RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
TGFB1-201ENST00000221930 ABCC1P33527 1531 aa20.89■□□□□ 0.93
TGFB1-201ENST00000221930 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
TGFB1-201ENST00000221930 BCORL1Q5H9F3 1711 aa20.87■□□□□ 0.93
TGFB1-201ENST00000221930 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
TGFB1-201ENST00000221930 WDR7Q9Y4E6 1490 aa20.87■□□□□ 0.93
TGFB1-201ENST00000221930 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
TGFB1-201ENST00000221930 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
TGFB1-201ENST00000221930 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
TGFB1-201ENST00000221930 CARD11Q9BXL7 1154 aa20.85■□□□□ 0.93
TGFB1-201ENST00000221930 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
TGFB1-201ENST00000221930 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
TGFB1-201ENST00000221930 MAGI2Q86UL8 1455 aa20.82■□□□□ 0.92
TGFB1-201ENST00000221930 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
TGFB1-201ENST00000221930 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
TGFB1-201ENST00000221930 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
TGFB1-201ENST00000221930 KDM5CP41229 1560 aa20.81■□□□□ 0.92
TGFB1-201ENST00000221930 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
TGFB1-201ENST00000221930 ANO8Q9HCE9 1232 aaPredicted RBP20.8■□□□□ 0.92
TGFB1-201ENST00000221930 ST20-MTHFSA0A0A6YYL1 179 aa20.79■□□□□ 0.92
TGFB1-201ENST00000221930 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
TGFB1-201ENST00000221930 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
TGFB1-201ENST00000221930 CFAP74Q9C0B2 1584 aa20.78■□□□□ 0.92
TGFB1-201ENST00000221930 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.92
TGFB1-201ENST00000221930 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
TGFB1-201ENST00000221930 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
TGFB1-201ENST00000221930 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
TGFB1-201ENST00000221930 FAM135AQ9P2D6 1515 aa20.75■□□□□ 0.91
TGFB1-201ENST00000221930 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
TGFB1-201ENST00000221930 ARID4BQ4LE39 1312 aaPredicted RBP20.74■□□□□ 0.91
TGFB1-201ENST00000221930 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
TGFB1-201ENST00000221930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
TGFB1-201ENST00000221930 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
TGFB1-201ENST00000221930 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
TGFB1-201ENST00000221930 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
TGFB1-201ENST00000221930 EIF2AK4Q9P2K8 1649 aaKnown RBP20.71■□□□□ 0.91
TGFB1-201ENST00000221930 ATP10AO60312 1499 aa20.7■□□□□ 0.9
TGFB1-201ENST00000221930 UBE2Q2Q8WVN8 375 aa20.7■□□□□ 0.9
TGFB1-201ENST00000221930 ZFYVE16Q7Z3T8 1539 aa20.7■□□□□ 0.9
TGFB1-201ENST00000221930 DEPDC5O75140 1603 aa20.7■□□□□ 0.9
TGFB1-201ENST00000221930 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
TGFB1-201ENST00000221930 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
TGFB1-201ENST00000221930 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
TGFB1-201ENST00000221930 MSH5O43196 834 aa20.67■□□□□ 0.9
TGFB1-201ENST00000221930 FANCAO15360 1455 aa20.65■□□□□ 0.9
TGFB1-201ENST00000221930 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
TGFB1-201ENST00000221930 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
TGFB1-201ENST00000221930 NUDCQ9Y266 331 aa20.64■□□□□ 0.9
TGFB1-201ENST00000221930 CCDC144AA2RUR9 1427 aa20.64■□□□□ 0.89
TGFB1-201ENST00000221930 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
TGFB1-201ENST00000221930 TRAPPC8Q9Y2L5 1435 aa20.62■□□□□ 0.89
TGFB1-201ENST00000221930 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
TGFB1-201ENST00000221930 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
TGFB1-201ENST00000221930 PLA2R1Q13018 1463 aa20.59■□□□□ 0.89
TGFB1-201ENST00000221930 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
TGFB1-201ENST00000221930 LAMC1P11047 1609 aa20.58■□□□□ 0.89
TGFB1-201ENST00000221930 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.89
TGFB1-201ENST00000221930 ADGRL1O94910 1474 aa20.57■□□□□ 0.88
TGFB1-201ENST00000221930 TET3O43151 1660 aa20.57■□□□□ 0.88
TGFB1-201ENST00000221930 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
TGFB1-201ENST00000221930 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
TGFB1-201ENST00000221930 RALBP1Q15311 655 aa20.56■□□□□ 0.88
TGFB1-201ENST00000221930 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
TGFB1-201ENST00000221930 NPM1P06748 294 aaKnown RBP eCLIP20.55■□□□□ 0.88
TGFB1-201ENST00000221930 ZNF518AQ6AHZ1 1483 aa20.54■□□□□ 0.88
TGFB1-201ENST00000221930 PRDM15P57071 1507 aaPredicted RBP20.54■□□□□ 0.88
TGFB1-201ENST00000221930 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
TGFB1-201ENST00000221930 A2MP01023 1474 aa20.53■□□□□ 0.88
TGFB1-201ENST00000221930 LRPPRCP42704 1394 aaKnown RBP20.53■□□□□ 0.88
TGFB1-201ENST00000221930 RNF123Q5XPI4 1314 aa20.52■□□□□ 0.88
TGFB1-201ENST00000221930 TRPM1Q7Z4N2 1603 aa20.52■□□□□ 0.88
TGFB1-201ENST00000221930 NEO1Q92859 1461 aa20.52■□□□□ 0.88
TGFB1-201ENST00000221930 GLI2P10070 1586 aa20.51■□□□□ 0.87
TGFB1-201ENST00000221930 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
TGFB1-201ENST00000221930 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
TGFB1-201ENST00000221930 KIDINS220Q9ULH0 1771 aa20.51■□□□□ 0.87
TGFB1-201ENST00000221930 TRPM2O94759 1503 aa20.5■□□□□ 0.87
TGFB1-201ENST00000221930 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
TGFB1-201ENST00000221930 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
TGFB1-201ENST00000221930 SPHKAPQ2M3C7 1700 aa20.49■□□□□ 0.87
TGFB1-201ENST00000221930 E9PCH4 1651 aa20.49■□□□□ 0.87
TGFB1-201ENST00000221930 KTN1Q86UP2 1357 aaKnown RBP20.49■□□□□ 0.87
TGFB1-201ENST00000221930 CEP152O94986 1710 aa20.49■□□□□ 0.87
TGFB1-201ENST00000221930 TESK2Q96S53 571 aa20.49■□□□□ 0.87
TGFB1-201ENST00000221930 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 DISP3Q9P2K9 1392 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 MLH3Q9UHC1 1453 aa20.48■□□□□ 0.87
TGFB1-201ENST00000221930 PTPRTO14522 1441 aa20.46■□□□□ 0.87
TGFB1-201ENST00000221930 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
TGFB1-201ENST00000221930 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
TGFB1-201ENST00000221930 GPRASP1Q5JY77 1395 aa20.46■□□□□ 0.87
TGFB1-201ENST00000221930 PARD3Q8TEW0 1356 aa20.46■□□□□ 0.87
TGFB1-201ENST00000221930 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
TGFB1-201ENST00000221930 CD109Q6YHK3 1445 aa20.45■□□□□ 0.86
TGFB1-201ENST00000221930 MROH1Q8NDA8 1641 aa20.45■□□□□ 0.86
TGFB1-201ENST00000221930 PANK3Q9H999 370 aa20.45■□□□□ 0.86
TGFB1-201ENST00000221930 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms