RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Rhox8Q6VSS7 320 aa24.39■■□□□ 1.5
Chd1-202ENSMUST00000024627 Ehmt2Q9Z148 1263 aaKnown RBP22.39■■□□□ 1.18
Chd1-202ENSMUST00000024627 Ube2uB1AUC4 352 aa21.99■■□□□ 1.11
Chd1-202ENSMUST00000024627 Wdr66E9Q743 1299 aa21.75■■□□□ 1.07
Chd1-202ENSMUST00000024627 Esf1Q3V1V3 845 aaKnown RBP21.74■■□□□ 1.07
Chd1-202ENSMUST00000024627 Cngb1E1AZ71 1325 aa21.68■■□□□ 1.06
Chd1-202ENSMUST00000024627 Zeb1Q64318 1117 aa21.6■■□□□ 1.05
Chd1-202ENSMUST00000024627 Ccdc136Q3TVA9 1136 aa21.59■■□□□ 1.05
Chd1-202ENSMUST00000024627 Las1lA2BE28 776 aaKnown RBP21.51■■□□□ 1.03
Chd1-202ENSMUST00000024627 Pelp1Q9DBD5 1123 aaKnown RBP21.43■■□□□ 1.02
Chd1-202ENSMUST00000024627 Rpgrip1Q9EPQ2 1331 aa21.41■■□□□ 1.02
Chd1-202ENSMUST00000024627 Gab3Q8BSM5 595 aa21.34■■□□□ 1.01
Chd1-202ENSMUST00000024627 Npm2Q80W85 207 aa21.3■■□□□ 1
Chd1-202ENSMUST00000024627 Myt1lP97500 1187 aa21.21■□□□□ 0.99
Chd1-202ENSMUST00000024627 Amer1Q7TS75 1132 aa21.12■□□□□ 0.97
Chd1-202ENSMUST00000024627 Slc24a1Q91WD8 1130 aa20.92■□□□□ 0.94
Chd1-202ENSMUST00000024627 UbtfP25976 765 aaKnown RBP20.6■□□□□ 0.89
Chd1-202ENSMUST00000024627 Trim41Q5NCC3 630 aa20.59■□□□□ 0.89
Chd1-202ENSMUST00000024627 Ttbk1Q6PCN3 1308 aa20.51■□□□□ 0.87
Chd1-202ENSMUST00000024627 Il27Q8K3I6 234 aa20.36■□□□□ 0.85
Chd1-202ENSMUST00000024627 Neurod1Q60867 357 aa20.29■□□□□ 0.84
Chd1-202ENSMUST00000024627 Os9Q8K2C7 672 aa20.24■□□□□ 0.83
Chd1-202ENSMUST00000024627 CenpbP27790 599 aa20.2■□□□□ 0.82
Chd1-202ENSMUST00000024627 Stra8P70278 393 aa20.18■□□□□ 0.82
Chd1-202ENSMUST00000024627 4930567H17RikQ3V0K5 233 aa20.18■□□□□ 0.82
Chd1-202ENSMUST00000024627 Ap3b1Q9Z1T1 1105 aa20.16■□□□□ 0.82
Chd1-202ENSMUST00000024627 Eif5bQ05D44 1216 aaKnown RBP20.08■□□□□ 0.8
Chd1-202ENSMUST00000024627 Fam50aQ9WV03 339 aaKnown RBP20.05■□□□□ 0.8
Chd1-202ENSMUST00000024627 4933416C03RikQ3V063 378 aa20.05■□□□□ 0.8
Chd1-202ENSMUST00000024627 HrcG5E8J6 738 aa19.98■□□□□ 0.79
Chd1-202ENSMUST00000024627 Ppargc1bQ8VHJ7 1014 aa19.98■□□□□ 0.79
Chd1-202ENSMUST00000024627 Zbtb7cQ8VCZ7 619 aa19.94■□□□□ 0.78
Chd1-202ENSMUST00000024627 Chic1Q8CBW7 227 aa19.93■□□□□ 0.78
Chd1-202ENSMUST00000024627 NrdcQ8BHG1 1161 aa19.92■□□□□ 0.78
Chd1-202ENSMUST00000024627 NeflP08551 543 aa19.91■□□□□ 0.78
Chd1-202ENSMUST00000024627 NclP09405 707 aaKnown RBP19.89■□□□□ 0.77
Chd1-202ENSMUST00000024627 Anp32bQ9EST5 272 aaKnown RBP19.86■□□□□ 0.77
Chd1-202ENSMUST00000024627 NefmP08553 848 aa19.85■□□□□ 0.77
Chd1-202ENSMUST00000024627 NischQ80TM9 1593 aa19.84■□□□□ 0.77
Chd1-202ENSMUST00000024627 Ifnlr1Q8CGK5 535 aa19.75■□□□□ 0.75
Chd1-202ENSMUST00000024627 Rtl1Q7M732 1744 aa19.72■□□□□ 0.75
Chd1-202ENSMUST00000024627 Plppr3Q7TPB0 716 aa19.7■□□□□ 0.74
Chd1-202ENSMUST00000024627 Gm13697A2AK42 830 aa19.68■□□□□ 0.74
Chd1-202ENSMUST00000024627 Cdk11bP24788 784 aaKnown RBP19.68■□□□□ 0.74
Chd1-202ENSMUST00000024627 Acin1Q9JIX8 1338 aaKnown RBP19.68■□□□□ 0.74
Chd1-202ENSMUST00000024627 Gm35339A0A140LHH9 1649 aa19.67■□□□□ 0.74
Chd1-202ENSMUST00000024627 Ccdc180J3QNE4 1664 aa19.65■□□□□ 0.74
Chd1-202ENSMUST00000024627 Zbtb4Q5F293 982 aa19.61■□□□□ 0.73
Chd1-202ENSMUST00000024627 Hnrnpul2Q00PI9 745 aaKnown RBP19.6■□□□□ 0.73
Chd1-202ENSMUST00000024627 Atp1b4Q99ME6 356 aa19.55■□□□□ 0.72
Chd1-202ENSMUST00000024627 Prdm10Q3UTQ7 1184 aa19.54■□□□□ 0.72
Chd1-202ENSMUST00000024627 Nop58Q6DFW4 536 aaKnown RBP19.44■□□□□ 0.7
Chd1-202ENSMUST00000024627 Erich6D3Z6S9 713 aa19.42■□□□□ 0.7
Chd1-202ENSMUST00000024627 Polr3glQ8R0C0 218 aa19.37■□□□□ 0.69
Chd1-202ENSMUST00000024627 Gm13695A2AK44 830 aa19.33■□□□□ 0.69
Chd1-202ENSMUST00000024627 Abcc9P70170 1546 aa19.32■□□□□ 0.68
Chd1-202ENSMUST00000024627 ArxO35085 564 aa19.32■□□□□ 0.68
Chd1-202ENSMUST00000024627 Lmod2Q3UHZ5 550 aa19.3■□□□□ 0.68
Chd1-202ENSMUST00000024627 Zcchc6Q5BLK4 1491 aaKnown RBP19.29■□□□□ 0.68
Chd1-202ENSMUST00000024627 Tnnt3Q9QZ47 272 aa19.28■□□□□ 0.68
Chd1-202ENSMUST00000024627 Rangap1P46061 589 aaKnown RBP19.26■□□□□ 0.67
Chd1-202ENSMUST00000024627 TonslQ6NZL6 1363 aa19.26■□□□□ 0.67
Chd1-202ENSMUST00000024627 DiexfQ8BTT6 772 aaKnown RBP19.23■□□□□ 0.67
Chd1-202ENSMUST00000024627 Nlrp6Q91WS2 869 aa19.22■□□□□ 0.67
Chd1-202ENSMUST00000024627 Pcgf6Q99NA9 353 aa19.19■□□□□ 0.66
Chd1-202ENSMUST00000024627 Mapk8ip2Q9ERE9 830 aa19.14■□□□□ 0.65
Chd1-202ENSMUST00000024627 DaxxO35613 739 aa19.13■□□□□ 0.65
Chd1-202ENSMUST00000024627 Fkbp15Q6P9Q6 1216 aaKnown RBP19.13■□□□□ 0.65
Chd1-202ENSMUST00000024627 Npm1Q61937 292 aaKnown RBP19.09■□□□□ 0.65
Chd1-202ENSMUST00000024627 Plekhg3Q4VAC9 1341 aa19.08■□□□□ 0.64
Chd1-202ENSMUST00000024627 Myt1Q8CFC2 1127 aa19.06■□□□□ 0.64
Chd1-202ENSMUST00000024627 Supt5hO55201 1082 aaKnown RBP19.03■□□□□ 0.64
Chd1-202ENSMUST00000024627 Csrnp3P59055 597 aa18.95■□□□□ 0.62
Chd1-202ENSMUST00000024627 Mier1Q5UAK0 511 aa18.93■□□□□ 0.62
Chd1-202ENSMUST00000024627 CatipB9EKE5 520 aa18.9■□□□□ 0.62
Chd1-202ENSMUST00000024627 Ythdc1E9Q5K9 736 aaKnown RBP18.89■□□□□ 0.61
Chd1-202ENSMUST00000024627 Eid3Q3V124 375 aa18.78■□□□□ 0.6
Chd1-202ENSMUST00000024627 Safb2Q80YR5 991 aaKnown RBP18.77■□□□□ 0.6
Chd1-202ENSMUST00000024627 Gm38655A0A286YDK6 273 aa18.74■□□□□ 0.59
Chd1-202ENSMUST00000024627 P3h3Q8CG70 732 aa18.74■□□□□ 0.59
Chd1-202ENSMUST00000024627 Lmod3E9QA62 571 aa18.74■□□□□ 0.59
Chd1-202ENSMUST00000024627 Irx6Q9ER75 438 aa18.72■□□□□ 0.59
Chd1-202ENSMUST00000024627 Vsig10D3YX43 558 aa18.7■□□□□ 0.58
Chd1-202ENSMUST00000024627 Rtl5Q5DTT4 599 aa18.7■□□□□ 0.58
Chd1-202ENSMUST00000024627 Hsp90aa1P07901 733 aaKnown RBP18.66■□□□□ 0.58
Chd1-202ENSMUST00000024627 Rad21Q61550 635 aaKnown RBP18.66■□□□□ 0.58
Chd1-202ENSMUST00000024627 Trim26Q99PN3 545 aa18.61■□□□□ 0.57
Chd1-202ENSMUST00000024627 Anp32aO35381 247 aa18.59■□□□□ 0.57
Chd1-202ENSMUST00000024627 Upf2A2AT37 1269 aaKnown RBP18.58■□□□□ 0.57
Chd1-202ENSMUST00000024627 DekQ7TNV0 380 aaKnown RBP18.55■□□□□ 0.56
Chd1-202ENSMUST00000024627 Znf326O88291 580 aa18.53■□□□□ 0.56
Chd1-202ENSMUST00000024627 ClspnQ80YR7 1315 aa18.52■□□□□ 0.55
Chd1-202ENSMUST00000024627 Fgd1P52734 960 aa18.49■□□□□ 0.55
Chd1-202ENSMUST00000024627 Hdac5Q9Z2V6 1113 aa18.48■□□□□ 0.55
Chd1-202ENSMUST00000024627 Rtn4Q99P72 1162 aaKnown RBP18.47■□□□□ 0.55
Chd1-202ENSMUST00000024627 Clstn1Q9EPL2 979 aa18.47■□□□□ 0.55
Chd1-202ENSMUST00000024627 Chic2Q9D9G3 165 aa18.45■□□□□ 0.54
Chd1-202ENSMUST00000024627 Ppp4r2Q0VGB7 417 aa18.42■□□□□ 0.54
Chd1-202ENSMUST00000024627 Arid4bA2CG63 1314 aaKnown RBP18.39■□□□□ 0.54
Chd1-202ENSMUST00000024627 Ubl4bQ9CQ84 188 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms