RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
ACTN1-201ENST00000193403 DAPK1P53355 1430 aa14.5□□□□□ -0.09
ACTN1-201ENST00000193403 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
ACTN1-201ENST00000193403 TMF1P82094 1093 aa14.49□□□□□ -0.09
ACTN1-201ENST00000193403 ADAMTS8Q9UP79 889 aa14.49□□□□□ -0.09
ACTN1-201ENST00000193403 KDM6BO15054 1643 aa14.48□□□□□ -0.09
ACTN1-201ENST00000193403 BECN1Q14457 450 aa14.47□□□□□ -0.09
ACTN1-201ENST00000193403 PTPRGP23470 1445 aa14.47□□□□□ -0.09
ACTN1-201ENST00000193403 PRG4Q92954 1404 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-201ENST00000193403 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
ACTN1-201ENST00000193403 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.09
ACTN1-201ENST00000193403 CARMIL2Q6F5E8 1435 aa14.46□□□□□ -0.09
ACTN1-201ENST00000193403 CENPQQ7L2Z9 268 aaPredicted RBP14.46□□□□□ -0.09
ACTN1-201ENST00000193403 ABCC5O15440 1437 aa14.46□□□□□ -0.1
ACTN1-201ENST00000193403 NAP1L5Q96NT1 182 aaPredicted RBP14.46□□□□□ -0.1
ACTN1-201ENST00000193403 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-201ENST00000193403 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
ACTN1-201ENST00000193403 KDM5BQ9UGL1 1544 aa14.44□□□□□ -0.1
ACTN1-201ENST00000193403 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
ACTN1-201ENST00000193403 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
ACTN1-201ENST00000193403 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
ACTN1-201ENST00000193403 CLUAP1Q96AJ1 413 aa14.44□□□□□ -0.1
ACTN1-201ENST00000193403 UGGT2Q9NYU1 1516 aa14.43□□□□□ -0.1
ACTN1-201ENST00000193403 BCL2L13Q9BXK5 485 aa14.43□□□□□ -0.1
ACTN1-201ENST00000193403 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
ACTN1-201ENST00000193403 ANKRD50Q9ULJ7 1429 aa14.42□□□□□ -0.1
ACTN1-201ENST00000193403 APAF1O14727 1248 aa14.42□□□□□ -0.1
ACTN1-201ENST00000193403 COG6Q9Y2V7 657 aa14.42□□□□□ -0.1
ACTN1-201ENST00000193403 DENND4BO75064 1496 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-201ENST00000193403 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
ACTN1-201ENST00000193403 RRP7AQ9Y3A4 280 aaKnown RBP14.41□□□□□ -0.1
ACTN1-201ENST00000193403 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
ACTN1-201ENST00000193403 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
ACTN1-201ENST00000193403 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
ACTN1-201ENST00000193403 BCAR3O75815 825 aa14.4□□□□□ -0.1
ACTN1-201ENST00000193403 SPATA31E1Q6ZUB1 1445 aa14.4□□□□□ -0.1
ACTN1-201ENST00000193403 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
ACTN1-201ENST00000193403 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-201ENST00000193403 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
ACTN1-201ENST00000193403 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
ACTN1-201ENST00000193403 POGKQ9P215 609 aa14.38□□□□□ -0.11
ACTN1-201ENST00000193403 PANK1Q8TE04 598 aa14.37□□□□□ -0.11
ACTN1-201ENST00000193403 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
ACTN1-201ENST00000193403 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
ACTN1-201ENST00000193403 WDR62O43379 1518 aa14.36□□□□□ -0.11
ACTN1-201ENST00000193403 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
ACTN1-201ENST00000193403 ROCK1Q13464 1354 aa14.35□□□□□ -0.11
ACTN1-201ENST00000193403 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
ACTN1-201ENST00000193403 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
ACTN1-201ENST00000193403 CUL7Q14999 1698 aa14.34□□□□□ -0.11
ACTN1-201ENST00000193403 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
ACTN1-201ENST00000193403 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.12
ACTN1-201ENST00000193403 MLECQ14165 292 aa14.32□□□□□ -0.12
ACTN1-201ENST00000193403 PPP2R1AP30153 589 aa14.32□□□□□ -0.12
ACTN1-201ENST00000193403 FTSJ3Q8IY81 847 aaKnown RBP14.32□□□□□ -0.12
ACTN1-201ENST00000193403 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
ACTN1-201ENST00000193403 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-201ENST00000193403 KIAA0586Q9BVV6 1533 aa14.31□□□□□ -0.12
ACTN1-201ENST00000193403 WASHC2CQ9Y4E1 1318 aa14.31□□□□□ -0.12
ACTN1-201ENST00000193403 LRPPRCP42704 1394 aaKnown RBP14.31□□□□□ -0.12
ACTN1-201ENST00000193403 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
ACTN1-201ENST00000193403 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-201ENST00000193403 C8orf34Q49A92 452 aa14.3□□□□□ -0.12
ACTN1-201ENST00000193403 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
ACTN1-201ENST00000193403 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
ACTN1-201ENST00000193403 PNNQ9H307 717 aaKnown RBP14.29□□□□□ -0.12
ACTN1-201ENST00000193403 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
ACTN1-201ENST00000193403 PZPP20742 1482 aa14.29□□□□□ -0.12
ACTN1-201ENST00000193403 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
ACTN1-201ENST00000193403 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
ACTN1-201ENST00000193403 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
ACTN1-201ENST00000193403 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
ACTN1-201ENST00000193403 GLIPR1L2Q4G1C9 344 aa14.28□□□□□ -0.12
ACTN1-201ENST00000193403 TRIM44Q96DX7 344 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-201ENST00000193403 CAMSAP2Q08AD1 1489 aa14.28□□□□□ -0.12
ACTN1-201ENST00000193403 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
ACTN1-201ENST00000193403 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
ACTN1-201ENST00000193403 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-201ENST00000193403 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
ACTN1-201ENST00000193403 IGHDP01880 384 aa14.26□□□□□ -0.13
ACTN1-201ENST00000193403 C9orf84Q5VXU9 1444 aa14.26□□□□□ -0.13
ACTN1-201ENST00000193403 SEC24BO95487 1268 aa14.25□□□□□ -0.13
ACTN1-201ENST00000193403 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
ACTN1-201ENST00000193403 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
ACTN1-201ENST00000193403 PER1O15534 1290 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-201ENST00000193403 GGT6Q6P531 493 aa14.24□□□□□ -0.13
ACTN1-201ENST00000193403 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-201ENST00000193403 PARD3Q8TEW0 1356 aa14.24□□□□□ -0.13
ACTN1-201ENST00000193403 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
ACTN1-201ENST00000193403 GCC2Q8IWJ2 1684 aa14.24□□□□□ -0.13
ACTN1-201ENST00000193403 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
ACTN1-201ENST00000193403 E9PSI1 815 aa14.23□□□□□ -0.13
ACTN1-201ENST00000193403 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-201ENST00000193403 BCORL1Q5H9F3 1711 aa14.23□□□□□ -0.13
ACTN1-201ENST00000193403 ADAMTS12P58397 1594 aa14.23□□□□□ -0.13
ACTN1-201ENST00000193403 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
ACTN1-201ENST00000193403 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
ACTN1-201ENST00000193403 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 SLFN5Q08AF3 891 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms