RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Irx6Q9ER75 438 aa17.13■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Tmco5bQ80X59 307 aa17.13■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Cnga1P29974 684 aa17.12■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Ksr2Q3UVC0 959 aa17.12■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Rock1P70335 1354 aa17.12■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Cgnl1Q6AW69 1298 aa17.12■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Slc4a2P13808 1237 aaKnown RBP17.11■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 1700019A02RikA0A087WPV9 146 aa17.11■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Ankrd36D3Z4K0 1415 aa17.11■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Samd1D3YXK1 519 aa17.11■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Tnpo1Q8BFY9 898 aaKnown RBP17.1■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Cwc15Q9JHS9 229 aaKnown RBP17.1■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Ccdc34Q3UI66 367 aa17.09■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Kdm5dQ62240 1548 aa17.09■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 PnisrA2AJT4 805 aaKnown RBP17.09■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 KarsQ99MN1 595 aaKnown RBP17.08■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Sh3bp5Q9Z131 463 aa17.08■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 Tpm3P21107 285 aaKnown RBP17.08■□□□□ 0.33
Pcdha11-201ENSMUST00000115658 CalrP14211 416 aaKnown RBP17.08■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Iffo2Q8R2V2 512 aa17.08■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Rpap1Q80TE0 1409 aa17.08■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Rapgef2Q8CHG7 1496 aa17.08■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Dixdc1Q80Y83 711 aa17.07■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 U2af1Q9D883 239 aaKnown RBP17.07■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Filip1lQ6P6L0 1131 aa17.07■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Stag3O70576 1240 aa17.06■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Vgll3P85442 326 aa17.06■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Kcnh8P59111 1102 aa17.06■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Usp47Q8BY87 1376 aa17.06■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Kif15Q6P9L6 1387 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Rrp7aQ9D1C9 280 aaKnown RBP17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Ccdc146E9Q9F7 977 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Trim58Q5NCC9 485 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Ssh1Q76I79 1042 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Dcaf11Q91VU6 549 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Cdkn1cP49919 348 aa17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Rnf214Q8BFU3 668 aaKnown RBP17.05■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Atl3Q91YH5 541 aa17.04■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Dusp9Q7TNL7 452 aa17.04■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 CrebrfQ8CDG5 640 aaKnown RBP17.04■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Ifit1bl1D3Z6F0 470 aa17.04■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Hmgn5Q9JL35 406 aa17.04■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Ppp2r3aB2RXC8 1150 aa17.03■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Pde3bQ61409 1100 aa17.03■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Map4P27546 1125 aaKnown RBP17.02■□□□□ 0.32
Pcdha11-201ENSMUST00000115658 Sptbn5F6UCX4 1208 aa17.02■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Trak1Q6PD31 939 aa17.02■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 U2surpQ6NV83 1029 aaKnown RBP17.01■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Eif4g2Q62448 906 aaKnown RBP17.01■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Nap1l3Q794H2 544 aa17.01■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Plekhh1Q80TI1 1356 aa17.01■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Kif27Q7M6Z4 1394 aa17■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Rassf8Q8CJ96 419 aa17■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Pank3Q8R2W9 370 aa17■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 UacaQ8CGB3 1411 aa17■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Tpm3-rs7D3Z2H9 248 aa16.99■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Anapc15P60007 132 aa16.99■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Esx1O88933 382 aa16.98■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Cabp1Q9JLK7 227 aa16.98■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Gtf2e1Q9D0D5 440 aa16.98■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Sh3bgrQ9WUZ7 214 aa16.98■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Liat1Q810M6 228 aa16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Cbx1P83917 185 aaKnown RBP16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Gse1Q3U3C9 1213 aa16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Rpgrip1lQ8CG73 1264 aa16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Ercc6F8VPZ5 1481 aa16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Drc7Q6V3W6 876 aa16.97■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Ncapd3Q6ZQK0 1506 aa16.96■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Slc4a1apE9PX68 744 aa16.96■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 KinQ8K339 391 aa16.96■□□□□ 0.31
Pcdha11-201ENSMUST00000115658 Aebp1Q640N1 1128 aa16.95■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Polr3gQ6NXY9 223 aa16.95■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 NcapgE9PWG6 1004 aa16.95■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Zfp444Q3TDV8 331 aaKnown RBP16.95■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Stk24Q99KH8 431 aa16.94■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Q8BT18 775 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Crybg2B7ZCC2 1516 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Pank1Q8K4K6 548 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Ccer1Q9CQL2 403 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Zrsr2Q62377 462 aaKnown RBP16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Dapk1Q80YE7 1442 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 MecomP14404 1042 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Znhit6Q3UFB2 460 aaKnown RBP16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Inpp5dQ9ES52 1191 aa16.93■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 PogkQ80TC5 607 aa16.92■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Mns1Q61884 491 aa16.92■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Ftsj3Q9DBE9 838 aaKnown RBP16.92■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Ccdc30Q8BVF4 654 aa16.92■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Arhgap27A2AB59 869 aa16.92■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Mcm4P49717 862 aa16.91■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Trim55G3X8Y1 545 aa16.91■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Zfp777B9EKF4 885 aa16.91■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Olfml1Q8BSH2 233 aa16.91■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Pdcl2Q78Y63 240 aa16.9■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 1700010I14RikQ7TPG0 532 aa16.9■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Def6Q8C2K1 630 aa16.9■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Ccdc60Q8C4J0 545 aa16.9■□□□□ 0.3
Pcdha11-201ENSMUST00000115658 Tex2Q6ZPJ0 1128 aaKnown RBP16.89■□□□□ 0.29
Pcdha11-201ENSMUST00000115658 Srcin1Q9QWI6 1250 aa16.89■□□□□ 0.29
Pcdha11-201ENSMUST00000115658 Smarca2Q6DIC0 1577 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms