RNA–Protein interactions for RNA: ENST00000216832.8

PNN-201, Transcript of pinin, desmosome associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNN, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-201ENST00000216832 KIF13AQ9H1H9 1805 aa10.43□□□□□ -0.74
PNN-201ENST00000216832 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
PNN-201ENST00000216832 ZNF518AQ6AHZ1 1483 aa10.43□□□□□ -0.74
PNN-201ENST00000216832 TONSLQ96HA7 1378 aa10.42□□□□□ -0.74
PNN-201ENST00000216832 PKD2Q13563 968 aa10.42□□□□□ -0.74
PNN-201ENST00000216832 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
PNN-201ENST00000216832 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
PNN-201ENST00000216832 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
PNN-201ENST00000216832 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
PNN-201ENST00000216832 ADAMTS2O95450 1211 aa10.41□□□□□ -0.74
PNN-201ENST00000216832 ABCA8O94911 1581 aa10.4□□□□□ -0.75
PNN-201ENST00000216832 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
PNN-201ENST00000216832 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
PNN-201ENST00000216832 TNRQ92752 1358 aa10.39□□□□□ -0.75
PNN-201ENST00000216832 SETD5Q9C0A6 1442 aa10.39□□□□□ -0.75
PNN-201ENST00000216832 ILDR2Q71H61 639 aa10.37□□□□□ -0.75
PNN-201ENST00000216832 CASKIN1Q8WXD9 1431 aa10.37□□□□□ -0.75
PNN-201ENST00000216832 IDI1Q13907 227 aa10.37□□□□□ -0.75
PNN-201ENST00000216832 FOXD1Q16676 465 aa10.37□□□□□ -0.75
PNN-201ENST00000216832 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
PNN-201ENST00000216832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.36□□□□□ -0.75
PNN-201ENST00000216832 FAM9BQ8IZU0 186 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 NUP155O75694 1391 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 KIF15Q9NS87 1388 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
PNN-201ENST00000216832 EFCAB5A4FU69 1503 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 KCNA4P22459 653 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 POLR3GLQ9BT43 218 aa10.35□□□□□ -0.75
PNN-201ENST00000216832 NGLY1Q96IV0 654 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 ARAP3Q8WWN8 1544 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 KIF14Q15058 1648 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 ANKRD30AQ9BXX3 1397 aa10.34□□□□□ -0.75
PNN-201ENST00000216832 HECW1Q76N89 1606 aa10.33□□□□□ -0.76
PNN-201ENST00000216832 A2MP01023 1474 aa10.33□□□□□ -0.76
PNN-201ENST00000216832 GLI2P10070 1586 aa10.33□□□□□ -0.76
PNN-201ENST00000216832 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
PNN-201ENST00000216832 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
PNN-201ENST00000216832 POGKQ9P215 609 aa10.32□□□□□ -0.76
PNN-201ENST00000216832 NBR1Q14596 966 aa10.31□□□□□ -0.76
PNN-201ENST00000216832 DHX29Q7Z478 1369 aaKnown RBP10.31□□□□□ -0.76
PNN-201ENST00000216832 LTKP29376 864 aa10.31□□□□□ -0.76
PNN-201ENST00000216832 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
PNN-201ENST00000216832 RIMS1Q86UR5 1692 aaKnown RBP10.3□□□□□ -0.76
PNN-201ENST00000216832 SOX12O15370 315 aa10.3□□□□□ -0.76
PNN-201ENST00000216832 SYCP2Q9BX26 1530 aa10.3□□□□□ -0.76
PNN-201ENST00000216832 FAM135AQ9P2D6 1515 aa10.3□□□□□ -0.76
PNN-201ENST00000216832 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
PNN-201ENST00000216832 B4GALNT3Q6L9W6 998 aa10.29□□□□□ -0.76
PNN-201ENST00000216832 CNTLNQ9NXG0 1405 aa10.29□□□□□ -0.76
PNN-201ENST00000216832 NCOA2Q15596 1464 aa10.29□□□□□ -0.76
PNN-201ENST00000216832 TTC37Q6PGP7 1564 aa10.29□□□□□ -0.76
PNN-201ENST00000216832 SOCS7O14512 581 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 MSH5O43196 834 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 ESCO1Q5FWF5 840 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
PNN-201ENST00000216832 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 MAGI2Q86UL8 1455 aa10.28□□□□□ -0.76
PNN-201ENST00000216832 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
PNN-201ENST00000216832 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
PNN-201ENST00000216832 USP35Q9P2H5 1018 aa10.27□□□□□ -0.77
PNN-201ENST00000216832 CFAP43Q8NDM7 1665 aa10.27□□□□□ -0.77
PNN-201ENST00000216832 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
PNN-201ENST00000216832 AMOTL2Q9Y2J4 779 aa10.26□□□□□ -0.77
PNN-201ENST00000216832 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
PNN-201ENST00000216832 KCNA6P17658 529 aa10.25□□□□□ -0.77
PNN-201ENST00000216832 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
PNN-201ENST00000216832 MSH6P52701 1360 aa10.25□□□□□ -0.77
PNN-201ENST00000216832 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
PNN-201ENST00000216832 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.25□□□□□ -0.77
PNN-201ENST00000216832 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
PNN-201ENST00000216832 FANCIQ9NVI1 1328 aa10.24□□□□□ -0.77
PNN-201ENST00000216832 FOXO3O43524 673 aa10.24□□□□□ -0.77
PNN-201ENST00000216832 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
PNN-201ENST00000216832 FYCO1Q9BQS8 1478 aa10.24□□□□□ -0.77
PNN-201ENST00000216832 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
PNN-201ENST00000216832 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
PNN-201ENST00000216832 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
PNN-201ENST00000216832 MYOM3Q5VTT5 1437 aa10.23□□□□□ -0.77
PNN-201ENST00000216832 SENP3-EIF4A1A0A087X0R7 540 aa10.23□□□□□ -0.77
PNN-201ENST00000216832 DEKP35659 375 aaKnown RBP10.23□□□□□ -0.77
PNN-201ENST00000216832 ANP32AP39687 249 aaKnown RBP10.23□□□□□ -0.77
PNN-201ENST00000216832 TMEM132EQ6IEE7 984 aa10.23□□□□□ -0.77
PNN-201ENST00000216832 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
PNN-201ENST00000216832 CCDC141Q6ZP82 1450 aa10.22□□□□□ -0.77
PNN-201ENST00000216832 TMEM94Q12767 1356 aa10.22□□□□□ -0.77
PNN-201ENST00000216832 CCDC136Q96JN2 1154 aa10.22□□□□□ -0.77
PNN-201ENST00000216832 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.78
PNN-201ENST00000216832 SETD1BQ9UPS6 1966 aaKnown RBP10.21□□□□□ -0.78
PNN-201ENST00000216832 ARHGEF12Q9NZN5 1544 aa10.2□□□□□ -0.78
PNN-201ENST00000216832 PSME1Q06323 249 aa10.2□□□□□ -0.78
PNN-201ENST00000216832 NGDNQ8NEJ9 315 aaKnown RBP10.2□□□□□ -0.78
PNN-201ENST00000216832 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
PNN-201ENST00000216832 SRCAPQ6ZRS2 3230 aa10.2□□□□□ -0.78
PNN-201ENST00000216832 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
PNN-201ENST00000216832 NUTM2GQ5VZR2 741 aa10.19□□□□□ -0.78
PNN-201ENST00000216832 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms