RNA–Protein interactions for RNA: ENSMUST00000026073.12

Trub1-202, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trub1, Length 3,795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-202ENSMUST00000026073 Cux1P53564 1515 aa11.54□□□□□ -0.56
Trub1-202ENSMUST00000026073 Zfp444Q3TDV8 331 aaKnown RBP11.53□□□□□ -0.56
Trub1-202ENSMUST00000026073 Safb2Q80YR5 991 aaKnown RBP11.53□□□□□ -0.56
Trub1-202ENSMUST00000026073 U2af1Q9D883 239 aaKnown RBP11.53□□□□□ -0.56
Trub1-202ENSMUST00000026073 Gm7298A0A0N4SVU1 1476 aa11.53□□□□□ -0.56
Trub1-202ENSMUST00000026073 Tmco5bQ80X59 307 aa11.52□□□□□ -0.56
Trub1-202ENSMUST00000026073 Rusc2Q80U22 1514 aa11.52□□□□□ -0.56
Trub1-202ENSMUST00000026073 Pcf11G3X9Z4 1553 aa11.52□□□□□ -0.57
Trub1-202ENSMUST00000026073 Dnai1Q8C0M8 701 aa11.52□□□□□ -0.57
Trub1-202ENSMUST00000026073 Golga2Q921M4 999 aa11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 Gtf2e1Q9D0D5 440 aa11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 Sart3Q9JLI8 962 aaKnown RBP11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 A2mQ6GQT1 1474 aa11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 Slx4Q6P1D7 1565 aa11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 Plcb2A3KGF7 1181 aa11.51□□□□□ -0.57
Trub1-202ENSMUST00000026073 Washc2Q6PGL7 1334 aa11.5□□□□□ -0.57
Trub1-202ENSMUST00000026073 Neo1P97798 1493 aa11.49□□□□□ -0.57
Trub1-202ENSMUST00000026073 Ksr2Q3UVC0 959 aa11.49□□□□□ -0.57
Trub1-202ENSMUST00000026073 Naip2Q9QUK4 1447 aa11.49□□□□□ -0.57
Trub1-202ENSMUST00000026073 Eif2s2Q99L45 331 aaKnown RBP11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 EspnQ9ET47 871 aa11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 Irx3P81067 507 aa11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 Zscan10Q3URR7 782 aa11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 IqubQ8CDK3 788 aa11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 Grin2aP35436 1464 aa11.48□□□□□ -0.57
Trub1-202ENSMUST00000026073 Jph4Q80WT0 628 aa11.47□□□□□ -0.57
Trub1-202ENSMUST00000026073 Ttll13A4Q9F6 804 aa11.47□□□□□ -0.57
Trub1-202ENSMUST00000026073 Ppm1gQ61074 542 aa11.47□□□□□ -0.57
Trub1-202ENSMUST00000026073 Pibf1E9Q6K3 756 aa11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 CadpsQ80TJ1 1355 aa11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 Map3k1P53349 1493 aa11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 Birc3O08863 600 aa11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 U2surpQ6NV83 1029 aaKnown RBP11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 Pank1Q8K4K6 548 aa11.46□□□□□ -0.57
Trub1-202ENSMUST00000026073 Mapk8ip3Q9ESN9 1337 aa11.46□□□□□ -0.58
Trub1-202ENSMUST00000026073 GorabQ8BRM2 368 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Mfap1aC0HKD8 439 aaKnown RBP11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Mfap1bC0HKD9 439 aaKnown RBP11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Map3k5O35099 1380 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Kif7B7ZNG0 1348 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Fgd1P52734 960 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Hdac5Q9Z2V6 1113 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 TchhA0A0B4J1F9 1599 aa11.45□□□□□ -0.58
Trub1-202ENSMUST00000026073 Gm14025A2AP89 1413 aa11.44□□□□□ -0.58
Trub1-202ENSMUST00000026073 Samd9lQ69Z37 1561 aa11.44□□□□□ -0.58
Trub1-202ENSMUST00000026073 Liat1Q810M6 228 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 Naip5Q9R016 1403 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 PtprtQ99M80 1454 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 Rock1P70335 1354 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 Fam184bQ0KK56 942 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 Usp40Q8BWR4 1235 aa11.43□□□□□ -0.58
Trub1-202ENSMUST00000026073 Spag9Q58A65 1321 aaKnown RBP11.42□□□□□ -0.58
Trub1-202ENSMUST00000026073 Abcc1O35379 1528 aa11.42□□□□□ -0.58
Trub1-202ENSMUST00000026073 Arhgap31A6X8Z5 1425 aa11.41□□□□□ -0.58
Trub1-202ENSMUST00000026073 EprsQ8CGC7 1512 aaKnown RBP11.41□□□□□ -0.58
Trub1-202ENSMUST00000026073 Nutm1Q8BHP2 1126 aa11.41□□□□□ -0.58
Trub1-202ENSMUST00000026073 Ankrd26Q811D2 1581 aa11.41□□□□□ -0.58
Trub1-202ENSMUST00000026073 Sall3Q62255 1320 aa11.41□□□□□ -0.58
Trub1-202ENSMUST00000026073 Cep170Q6A065 1588 aa11.4□□□□□ -0.58
Trub1-202ENSMUST00000026073 KarsQ99MN1 595 aaKnown RBP11.4□□□□□ -0.58
Trub1-202ENSMUST00000026073 Ak7Q9D2H2 614 aa11.4□□□□□ -0.58
Trub1-202ENSMUST00000026073 Abcc5Q9R1X5 1436 aa11.4□□□□□ -0.58
Trub1-202ENSMUST00000026073 Apaf1O88879 1249 aa11.4□□□□□ -0.59
Trub1-202ENSMUST00000026073 Ccdc30Q8BVF4 654 aa11.4□□□□□ -0.59
Trub1-202ENSMUST00000026073 Ncoa2Q61026 1462 aa11.39□□□□□ -0.59
Trub1-202ENSMUST00000026073 Lemd3Q9WU40 921 aa11.39□□□□□ -0.59
Trub1-202ENSMUST00000026073 Nup160Q9Z0W3 1402 aaKnown RBP11.39□□□□□ -0.59
Trub1-202ENSMUST00000026073 Lmod3E9QA62 571 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Tsen2Q6P7W5 460 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Ipo8Q7TMY7 1010 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 NudcO35685 332 aaKnown RBP11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 NexmifQ5DTT1 1515 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Nectin2P32507 530 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Pde4cQ3UEI1 686 aa11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Dnttip2Q8R2M2 758 aaKnown RBP11.38□□□□□ -0.59
Trub1-202ENSMUST00000026073 Kif16bB1AVY7 1312 aa11.37□□□□□ -0.59
Trub1-202ENSMUST00000026073 Gtf3c3Q3TMP1 882 aa11.37□□□□□ -0.59
Trub1-202ENSMUST00000026073 Plcd4Q8K3R3 807 aa11.37□□□□□ -0.59
Trub1-202ENSMUST00000026073 Tspyl2Q7TQI8 677 aa11.36□□□□□ -0.59
Trub1-202ENSMUST00000026073 Ppp2r1aQ76MZ3 589 aa11.36□□□□□ -0.59
Trub1-202ENSMUST00000026073 Gm1043A0A140LJC2 1431 aa11.36□□□□□ -0.59
Trub1-202ENSMUST00000026073 Mink1Q9JM52 1308 aa11.36□□□□□ -0.59
Trub1-202ENSMUST00000026073 Chmp4cQ9D7F7 232 aa11.35□□□□□ -0.59
Trub1-202ENSMUST00000026073 Sox12Q04890 314 aa11.34□□□□□ -0.59
Trub1-202ENSMUST00000026073 Stk11ipQ3TAA7 1072 aa11.34□□□□□ -0.59
Trub1-202ENSMUST00000026073 Htatsf1Q8BGC0 757 aa11.34□□□□□ -0.59
Trub1-202ENSMUST00000026073 Ccdc60Q8C4J0 545 aa11.33□□□□□ -0.59
Trub1-202ENSMUST00000026073 Cc2d1aQ8K1A6 943 aa11.33□□□□□ -0.59
Trub1-202ENSMUST00000026073 Trim44Q9QXA7 346 aa11.33□□□□□ -0.59
Trub1-202ENSMUST00000026073 Tnnt1O88346 262 aa11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Rfx1P48377 963 aa11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Dnajc5gQ8C632 165 aa11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Prkrip1Q9CWV6 186 aaKnown RBP11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Ncoa1P70365 1447 aa11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Atxn3Q9CVD2 355 aa11.33□□□□□ -0.6
Trub1-202ENSMUST00000026073 Iqcf3Q9D498 203 aa11.32□□□□□ -0.6
Trub1-202ENSMUST00000026073 Mbd3Q9Z2D8 285 aaKnown RBP11.32□□□□□ -0.6
Trub1-202ENSMUST00000026073 Ccdc9Q8VC31 543 aaKnown RBP11.32□□□□□ -0.6
Trub1-202ENSMUST00000026073 Cd109Q8R422 1442 aa11.32□□□□□ -0.6
Trub1-202ENSMUST00000026073 PrxO55103 1391 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms