RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
SRP54-201ENST00000216774 MT1EP04732 61 aa4.6□□□□□ -1.67
SRP54-201ENST00000216774 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
SRP54-201ENST00000216774 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
SRP54-201ENST00000216774 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
SRP54-201ENST00000216774 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
SRP54-201ENST00000216774 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
SRP54-201ENST00000216774 MT1GP13640 62 aa4.29□□□□□ -1.72
SRP54-201ENST00000216774 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
SRP54-201ENST00000216774 MT1MQ8N339 61 aa4.29□□□□□ -1.72
SRP54-201ENST00000216774 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SRP54-201ENST00000216774 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
SRP54-201ENST00000216774 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
SRP54-201ENST00000216774 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
SRP54-201ENST00000216774 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
SRP54-201ENST00000216774 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
SRP54-201ENST00000216774 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
SRP54-201ENST00000216774 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
SRP54-201ENST00000216774 NEBP20929 6669 aa4.1□□□□□ -1.75
SRP54-201ENST00000216774 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
SRP54-201ENST00000216774 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
SRP54-201ENST00000216774 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
SRP54-201ENST00000216774 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
SRP54-201ENST00000216774 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SRP54-201ENST00000216774 MT1AP04731 61 aa3.93□□□□□ -1.78
SRP54-201ENST00000216774 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
SRP54-201ENST00000216774 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SRP54-201ENST00000216774 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
SRP54-201ENST00000216774 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
SRP54-201ENST00000216774 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
SRP54-201ENST00000216774 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
SRP54-201ENST00000216774 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
SRP54-201ENST00000216774 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SRP54-201ENST00000216774 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
SRP54-201ENST00000216774 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SRP54-201ENST00000216774 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SRP54-201ENST00000216774 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SRP54-201ENST00000216774 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
SRP54-201ENST00000216774 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
SRP54-201ENST00000216774 SPRR2DP22532 72 aa3.6□□□□□ -1.83
SRP54-201ENST00000216774 PRM1P04553 51 aa3.57□□□□□ -1.84
SRP54-201ENST00000216774 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
SRP54-201ENST00000216774 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SRP54-201ENST00000216774 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
SRP54-201ENST00000216774 MT3P25713 68 aa3.49□□□□□ -1.85
SRP54-201ENST00000216774 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SRP54-201ENST00000216774 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
SRP54-201ENST00000216774 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
SRP54-201ENST00000216774 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SRP54-201ENST00000216774 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
SRP54-201ENST00000216774 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
SRP54-201ENST00000216774 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
SRP54-201ENST00000216774 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
SRP54-201ENST00000216774 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
SRP54-201ENST00000216774 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
SRP54-201ENST00000216774 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
SRP54-201ENST00000216774 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
SRP54-201ENST00000216774 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
SRP54-201ENST00000216774 MT4P47944 62 aa3.11□□□□□ -1.91
SRP54-201ENST00000216774 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
SRP54-201ENST00000216774 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
SRP54-201ENST00000216774 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
SRP54-201ENST00000216774 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
SRP54-201ENST00000216774 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SRP54-201ENST00000216774 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
SRP54-201ENST00000216774 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SRP54-201ENST00000216774 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
SRP54-201ENST00000216774 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
SRP54-201ENST00000216774 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
SRP54-201ENST00000216774 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SRP54-201ENST00000216774 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SRP54-201ENST00000216774 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
SRP54-201ENST00000216774 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SRP54-201ENST00000216774 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SRP54-201ENST00000216774 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SRP54-201ENST00000216774 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SRP54-201ENST00000216774 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 52.2 ms