RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Cngb1E1AZ71 1325 aa19.75■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Stk3Q9JI10 497 aa19.73■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Slit2Q9R1B9 1521 aa19.72■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Cnksr2Q80YA9 1032 aa19.72■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Tmem132aQ922P8 1018 aa19.72■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Cul9Q80TT8 1865 aa19.71■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 Kiaa0556Q8C753 1610 aa19.7■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 Zbtb38Q3LR78 1197 aa19.7■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 Stk25Q9Z2W1 426 aa19.69■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 WrnO09053 1401 aa19.68■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 Yeats2Q3TUF7 1407 aa19.68■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 Pdap1Q3UHX2 181 aaKnown RBP19.67■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 NinlQ6ZQ12 1394 aa19.67■□□□□ 0.74
Hmgb1-202ENSMUST00000093196 Nyap1Q6PFX7 833 aa19.64■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Gm7298A0A0N4SVU1 1476 aa19.64■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Atad2Q8CDM1 1040 aa19.62■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Pitpnm1O35954 1243 aa19.61■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 ChgaP26339 463 aaKnown RBP19.61■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Talpid3E9PV87 1520 aa19.6■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Rapgef6Q5NCJ1 1609 aa19.59■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Abca6Q8K441 1624 aa19.59■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Prex2Q3LAC4 1598 aa19.59■□□□□ 0.73
Hmgb1-202ENSMUST00000093196 Stag3O70576 1240 aa19.58■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Cypt2Q6P924 180 aa19.58■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Abca9Q8K449 1623 aa19.58■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Zmym4A2A791 1549 aaKnown RBP19.57■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Mlh3A0A1Y7VMP7 1443 aa19.57■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Arhgap23Q69ZH9 1483 aa19.56■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 VaspP70460 375 aaKnown RBP19.56■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Dip2bQ3UH60 1574 aa19.55■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Stk24Q99KH8 431 aa19.53■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Gcc2Q8CHG3 1679 aa19.52■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Arhgap31A6X8Z5 1425 aa19.52■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Rims2Q9EQZ7 1530 aa19.52■□□□□ 0.72
Hmgb1-202ENSMUST00000093196 Ncapd3Q6ZQK0 1506 aa19.51■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Myom2Q14BI5 1463 aa19.51■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 AlkP97793 1621 aa19.51■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 PygbQ8CI94 843 aaKnown RBP19.49■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Phlpp1Q8CHE4 1687 aa19.48■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Ccdc141E9Q8Q6 1531 aa19.46■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Ptch1Q61115 1434 aa19.46■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Trim35Q8C006 501 aa19.46■□□□□ 0.71
Hmgb1-202ENSMUST00000093196 Zc3h13E9Q784 1729 aaKnown RBP19.45■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Kiaa1210E9Q0C6 1637 aa19.44■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Hecw1Q8K4P8 1604 aa19.43■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Cfap65Q3V0B4 1847 aa19.42■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Mroh2aD3Z750 1679 aa19.42■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Ric3Q8BPM6 367 aa19.41■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Arhgef1Q61210 920 aaKnown RBP19.4■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Dip2cE9PWR4 1557 aa19.4■□□□□ 0.7
Hmgb1-202ENSMUST00000093196 Sgip1Q8VD37 806 aa19.39■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 PzpQ61838 1495 aa19.38■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 Rapgef3Q8VCC8 918 aa19.38■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 Mier1Q5UAK0 511 aa19.36■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 Kdm2bQ6P1G2 1309 aa19.35■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 RereQ80TZ9 1558 aa19.33■□□□□ 0.69
Hmgb1-202ENSMUST00000093196 Fancd2Q80V62 1450 aa19.33■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Rimbp3Q3V0F0 1606 aa19.33■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Slc7a3P70423 618 aa19.32■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Dennd4bQ3U1Y4 1499 aa19.32■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Mroh2bQ7M6Y6 1581 aa19.31■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Bcl9Q9D219 1425 aa19.3■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Rapgefl1Q68EF8 662 aa19.29■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Adgrb2Q8CGM1 1561 aa19.28■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Rgs17Q9QZB0 210 aa19.28■□□□□ 0.68
Hmgb1-202ENSMUST00000093196 Tom1O88746 492 aa19.26■□□□□ 0.67
Hmgb1-202ENSMUST00000093196 Afap1Q80YS6 731 aa19.26■□□□□ 0.67
Hmgb1-202ENSMUST00000093196 DnmbpQ6TXD4 1580 aa19.26■□□□□ 0.67
Hmgb1-202ENSMUST00000093196 CrebzfQ91ZR3 358 aa19.24■□□□□ 0.67
Hmgb1-202ENSMUST00000093196 Fnbp4Q6ZQ03 1031 aa19.22■□□□□ 0.67
Hmgb1-202ENSMUST00000093196 SnphQ80U23 495 aa19.19■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Map3k1P53349 1493 aa19.19■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Scaf11E9PZM7 1456 aaKnown RBP19.18■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 ArxO35085 564 aa19.18■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Kdm5cP41230 1554 aa19.18■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Carmil1Q6EDY6 1374 aa19.18■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Kdm3bQ6ZPY7 1562 aa19.17■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Ankrd26Q811D2 1581 aa19.17■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Lemd3Q9WU40 921 aa19.16■□□□□ 0.66
Hmgb1-202ENSMUST00000093196 Adgrl1Q80TR1 1466 aa19.14■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Tubgcp6G5E8P0 1769 aa19.12■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Zc3h15Q3TIV5 426 aaKnown RBP19.11■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Pcdhb17Q91VD8 799 aa19.1■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Kdm2aP59997 1161 aa19.09■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Ripply1Q2WG77 201 aa19.09■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Kidins220E9Q9B7 1793 aa19.09■□□□□ 0.65
Hmgb1-202ENSMUST00000093196 Sema6bO54951 886 aa19.08■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 GphnQ8BUV3 769 aaKnown RBP19.08■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Ak7Q9D2H2 614 aa19.07■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Trpm2Q91YD4 1506 aa19.06■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Kif21bQ9QXL1 1668 aa19.06■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 BlmO88700 1416 aa19.06■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Nhsl1Q8CAF4 1587 aa19.04■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Slc24a3Q99PD7 645 aa19.03■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 PtprvP70289 1705 aa19.03■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Erich3F6QRE9 1637 aa19.02■□□□□ 0.64
Hmgb1-202ENSMUST00000093196 Arap1Q4LDD4 1452 aa19.02■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Ncoa2Q61026 1462 aa19.02■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Tiam1Q60610 1591 aa19.02■□□□□ 0.63
Hmgb1-202ENSMUST00000093196 Cdk13Q69ZA1 1511 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms