144AA2RUR9 1427 aa29.45■■■□□ 2.3
SNRPA-201ENST00000243563 KIF1BO60333 1816 aa29.44■■■□□ 2.3
SNRPA-201ENST00000243563 CLSPNQ9HAW4 1339 aa29.42■■■□□ 2.3
SNRPA-201ENST00000243563 NEUROD1Q13562 356 aa29.41■■■□□ 2.3
SNRPA-201ENST00000243563 IDI1Q13907 227 aa29.4■■■□□ 2.3
SNRPA-201ENST00000243563 TMEM131LA2VDJ0 1609 aa29.39■■■□□ 2.3
SNRPA-201ENST00000243563 ADGRB3O60242 1522 aa29.37■■■□□ 2.29
SNRPA-201ENST00000243563 UBR1Q8IWV7 1749 aa29.37■■■□□ 2.29
SNRPA-201ENST00000243563 SETD1BQ9UPS6 1966 aaKnown RBP29.35■■■□□ 2.29
SNRPA-201ENST00000243563 SPATA31E1Q6ZUB1 1445 aa29.35■■■□□ 2.29
SNRPA-201ENST00000243563 ZNF142P52746 1687 aaPredicted RBP29.35■■■□□ 2.29
SNRPA-201ENST00000243563 SLC52A1Q9NWF4 448 aa29.33■■■□□ 2.29
SNRPA-201ENST00000243563 NLRP1Q9C000 1473 aa29.33■■■□□ 2.29
SNRPA-201ENST00000243563 CEP170BQ9Y4F5 1589 aaPredicted RBP29.32■■■□□ 2.28
SNRPA-201ENST00000243563 KDM5AP29375 1690 aaKnown RBP29.29■■■□□ 2.28
SNRPA-201ENST00000243563 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
SNRPA-201ENST00000243563 A2ML1A8K2U0 1454 aa29.29■■■□□ 2.28
SNRPA-201ENST00000243563 NEURL4Q96JN8 1562 aa29.28■■■□□ 2.28
SNRPA-201ENST00000243563 CHGAP10645 457 aaKnown RBP29.27■■■□□ 2.28
SNRPA-201ENST00000243563 RGL3Q3MIN7 710 aa29.25■■■□□ 2.27
SNRPA-201ENST00000243563 PPLO60437 1756 aa29.25■■■□□ 2.27
SNRPA-201ENST00000243563 UHRF1BP1Q6BDS2 1440 aa29.22■■■□□ 2.27
SNRPA-201ENST00000243563 NEXMIFQ5QGS0 1516 aa29.21■■■□□ 2.27
SNRPA-201ENST00000243563 L3MBTL2Q969R5 705 aa29.2■■■□□ 2.27
SNRPA-201ENST00000243563 TONSLQ96HA7 1378 aa29.19■■■□□ 2.26
SNRPA-201ENST00000243563 STAG3Q9UJ98 1225 aa29.16■■■□□ 2.26
SNRPA-201ENST00000243563 LMTK3Q96Q04 1460 aa29.16■■■□□ 2.26
SNRPA-201ENST00000243563 ZNF326Q5BKZ1 582 aaKnown RBP29.15■■■□□ 2.26
SNRPA-201ENST00000243563 ZFYVE9O95405 1425 aa29.14■■■□□ 2.26
SNRPA-201ENST00000243563 NUTM2DQ5VT03 806 aaPredicted RBP29.12■■■□□ 2.25
SNRPA-201ENST00000243563 ARHGAP23Q9P227 1491 aa29.12■■■□□ 2.25
SNRPA-201ENST00000243563 SLIT1O75093 1534 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms