RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Rbm10Q99KG3 930 aaKnown RBP9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Gpatch8A2A6A1 1505 aa9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Gm6268A2A3U9 297 aa9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Rwdd1Q9CQK7 243 aa9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Grin2aP35436 1464 aa9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Dhx57Q6P5D3 1388 aaKnown RBP9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Ak7Q9D2H2 614 aa9.59□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Fam43aQ8BUP8 424 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Magi3Q9EQJ9 1476 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Setbp1Q9Z180 1582 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 A2mQ6GQT1 1474 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 PogkQ80TC5 607 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Tmc1Q8R4P5 757 aa9.58□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Ppp1r9bQ6R891 817 aaKnown RBP9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Isy1Q69ZQ2 285 aaKnown RBP9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Erbb3Q61526 1339 aa9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Pkd2O35245 966 aa9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 VgfQ0VGU4 617 aa9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Stard8Q8K031 1019 aa9.57□□□□□ -0.88
Bdnf-204ENSMUST00000111044 WrnO09053 1401 aa9.56□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Cabp1Q9JLK7 227 aa9.56□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Zmym3Q9JLM4 1370 aa9.56□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Nom1Q3UFM5 854 aaKnown RBP9.56□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Plcb2A3KGF7 1181 aa9.55□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Card11Q8CIS0 1159 aa9.55□□□□□ -0.88
Bdnf-204ENSMUST00000111044 IbspQ61711 324 aa9.55□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Ccdc183A2AJB1 534 aa9.55□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Trim26Q99PN3 545 aa9.54□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Clcn1Q64347 994 aa9.54□□□□□ -0.88
Bdnf-204ENSMUST00000111044 PxdnQ3UQ28 1475 aa9.53□□□□□ -0.88
Bdnf-204ENSMUST00000111044 WizO88286 1684 aaKnown RBP9.53□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Fkbp15Q6P9Q6 1216 aaKnown RBP9.53□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Zfp91Q62511 572 aa9.53□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Mtus2Q3UHD3 1353 aa9.53□□□□□ -0.88
Bdnf-204ENSMUST00000111044 Arhgef12Q8R4H2 1543 aaKnown RBP9.52□□□□□ -0.88
Bdnf-204ENSMUST00000111044 SlkO54988 1233 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Vgll3P85442 326 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rundc1Q0VDN7 615 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Chrna2Q91X60 512 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Smc5Q8CG46 1101 aaKnown RBP9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Abca5Q8K448 1642 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Kdm2bQ6P1G2 1309 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Mcm4P49717 862 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Fbxo2Q80UW2 297 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 NexmifQ5DTT1 1515 aa9.52□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Soga1E1U8D0 1418 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Dapk1Q80YE7 1442 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rpgrip1lQ8CG73 1264 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Scaf1Q5U4C3 1256 aaKnown RBP9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rprd2Q6NXI6 1469 aaKnown RBP9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 BC005561E9Q5E2 1589 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Sptbn5F6UCX4 1208 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rgl3Q3UYI5 709 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Ush1cQ9ES64 910 aa9.51□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Zfp644E9QA22 1323 aa9.5□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Lmtk2Q3TYD6 1471 aa9.5□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rabep1O35551 862 aa9.5□□□□□ -0.89
Bdnf-204ENSMUST00000111044 DekQ7TNV0 380 aaKnown RBP9.5□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Pdia4P08003 638 aaKnown RBP9.49□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Apbb1Q9QXJ1 710 aa9.49□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Plekhh1Q80TI1 1356 aa9.49□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Myom3A2ABU4 1439 aa9.49□□□□□ -0.89
Bdnf-204ENSMUST00000111044 TimelessQ9R1X4 1197 aa9.48□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Ncoa3O09000 1398 aa9.48□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Ift140E9PY46 1464 aa9.48□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Erich6bQ9D4S6 220 aa9.48□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Mug1P28665 1476 aa9.47□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Becn1O88597 448 aa9.47□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Adamts12Q811B3 1600 aa9.47□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Ssh1Q76I79 1042 aa9.47□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Gse1Q3U3C9 1213 aa9.47□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Kif21bQ9QXL1 1668 aa9.46□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Rock1P70335 1354 aa9.46□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Lekr1B2RVN1 116 aa9.46□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Tnpo1Q8BFY9 898 aaKnown RBP9.46□□□□□ -0.89
Bdnf-204ENSMUST00000111044 Il4rP16382 810 aa9.46□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Abcc5Q9R1X5 1436 aa9.46□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Ylpm1Q9R0I7 1386 aaKnown RBP9.45□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Plekhh2Q8C115 1491 aa9.45□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Kif16bB1AVY7 1312 aa9.45□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Nup160Q9Z0W3 1402 aaKnown RBP9.45□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Dcaf11Q91VU6 549 aa9.44□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Zmym4A2A791 1549 aaKnown RBP9.44□□□□□ -0.9
Bdnf-204ENSMUST00000111044 PtmaP26350 111 aa9.44□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Pdcl2Q78Y63 240 aa9.44□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Arhgap31A6X8Z5 1425 aa9.44□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Ttc41Q692V3 1318 aa9.43□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Pik3c2gO70167 1506 aa9.43□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Arid4bA2CG63 1314 aaKnown RBP9.43□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Plppr3Q7TPB0 716 aa9.43□□□□□ -0.9
Bdnf-204ENSMUST00000111044 CrbnQ8C7D2 445 aa9.43□□□□□ -0.9
Bdnf-204ENSMUST00000111044 MsnP26041 577 aaKnown RBP9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Rfx7F8VPJ6 1459 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Cc2d2bA0A286YDU8 1405 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Lmod3E9QA62 571 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Rsph3aQ3UFY4 516 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Q7TT23 1179 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Arhgef40Q3UPH7 1517 aa9.42□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Irf5P56477 497 aa9.41□□□□□ -0.9
Bdnf-204ENSMUST00000111044 Naip6Q9JIB6 1403 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms