RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
SRP54-201ENST00000216774 TMC1Q8TDI8 760 aa18■□□□□ 0.47
SRP54-201ENST00000216774 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
SRP54-201ENST00000216774 CDC42BPBQ9Y5S2 1711 aa17.99■□□□□ 0.47
SRP54-201ENST00000216774 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
SRP54-201ENST00000216774 RALBP1Q15311 655 aa17.99■□□□□ 0.47
SRP54-201ENST00000216774 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
SRP54-201ENST00000216774 MAST1Q9Y2H9 1570 aa17.98■□□□□ 0.47
SRP54-201ENST00000216774 MYBBP1AQ9BQG0 1328 aaKnown RBP17.97■□□□□ 0.47
SRP54-201ENST00000216774 UNC13BO14795 1591 aa17.97■□□□□ 0.47
SRP54-201ENST00000216774 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
SRP54-201ENST00000216774 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
SRP54-201ENST00000216774 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
SRP54-201ENST00000216774 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
SRP54-201ENST00000216774 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
SRP54-201ENST00000216774 LAMC1P11047 1609 aa17.94■□□□□ 0.46
SRP54-201ENST00000216774 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
SRP54-201ENST00000216774 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
SRP54-201ENST00000216774 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
SRP54-201ENST00000216774 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
SRP54-201ENST00000216774 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
SRP54-201ENST00000216774 IQGAP3Q86VI3 1631 aa17.9■□□□□ 0.46
SRP54-201ENST00000216774 PLEKHH2Q8IVE3 1493 aa17.9■□□□□ 0.46
SRP54-201ENST00000216774 PLA2R1Q13018 1463 aa17.89■□□□□ 0.45
SRP54-201ENST00000216774 ARHGAP5Q13017 1502 aa17.89■□□□□ 0.45
SRP54-201ENST00000216774 TTC37Q6PGP7 1564 aa17.88■□□□□ 0.45
SRP54-201ENST00000216774 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
SRP54-201ENST00000216774 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
SRP54-201ENST00000216774 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
SRP54-201ENST00000216774 A2MP01023 1474 aa17.87■□□□□ 0.45
SRP54-201ENST00000216774 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
SRP54-201ENST00000216774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.451e-7■■□□□ 13.5
SRP54-201ENST00000216774 WASHC2CQ9Y4E1 1318 aa17.87■□□□□ 0.45
SRP54-201ENST00000216774 ATP10AO60312 1499 aa17.87■□□□□ 0.45
SRP54-201ENST00000216774 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
SRP54-201ENST00000216774 COL17A1Q9UMD9 1497 aaPredicted RBP17.86■□□□□ 0.45
SRP54-201ENST00000216774 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
SRP54-201ENST00000216774 INSRP06213 1382 aa17.85■□□□□ 0.45
SRP54-201ENST00000216774 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
SRP54-201ENST00000216774 ZMYM4Q5VZL5 1548 aa17.84■□□□□ 0.45
SRP54-201ENST00000216774 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
SRP54-201ENST00000216774 PDE3BQ13370 1112 aa17.83■□□□□ 0.45
SRP54-201ENST00000216774 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.44
SRP54-201ENST00000216774 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
SRP54-201ENST00000216774 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
SRP54-201ENST00000216774 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
SRP54-201ENST00000216774 CHD1O14646 1710 aa17.81■□□□□ 0.44
SRP54-201ENST00000216774 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
SRP54-201ENST00000216774 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
SRP54-201ENST00000216774 TESK2Q96S53 571 aa17.8■□□□□ 0.44
SRP54-201ENST00000216774 RRP1P56182 461 aaKnown RBP17.79■□□□□ 0.44
SRP54-201ENST00000216774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.446e-10■■■□□ 14.9
SRP54-201ENST00000216774 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
SRP54-201ENST00000216774 DISP3Q9P2K9 1392 aa17.77■□□□□ 0.44
SRP54-201ENST00000216774 RCAN3Q9UKA8 241 aa17.77■□□□□ 0.43
SRP54-201ENST00000216774 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
SRP54-201ENST00000216774 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
SRP54-201ENST00000216774 TMF1P82094 1093 aa17.75■□□□□ 0.43
SRP54-201ENST00000216774 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
SRP54-201ENST00000216774 PLCH2O75038 1416 aa17.75■□□□□ 0.43
SRP54-201ENST00000216774 ABCC1P33527 1531 aa17.72■□□□□ 0.43
SRP54-201ENST00000216774 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
SRP54-201ENST00000216774 PANK3Q9H999 370 aa17.72■□□□□ 0.43
SRP54-201ENST00000216774 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 CC2D1BQ5T0F9 858 aaKnown RBP17.69■□□□□ 0.42
SRP54-201ENST00000216774 EXOC6Q8TAG9 804 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 UHRF1BP1LA0JNW5 1464 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 MADDQ8WXG6 1647 aa17.69■□□□□ 0.42
SRP54-201ENST00000216774 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
SRP54-201ENST00000216774 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
SRP54-201ENST00000216774 ZCCHC11Q5TAX3 1644 aaKnown RBP17.67■□□□□ 0.42
SRP54-201ENST00000216774 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
SRP54-201ENST00000216774 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
SRP54-201ENST00000216774 TRPM2O94759 1503 aa17.67■□□□□ 0.42
SRP54-201ENST00000216774 RTEL1-TNFRSF6BF6WH68 1400 aa17.66■□□□□ 0.42
SRP54-201ENST00000216774 WDR7Q9Y4E6 1490 aa17.66■□□□□ 0.42
SRP54-201ENST00000216774 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
SRP54-201ENST00000216774 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
SRP54-201ENST00000216774 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
SRP54-201ENST00000216774 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
SRP54-201ENST00000216774 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
SRP54-201ENST00000216774 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
SRP54-201ENST00000216774 PTPRTO14522 1441 aa17.63■□□□□ 0.41
SRP54-201ENST00000216774 SYNMO15061 1565 aa17.63■□□□□ 0.41
SRP54-201ENST00000216774 CEP152O94986 1710 aa17.63■□□□□ 0.41
SRP54-201ENST00000216774 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
SRP54-201ENST00000216774 MS4A1P11836 297 aa17.63■□□□□ 0.41
SRP54-201ENST00000216774 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
SRP54-201ENST00000216774 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
SRP54-201ENST00000216774 SCAF11Q99590 1463 aaKnown RBP17.61■□□□□ 0.41
SRP54-201ENST00000216774 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
SRP54-201ENST00000216774 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
SRP54-201ENST00000216774 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
SRP54-201ENST00000216774 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
SRP54-201ENST00000216774 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
SRP54-201ENST00000216774 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
SRP54-201ENST00000216774 TET3O43151 1660 aa17.58■□□□□ 0.41
SRP54-201ENST00000216774 CLTCL1P53675 1640 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms