RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 CCDC144AA2RUR9 1427 aa36.24■■■■□ 3.39
RTN4R-201ENST00000043402 AFAP1Q8N556 730 aa36.24■■■■□ 3.39
RTN4R-201ENST00000043402 ABCA9Q8IUA7 1624 aa36.22■■■■□ 3.39
RTN4R-201ENST00000043402 SPAG9O60271 1321 aaKnown RBP36.2■■■■□ 3.39
RTN4R-201ENST00000043402 RTEL1-TNFRSF6BF6WH68 1400 aa36.19■■■■□ 3.38
RTN4R-201ENST00000043402 ZFYVE16Q7Z3T8 1539 aa36.18■■■■□ 3.38
RTN4R-201ENST00000043402 OSCARQ8IYS5 282 aa36.18■■■■□ 3.38
RTN4R-201ENST00000043402 FANCAO15360 1455 aa36.17■■■■□ 3.38
RTN4R-201ENST00000043402 ASXL2Q76L83 1435 aa36.17■■■■□ 3.38
RTN4R-201ENST00000043402 CARD11Q9BXL7 1154 aa36.17■■■■□ 3.38
RTN4R-201ENST00000043402 PRKRIP1Q9H875 184 aaPredicted RBP36.16■■■■□ 3.38
RTN4R-201ENST00000043402 SUPT16HQ9Y5B9 1047 aaKnown RBP36.15■■■■□ 3.38
RTN4R-201ENST00000043402 ATP10AO60312 1499 aa36.11■■■■□ 3.37
RTN4R-201ENST00000043402 RGL3Q3MIN7 710 aa36.09■■■■□ 3.37
RTN4R-201ENST00000043402 CCDC184Q52MB2 194 aa36.09■■■■□ 3.37
RTN4R-201ENST00000043402 PRAG1Q86YV5 1406 aa36.09■■■■□ 3.37
RTN4R-201ENST00000043402 A2MP01023 1474 aa36.07■■■■□ 3.37
RTN4R-201ENST00000043402 INO80Q9ULG1 1556 aaPredicted RBP36.05■■■■□ 3.36
RTN4R-201ENST00000043402 ARID4BQ4LE39 1312 aaPredicted RBP36.05■■■■□ 3.36
RTN4R-201ENST00000043402 TRPM1Q7Z4N2 1603 aa36.05■■■■□ 3.36
RTN4R-201ENST00000043402 ADGRL1O94910 1474 aa36.04■■■■□ 3.36
RTN4R-201ENST00000043402 ROCK2O75116 1388 aaKnown RBP36.03■■■■□ 3.36
RTN4R-201ENST00000043402 ATP7AQ04656 1500 aa36.03■■■■□ 3.36
RTN4R-201ENST00000043402 SCAPERQ9BY12 1400 aa36.02■■■■□ 3.36
RTN4R-201ENST00000043402 ST20-MTHFSA0A0A6YYL1 179 aa36.02■■■■□ 3.36
RTN4R-201ENST00000043402 DHX29Q7Z478 1369 aaKnown RBP36.01■■■■□ 3.36
RTN4R-201ENST00000043402 POLR3GLQ9BT43 218 aa36■■■■□ 3.35
RTN4R-201ENST00000043402 E9PCH4 1651 aa35.99■■■■□ 3.35
RTN4R-201ENST00000043402 DEPDC5O75140 1603 aa35.99■■■■□ 3.35
RTN4R-201ENST00000043402 HNRNPUQ00839 825 aaKnown RBP eCLIP35.95■■■■□ 3.34
RTN4R-201ENST00000043402 NBPF1Q3BBV0 1214 aa35.94■■■■□ 3.34
RTN4R-201ENST00000043402 NPM1P06748 294 aaKnown RBP eCLIP35.93■■■■□ 3.34
RTN4R-201ENST00000043402 GPRASP1Q5JY77 1395 aa35.9■■■■□ 3.34
RTN4R-201ENST00000043402 MRS2Q9HD23 443 aa35.89■■■■□ 3.34
RTN4R-201ENST00000043402 VWDEQ8N2E2 1590 aa35.87■■■■□ 3.33
RTN4R-201ENST00000043402 MYT1LQ9UL68 1186 aa35.86■■■■□ 3.33
RTN4R-201ENST00000043402 TRPM2O94759 1503 aa35.85■■■■□ 3.33
RTN4R-201ENST00000043402 TET3O43151 1660 aa35.84■■■■□ 3.33
RTN4R-201ENST00000043402 PTPRTO14522 1441 aa35.84■■■■□ 3.33
RTN4R-201ENST00000043402 KIF3BO15066 747 aa35.84■■■■□ 3.33
RTN4R-201ENST00000043402 LAMC1P11047 1609 aa35.83■■■■□ 3.33
RTN4R-201ENST00000043402 KIDINS220Q9ULH0 1771 aa35.83■■■■□ 3.33
RTN4R-201ENST00000043402 SPHKAPQ2M3C7 1700 aa35.83■■■■□ 3.33
RTN4R-201ENST00000043402 EIF2AK4Q9P2K8 1649 aaKnown RBP35.82■■■■□ 3.32
RTN4R-201ENST00000043402 FAM9BQ8IZU0 186 aa35.81■■■■□ 3.32
RTN4R-201ENST00000043402 PRDM15P57071 1507 aaPredicted RBP35.81■■■■□ 3.32
RTN4R-201ENST00000043402 MROH1Q8NDA8 1641 aa35.8■■■■□ 3.32
RTN4R-201ENST00000043402 CD109Q6YHK3 1445 aa35.79■■■■□ 3.32
RTN4R-201ENST00000043402 KANK1Q14678 1352 aa35.78■■■■□ 3.32
RTN4R-201ENST00000043402 ZNF518AQ6AHZ1 1483 aa35.77■■■■□ 3.32
RTN4R-201ENST00000043402 FKBP8Q14318 412 aa35.77■■■■□ 3.32
RTN4R-201ENST00000043402 CLTCL1P53675 1640 aa35.77■■■■□ 3.32
RTN4R-201ENST00000043402 CNGB1Q14028 1251 aaPredicted RBP35.76■■■■□ 3.32
RTN4R-201ENST00000043402 CEP152O94986 1710 aa35.76■■■■□ 3.32
RTN4R-201ENST00000043402 RNF17Q9BXT8 1623 aaKnown RBP35.71■■■■□ 3.31
RTN4R-201ENST00000043402 TESK2Q96S53 571 aa35.7■■■■□ 3.31
RTN4R-201ENST00000043402 MADDQ8WXG6 1647 aa35.69■■■■□ 3.3
RTN4R-201ENST00000043402 CFAP74Q9C0B2 1584 aa35.69■■■■□ 3.3
RTN4R-201ENST00000043402 POGZQ7Z3K3 1410 aa35.68■■■■□ 3.3
RTN4R-201ENST00000043402 COL17A1Q9UMD9 1497 aaPredicted RBP35.65■■■■□ 3.3
RTN4R-201ENST00000043402 DISP3Q9P2K9 1392 aa35.63■■■■□ 3.29
RTN4R-201ENST00000043402 BCANQ96GW7 911 aa35.62■■■■□ 3.29
RTN4R-201ENST00000043402 NEFLP07196 543 aa35.62■■■■□ 3.29
RTN4R-201ENST00000043402 EFCAB6Q5THR3 1501 aa35.61■■■■□ 3.29
RTN4R-201ENST00000043402 MLH3Q9UHC1 1453 aa35.6■■■■□ 3.29
RTN4R-201ENST00000043402 ZBED9Q6R2W3 1325 aa35.59■■■■□ 3.29
RTN4R-201ENST00000043402 PPRC1Q5VV67 1664 aaKnown RBP35.58■■■■□ 3.29
RTN4R-201ENST00000043402 UGGT1Q9NYU2 1555 aa35.58■■■■□ 3.29
RTN4R-201ENST00000043402 FRMPD1Q5SYB0 1578 aa35.57■■■■□ 3.29
RTN4R-201ENST00000043402 STAC3Q96MF2 364 aa35.57■■■■□ 3.28
RTN4R-201ENST00000043402 LMTK2Q8IWU2 1503 aa35.56■■■■□ 3.28
RTN4R-201ENST00000043402 HECW2Q9P2P5 1572 aa35.55■■■■□ 3.28
RTN4R-201ENST00000043402 NEURL4Q96JN8 1562 aa35.55■■■■□ 3.28
RTN4R-201ENST00000043402 IQGAP1P46940 1657 aa35.53■■■■□ 3.28
RTN4R-201ENST00000043402 PER1O15534 1290 aaPredicted RBP35.52■■■■□ 3.28
RTN4R-201ENST00000043402 KTN1Q86UP2 1357 aaKnown RBP35.52■■■■□ 3.28
RTN4R-201ENST00000043402 NEO1Q92859 1461 aa35.5■■■■□ 3.27
RTN4R-201ENST00000043402 RALBP1Q15311 655 aa35.5■■■■□ 3.27
RTN4R-201ENST00000043402 TMF1P82094 1093 aa35.49■■■■□ 3.27
RTN4R-201ENST00000043402 PNISRQ8TF01 805 aaKnown RBP35.49■■■■□ 3.27
RTN4R-201ENST00000043402 ABCA6Q8N139 1617 aa35.49■■■■□ 3.27
RTN4R-201ENST00000043402 MYBBP1AQ9BQG0 1328 aaKnown RBP35.48■■■■□ 3.27
RTN4R-201ENST00000043402 TMC1Q8TDI8 760 aa35.47■■■■□ 3.27
RTN4R-201ENST00000043402 RAPGEF3O95398 923 aa35.47■■■■□ 3.27
RTN4R-201ENST00000043402 KIF1BO60333 1816 aa35.46■■■■□ 3.27
RTN4R-201ENST00000043402 SCAF11Q99590 1463 aaKnown RBP35.44■■■■□ 3.26
RTN4R-201ENST00000043402 BRD4O60885 1362 aaPredicted RBP35.42■■■■□ 3.26
RTN4R-201ENST00000043402 PARD3Q8TEW0 1356 aa35.42■■■■□ 3.26
RTN4R-201ENST00000043402 GGT6Q6P531 493 aa35.42■■■■□ 3.26
RTN4R-201ENST00000043402 MROH2AA6NES4 1674 aa35.41■■■■□ 3.26
RTN4R-201ENST00000043402 KIAA1210Q9ULL0 1709 aa35.41■■■■□ 3.26
RTN4R-201ENST00000043402 MAP3K4Q9Y6R4 1608 aa35.4■■■■□ 3.26
RTN4R-201ENST00000043402 NPATQ14207 1427 aa35.4■■■■□ 3.26
RTN4R-201ENST00000043402 PANK3Q9H999 370 aa35.4■■■■□ 3.26
RTN4R-201ENST00000043402 MYOM2P54296 1465 aa35.39■■■■□ 3.26
RTN4R-201ENST00000043402 CYB5RLQ6IPT4 315 aa35.39■■■■□ 3.26
RTN4R-201ENST00000043402 IFT172Q9UG01 1749 aa35.38■■■■□ 3.25
RTN4R-201ENST00000043402 ADGRF5Q8IZF2 1346 aa35.37■■■■□ 3.25
RTN4R-201ENST00000043402 CFAP65Q6ZU64 1925 aaKnown RBP35.36■■■■□ 3.25
RTN4R-201ENST00000043402 LRPPRCP42704 1394 aaKnown RBP35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms