RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Tpm4Q6IRU2 248 aa17.05■□□□□ 0.32
Chd1-202ENSMUST00000024627 Pip4k2bQ80XI4 416 aa17.05■□□□□ 0.32
Chd1-202ENSMUST00000024627 Drc7Q6V3W6 876 aa17.04■□□□□ 0.32
Chd1-202ENSMUST00000024627 Ccdc43Q9CR29 222 aaKnown RBP17.04■□□□□ 0.32
Chd1-202ENSMUST00000024627 Kif27Q7M6Z4 1394 aa17.04■□□□□ 0.32
Chd1-202ENSMUST00000024627 Smarce1O54941 411 aaKnown RBP17.04■□□□□ 0.32
Chd1-202ENSMUST00000024627 Ccdc96Q9CR92 584 aa17.04■□□□□ 0.32
Chd1-202ENSMUST00000024627 IbspQ61711 324 aa17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 AU015836B2RUM3 263 aa17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 Klf15Q9EPW2 415 aa17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 Sin3aQ60520 1274 aaKnown RBP17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 Eif2s2Q99L45 331 aaKnown RBP17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 PtmsQ9D0J8 101 aaKnown RBP17.03■□□□□ 0.32
Chd1-202ENSMUST00000024627 Kif3bQ61771 747 aa17.02■□□□□ 0.32
Chd1-202ENSMUST00000024627 Mia2Q91ZV0 1396 aa17.02■□□□□ 0.32
Chd1-202ENSMUST00000024627 Exoc6Q8R313 802 aa17.02■□□□□ 0.31
Chd1-202ENSMUST00000024627 Sytl4Q9R0Q1 673 aa17.01■□□□□ 0.31
Chd1-202ENSMUST00000024627 Chmp4cQ9D7F7 232 aa17.01■□□□□ 0.31
Chd1-202ENSMUST00000024627 Ccdc146E9Q9F7 977 aa17■□□□□ 0.31
Chd1-202ENSMUST00000024627 Gabpb2P81069 414 aa17■□□□□ 0.31
Chd1-202ENSMUST00000024627 SlkO54988 1233 aa17■□□□□ 0.31
Chd1-202ENSMUST00000024627 Rock2P70336 1388 aa16.99■□□□□ 0.31
Chd1-202ENSMUST00000024627 FosbP13346 338 aa16.99■□□□□ 0.31
Chd1-202ENSMUST00000024627 Fan1Q69ZT1 1020 aa16.99■□□□□ 0.31
Chd1-202ENSMUST00000024627 BcanQ61361 883 aa16.98■□□□□ 0.31
Chd1-202ENSMUST00000024627 Ccp110Q7TSH4 1004 aa16.98■□□□□ 0.31
Chd1-202ENSMUST00000024627 Odf2A3KGV1 830 aaKnown RBP16.98■□□□□ 0.31
Chd1-202ENSMUST00000024627 Ipo8Q7TMY7 1010 aa16.98■□□□□ 0.31
Chd1-202ENSMUST00000024627 Zscan21Q07231 555 aa16.97■□□□□ 0.31
Chd1-202ENSMUST00000024627 A0A0U1RNP2 1173 aa16.97■□□□□ 0.31
Chd1-202ENSMUST00000024627 Utp14aQ640M1 767 aaKnown RBP16.97■□□□□ 0.31
Chd1-202ENSMUST00000024627 Tpm2P58774 284 aa16.96■□□□□ 0.31
Chd1-202ENSMUST00000024627 Polr3gQ6NXY9 223 aa16.95■□□□□ 0.3
Chd1-202ENSMUST00000024627 Irx3P81067 507 aa16.95■□□□□ 0.3
Chd1-202ENSMUST00000024627 Eva1cP58659 440 aa16.95■□□□□ 0.3
Chd1-202ENSMUST00000024627 Golga3P55937 1487 aa16.95■□□□□ 0.3
Chd1-202ENSMUST00000024627 Neurod6P48986 337 aa16.94■□□□□ 0.3
Chd1-202ENSMUST00000024627 Trim30aP15533 496 aa16.93■□□□□ 0.3
Chd1-202ENSMUST00000024627 Sf3a1Q8K4Z5 791 aaKnown RBP16.92■□□□□ 0.3
Chd1-202ENSMUST00000024627 Srcin1Q9QWI6 1250 aa16.92■□□□□ 0.3
Chd1-202ENSMUST00000024627 Cabp1Q9JLK7 227 aa16.92■□□□□ 0.3
Chd1-202ENSMUST00000024627 NacadQ5SWP3 1504 aa16.91■□□□□ 0.3
Chd1-202ENSMUST00000024627 Tceal9Q9DD24 104 aa16.9■□□□□ 0.3
Chd1-202ENSMUST00000024627 Tpm1P58771 284 aa16.9■□□□□ 0.3
Chd1-202ENSMUST00000024627 Becn1O88597 448 aa16.89■□□□□ 0.3
Chd1-202ENSMUST00000024627 Stk31Q99MW1 1018 aa16.89■□□□□ 0.29
Chd1-202ENSMUST00000024627 Utp3Q9JI13 469 aaKnown RBP16.89■□□□□ 0.29
Chd1-202ENSMUST00000024627 Tsen2Q6P7W5 460 aa16.89■□□□□ 0.29
Chd1-202ENSMUST00000024627 March6Q6ZQ89 909 aa16.88■□□□□ 0.29
Chd1-202ENSMUST00000024627 Gm21190A0A0G2JGJ6 266 aa16.88■□□□□ 0.29
Chd1-202ENSMUST00000024627 Mphosph9A6H5Y1 991 aa16.88■□□□□ 0.29
Chd1-202ENSMUST00000024627 Ddx11Q6AXC6 880 aa16.88■□□□□ 0.29
Chd1-202ENSMUST00000024627 Filip1lQ6P6L0 1131 aa16.87■□□□□ 0.29
Chd1-202ENSMUST00000024627 Smc4Q8CG47 1286 aa16.87■□□□□ 0.29
Chd1-202ENSMUST00000024627 ChgaP26339 463 aaKnown RBP16.87■□□□□ 0.29
Chd1-202ENSMUST00000024627 Chmp7Q8R1T1 451 aa16.87■□□□□ 0.29
Chd1-202ENSMUST00000024627 Abl1P00520 1123 aa16.86■□□□□ 0.29
Chd1-202ENSMUST00000024627 CrcpO35427 148 aa16.86■□□□□ 0.29
Chd1-202ENSMUST00000024627 Sh3bgrQ9WUZ7 214 aa16.85■□□□□ 0.29
Chd1-202ENSMUST00000024627 Baz1aO88379 1555 aa16.85■□□□□ 0.29
Chd1-202ENSMUST00000024627 Cplx1P63040 134 aa16.85■□□□□ 0.29
Chd1-202ENSMUST00000024627 Rbm5Q91YE7 815 aaKnown RBP16.85■□□□□ 0.29
Chd1-202ENSMUST00000024627 MycnP03966 462 aaKnown RBP16.84■□□□□ 0.29
Chd1-202ENSMUST00000024627 Nap1l1P28656 391 aaKnown RBP16.84■□□□□ 0.29
Chd1-202ENSMUST00000024627 Aebp1Q640N1 1128 aa16.84■□□□□ 0.29
Chd1-202ENSMUST00000024627 Sf3b2Q3UJB0 878 aaKnown RBP16.83■□□□□ 0.29
Chd1-202ENSMUST00000024627 Sycp1Q62209 993 aa16.83■□□□□ 0.29
Chd1-202ENSMUST00000024627 Nap1l3Q794H2 544 aa16.83■□□□□ 0.29
Chd1-202ENSMUST00000024627 Bcl2l13P59017 434 aa16.83■□□□□ 0.28
Chd1-202ENSMUST00000024627 Ccdc60Q8C4J0 545 aa16.83■□□□□ 0.28
Chd1-202ENSMUST00000024627 CenpjQ569L8 1344 aa16.83■□□□□ 0.28
Chd1-202ENSMUST00000024627 Mink1Q9JM52 1308 aa16.82■□□□□ 0.28
Chd1-202ENSMUST00000024627 Nup155Q99P88 1391 aaKnown RBP16.81■□□□□ 0.28
Chd1-202ENSMUST00000024627 Ipo9Q91YE6 1041 aa16.81■□□□□ 0.28
Chd1-202ENSMUST00000024627 Atp6v1dP57746 247 aa16.8■□□□□ 0.28
Chd1-202ENSMUST00000024627 St18Q80TY4 1045 aa16.8■□□□□ 0.28
Chd1-202ENSMUST00000024627 Fyb1O35601 819 aa16.8■□□□□ 0.28
Chd1-202ENSMUST00000024627 Ipo4Q8VI75 1082 aa16.79■□□□□ 0.28
Chd1-202ENSMUST00000024627 Rfx1P48377 963 aa16.79■□□□□ 0.28
Chd1-202ENSMUST00000024627 Podxl2Q8CAE9 603 aa16.79■□□□□ 0.28
Chd1-202ENSMUST00000024627 Shq1Q7TMX5 569 aa16.79■□□□□ 0.28
Chd1-202ENSMUST00000024627 Cplx2P84086 134 aa16.78■□□□□ 0.28
Chd1-202ENSMUST00000024627 Rrp12Q6P5B0 1295 aaKnown RBP16.78■□□□□ 0.28
Chd1-202ENSMUST00000024627 Baz1bQ9Z277 1479 aa16.78■□□□□ 0.28
Chd1-202ENSMUST00000024627 Hnrnpul1Q8VDM6 859 aaKnown RBP16.77■□□□□ 0.28
Chd1-202ENSMUST00000024627 Phactr2B1AVP0 632 aa16.77■□□□□ 0.28
Chd1-202ENSMUST00000024627 Rec8Q8C5S7 591 aa16.77■□□□□ 0.27
Chd1-202ENSMUST00000024627 Gtf2f1Q3THK3 508 aaKnown RBP16.77■□□□□ 0.27
Chd1-202ENSMUST00000024627 Erich4Q3UNU4 136 aa16.77■□□□□ 0.27
Chd1-202ENSMUST00000024627 Rsph3aQ3UFY4 516 aa16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 Rsph6aQ8CDR2 708 aa16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 Bcl11aQ9QYE3 773 aa16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 Map7d2A2AG50 781 aa16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 Bicd2Q921C5 820 aa16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 IkQ9Z1M8 557 aaKnown RBP16.76■□□□□ 0.27
Chd1-202ENSMUST00000024627 Sirt1Q923E4 737 aa16.75■□□□□ 0.27
Chd1-202ENSMUST00000024627 Kcnn1Q9EQR3 537 aa16.75■□□□□ 0.27
Chd1-202ENSMUST00000024627 Q8C5K5 320 aa16.75■□□□□ 0.27
Chd1-202ENSMUST00000024627 Cspp1B2RX88 1205 aa16.75■□□□□ 0.27
Chd1-202ENSMUST00000024627 Kdm4aQ8BW72 1064 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms