RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 Usp40Q8BWR4 1235 aa17.41■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Dhx9O70133 1380 aaKnown RBP17.4■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Ksr2Q3UVC0 959 aa17.39■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Cluap1Q8R3P7 413 aa17.39■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Ppp1r18Q8BQ30 594 aa17.39■□□□□ 0.37
Col6a2-202ENSMUST00000105413 ChgaP26339 463 aaKnown RBP17.38■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Tmco5bQ80X59 307 aa17.38■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Kif7B7ZNG0 1348 aa17.38■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Pde4cQ3UEI1 686 aa17.38■□□□□ 0.37
Col6a2-202ENSMUST00000105413 KnstrnQ9D9Z1 312 aaKnown RBP17.37■□□□□ 0.37
Col6a2-202ENSMUST00000105413 A2mQ6GQT1 1474 aa17.37■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Spryd3E9Q9B3 442 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Birc3O08863 600 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Ipo8Q7TMY7 1010 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Plin1Q8CGN5 517 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 TchhA0A0B4J1F9 1599 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Fam163aQ8CAA5 168 aa17.36■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Mrc2Q64449 1479 aa17.35■□□□□ 0.37
Col6a2-202ENSMUST00000105413 SynmQ70IV5 1561 aa17.35■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Il16O54824 1322 aa17.35■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Znf330Q922H9 316 aa17.35■□□□□ 0.37
Col6a2-202ENSMUST00000105413 U2surpQ6NV83 1029 aaKnown RBP17.35■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Plb1Q3TTY0 1478 aa17.34■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Q7TT23 1179 aa17.34■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Plekhg5Q66T02 1073 aa17.33■□□□□ 0.37
Col6a2-202ENSMUST00000105413 Ankrd26Q811D2 1581 aa17.33■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Myom3A2ABU4 1439 aa17.33■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Tsen2Q6P7W5 460 aa17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Prdm16A2A935 1275 aa17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 CenpjQ569L8 1344 aa17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Nsd2Q8BVE8 1365 aa17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Ccar1Q8CH18 1146 aaKnown RBP17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Zfp777B9EKF4 885 aa17.32■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Cd109Q8R422 1442 aa17.31■□□□□ 0.36
Col6a2-202ENSMUST00000105413 NexmifQ5DTT1 1515 aa17.3■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Slx4Q6P1D7 1565 aa17.3■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Znf316Q6PGE4 1016 aa17.3■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Ythdc1E9Q5K9 736 aaKnown RBP17.3■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Utp14aQ640M1 767 aaKnown RBP17.29■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Mug1P28665 1476 aa17.29■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Abcc5Q9R1X5 1436 aa17.29■□□□□ 0.36
Col6a2-202ENSMUST00000105413 GsdmaQ9EST1 446 aa17.29■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Map3k5O35099 1380 aa17.28■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Ralbp1Q62172 648 aa17.28■□□□□ 0.36
Col6a2-202ENSMUST00000105413 ErbinQ80TH2 1402 aa17.28■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Washc2Q6PGL7 1334 aa17.28■□□□□ 0.36
Col6a2-202ENSMUST00000105413 HnrnpuQ8VEK3 800 aaKnown RBP17.27■□□□□ 0.36
Col6a2-202ENSMUST00000105413 3425401B19RikD3Z1D3 1412 aa17.27■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Senp3Q9EP97 568 aaKnown RBP17.27■□□□□ 0.36
Col6a2-202ENSMUST00000105413 Zfp444Q3TDV8 331 aaKnown RBP17.26■□□□□ 0.35
Col6a2-202ENSMUST00000105413 PtmaP26350 111 aa17.26■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Mfap1aC0HKD8 439 aaKnown RBP17.25■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Mfap1bC0HKD9 439 aaKnown RBP17.25■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Psme1P97371 249 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Txndc2Q6P902 515 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Prkrip1Q9CWV6 186 aaKnown RBP17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Naip5Q9R016 1403 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Ccdc30Q8BVF4 654 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Crocc2F6XLV1 1638 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Arhgap5P97393 1501 aa17.24■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Lmod3E9QA62 571 aa17.23■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Rtf1A2AQ19 715 aaKnown RBP17.23■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Ccdc141E9Q8Q6 1531 aa17.22■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Pak3Q61036 559 aa17.21■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Hsp90b1P08113 802 aaKnown RBP17.21■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Shq1Q7TMX5 569 aa17.21■□□□□ 0.35
Col6a2-202ENSMUST00000105413 Ppp2r1aQ76MZ3 589 aa17.2■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Fgd6Q69ZL1 1399 aa17.2■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Grin2aP35436 1464 aa17.2■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Puf60Q3UEB3 564 aaKnown RBP17.19■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Kif16bB1AVY7 1312 aa17.19■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Mink1Q9JM52 1308 aa17.19■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Ccdc60Q8C4J0 545 aa17.18■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Gm1043A0A140LJC2 1431 aa17.18■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Rfx7F8VPJ6 1459 aa17.17■□□□□ 0.34
Col6a2-202ENSMUST00000105413 TnnQ80Z71 1560 aa17.17■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Trim58Q5NCC9 485 aa17.17■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Rsph4aQ8BYM7 716 aa17.16■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Ttll13A4Q9F6 804 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Kcnh8P59111 1102 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Ncoa1P70365 1447 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Gpatch8A2A6A1 1505 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 GorabQ8BRM2 368 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Dnttip2Q8R2M2 758 aaKnown RBP17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 AU015836B2RUM3 263 aa17.15■□□□□ 0.34
Col6a2-202ENSMUST00000105413 Magi1Q6RHR9 1471 aa17.14■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Rprd2Q6NXI6 1469 aaKnown RBP17.14■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Rab3gap2Q8BMG7 1366 aa17.14■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Sox12Q04890 314 aa17.14■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Pibf1E9Q6K3 756 aa17.13■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Q3TQI7 289 aaKnown RBP17.13■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Sart3Q9JLI8 962 aaKnown RBP17.13■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Plekhh1Q80TI1 1356 aa17.13■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Ak7Q9D2H2 614 aa17.12■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Pank1Q8K4K6 548 aa17.12■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Gm14025A2AP89 1413 aa17.12■□□□□ 0.33
Col6a2-202ENSMUST00000105413 G3bp1P97855 465 aaKnown RBP17.11■□□□□ 0.33
Col6a2-202ENSMUST00000105413 L3mbtl2P59178 703 aa17.11■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Ylpm1Q9R0I7 1386 aaKnown RBP17.1■□□□□ 0.33
Col6a2-202ENSMUST00000105413 Eif2s2Q99L45 331 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms