RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 BbxQ8VBW5 907 aa20.23■□□□□ 0.83
Col17a1-202ENSMUST00000086923 St18Q80TY4 1045 aa20.23■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Cbx1P83917 185 aaKnown RBP20.21■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Plcd3Q8K2J0 785 aa20.21■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Def6Q8C2K1 630 aa20.21■□□□□ 0.83
Col17a1-202ENSMUST00000086923 Tmco5bQ80X59 307 aa20.2■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Ccdc183A2AJB1 534 aa20.19■□□□□ 0.82
Col17a1-202ENSMUST00000086923 NacadQ5SWP3 1504 aa20.19■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Zfp777B9EKF4 885 aa20.18■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Golga2Q921M4 999 aa20.18■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Mroh3A0A1D5RM54 893 aa20.18■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Rassf8Q8CJ96 419 aa20.17■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Cdkn1cP49919 348 aa20.17■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Sh3bgrQ9WUZ7 214 aa20.16■□□□□ 0.82
Col17a1-202ENSMUST00000086923 U2surpQ6NV83 1029 aaKnown RBP20.16■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Filip1lQ6P6L0 1131 aa20.15■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Kif16bB1AVY7 1312 aa20.15■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Polr3gQ6NXY9 223 aa20.15■□□□□ 0.82
Col17a1-202ENSMUST00000086923 Zhx1P70121 873 aa20.14■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Gm20521D3Z5F7 333 aa20.13■□□□□ 0.81
Col17a1-202ENSMUST00000086923 AppP12023 770 aa20.13■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Znhit6Q3UFB2 460 aaKnown RBP20.13■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Arid4aF8VPQ2 1261 aaKnown RBP20.13■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Srpk2O54781 681 aaKnown RBP20.12■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Exosc9Q9JHI7 438 aaKnown RBP20.12■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Mns1Q61884 491 aa20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Pkd2O35245 966 aa20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Hmgn5Q9JL35 406 aa20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Tnpo1Q8BFY9 898 aaKnown RBP20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Nap1l3Q794H2 544 aa20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 KarsQ99MN1 595 aaKnown RBP20.11■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Golga3P55937 1487 aa20.1■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Paf1Q8K2T8 535 aa20.1■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Ccdc146E9Q9F7 977 aa20.1■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Gps2Q921N8 327 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Ccer1Q9CQL2 403 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Baz1bQ9Z277 1479 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Tmf1B9EKI3 1091 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Plppr3Q7TPB0 716 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 IqubQ8CDK3 788 aa20.09■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Ksr2Q3UVC0 959 aa20.08■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Mical1Q8VDP3 1048 aa20.08■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Ssh1Q76I79 1042 aa20.08■□□□□ 0.81
Col17a1-202ENSMUST00000086923 Tmem132aQ922P8 1018 aa20.08■□□□□ 0.8
Col17a1-202ENSMUST00000086923 NcapgE9PWG6 1004 aa20.07■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Cnga1P29974 684 aa20.06■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Clstn1Q9EPL2 979 aa20.06■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Pde3bQ61409 1100 aa20.06■□□□□ 0.8
Col17a1-202ENSMUST00000086923 NaspQ99MD9 773 aaKnown RBP20.05■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Ercc6F8VPZ5 1481 aa20.05■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Cgnl1Q6AW69 1298 aa20.05■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Ccar1Q8CH18 1146 aaKnown RBP20.05■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Mex3cQ05A36 652 aaKnown RBP20.04■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Gse1Q3U3C9 1213 aa20.04■□□□□ 0.8
Col17a1-202ENSMUST00000086923 MecomP14404 1042 aa20.04■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Kcnj4P52189 445 aa20.03■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Anapc15-psA0A140T8L6 141 aa20.02■□□□□ 0.8
Col17a1-202ENSMUST00000086923 U2af1Q9D883 239 aaKnown RBP20.02■□□□□ 0.8
Col17a1-202ENSMUST00000086923 Rufy1Q8BIJ7 712 aa20.01■□□□□ 0.79
Col17a1-202ENSMUST00000086923 CastP51125 788 aa20■□□□□ 0.79
Col17a1-202ENSMUST00000086923 PogkQ80TC5 607 aa19.99■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Tnnt1O88346 262 aa19.98■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Olfml1Q8BSH2 233 aa19.98■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Rsph6aQ8CDR2 708 aa19.98■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Eif4g2Q62448 906 aaKnown RBP19.97■□□□□ 0.79
Col17a1-202ENSMUST00000086923 A0A0U1RNP2 1173 aa19.97■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Tpm1P58771 284 aa19.97■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Bicd2Q921C5 820 aa19.97■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Rrp7aQ9D1C9 280 aaKnown RBP19.96■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Kcnh8P59111 1102 aa19.96■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Fam193aQ8CGI1 1231 aaKnown RBP19.96■□□□□ 0.79
Col17a1-202ENSMUST00000086923 Frmd3Q8BHD4 595 aa19.95■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Chaf1aQ9QWF0 911 aa19.95■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Gabpb2P81069 414 aa19.94■□□□□ 0.78
Col17a1-202ENSMUST00000086923 KinQ8K339 391 aa19.94■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Atl3Q91YH5 541 aa19.94■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Tex2Q6ZPJ0 1128 aaKnown RBP19.94■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Nop14Q8R3N1 860 aaKnown RBP19.94■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Mphosph9A6H5Y1 991 aa19.93■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Mtus2Q3UHD3 1353 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Brpf1B2RRD7 1212 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Trim58Q5NCC9 485 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Arglu1Q3UL36 271 aaKnown RBP19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Sptbn5F6UCX4 1208 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Mcm4P49717 862 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Dcaf11Q91VU6 549 aa19.92■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Phactr2B1AVP0 632 aa19.91■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Ccdc83Q9D4V3 305 aa19.91■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Tmco3Q8BH01 678 aa19.91■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Safb2Q80YR5 991 aaKnown RBP19.9■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Ppp2r3aB2RXC8 1150 aa19.9■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Stag3O70576 1240 aa19.9■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Fyco1Q8VDC1 1437 aa19.9■□□□□ 0.78
Col17a1-202ENSMUST00000086923 Sparcl1P70663 650 aa19.89■□□□□ 0.78
Col17a1-202ENSMUST00000086923 OptnQ8K3K8 584 aa19.89■□□□□ 0.77
Col17a1-202ENSMUST00000086923 Gcom1E9PZ54 550 aa19.89■□□□□ 0.77
Col17a1-202ENSMUST00000086923 MyzapQ3UIJ9 466 aa19.89■□□□□ 0.77
Col17a1-202ENSMUST00000086923 Rock1P70335 1354 aa19.89■□□□□ 0.77
Col17a1-202ENSMUST00000086923 Ecm2Q5FW85 670 aa19.89■□□□□ 0.77
Col17a1-202ENSMUST00000086923 Nol12Q8BG17 217 aa19.89■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms