RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Ralbp1Q62172 648 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Tsen2Q6P7W5 460 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Rassf8Q8CJ96 419 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Atp6v1dP57746 247 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Znf330Q922H9 316 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Vps8Q0P5W1 1427 aa15.38■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Cc2d2bA0A286YDU8 1405 aa15.37■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Inpp5dQ9ES52 1191 aa15.36■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Top2aQ01320 1528 aaKnown RBP15.36■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Nolc1E9Q5C9 702 aaKnown RBP15.36■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Utp14aQ640M1 767 aaKnown RBP15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 R3hcc1Q8BSI6 488 aa15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 HdgfP51859 237 aaKnown RBP15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Ylpm1Q9R0I7 1386 aaKnown RBP15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 MecomP14404 1042 aa15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Iffo2Q8R2V2 512 aa15.35■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Nol10Q5RJG1 687 aaKnown RBP15.34■□□□□ 0.05
Ldb3-201ENSMUST00000022327 GsdmaQ9EST1 446 aa15.34■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Usp40Q8BWR4 1235 aa15.33■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Pcmtd1P59913 357 aa15.33■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Zscan10Q3URR7 782 aa15.33■□□□□ 0.05
Ldb3-201ENSMUST00000022327 Nsd2Q8BVE8 1365 aa15.33■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Jph4Q80WT0 628 aa15.32■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Stk31Q99MW1 1018 aa15.32■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Kif7B7ZNG0 1348 aa15.32■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Tdrd9Q14BI7 1383 aa15.32■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Ciz1Q8VEH2 845 aa15.31■□□□□ 0.04
Ldb3-201ENSMUST00000022327 GorabQ8BRM2 368 aa15.3■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Anapc15P60007 132 aa15.3■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Znf316Q6PGE4 1016 aa15.3■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Calcoco2A2A6M5 331 aa15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Rab11fip3Q8CHD8 1047 aa15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 NrkQ9R0G8 1455 aa15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Tnnt1O88346 262 aa15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 MsnP26041 577 aaKnown RBP15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Rsph3aQ3UFY4 516 aa15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Rrp12Q6P5B0 1295 aaKnown RBP15.29■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Clstn1Q9EPL2 979 aa15.28■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Ccdc60Q8C4J0 545 aa15.28■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Mre11Q61216 706 aa15.28■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Sox12Q04890 314 aa15.27■□□□□ 0.04
Ldb3-201ENSMUST00000022327 ErbinQ80TH2 1402 aa15.27■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Prdm16A2A935 1275 aa15.27■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Trim58Q5NCC9 485 aa15.27■□□□□ 0.04
Ldb3-201ENSMUST00000022327 Naip1Q9QWK5 1403 aa15.27■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Cald1E9QA15 768 aaKnown RBP15.27■□□□□ 0.03
Ldb3-201ENSMUST00000022327 CgnP59242 1191 aa15.27■□□□□ 0.03
Ldb3-201ENSMUST00000022327 G3bp1P97855 465 aaKnown RBP15.27■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Dnai2A2AC93 623 aa15.26■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Ap3b2Q9JME5 1082 aa15.26■□□□□ 0.03
Ldb3-201ENSMUST00000022327 ChgaP26339 463 aaKnown RBP15.26■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Map3k1P53349 1493 aa15.26■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Ddrgk1Q80WW9 315 aa15.26■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Soga1E1U8D0 1418 aa15.25■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Ift140E9PY46 1464 aa15.25■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Tpm3-rs7D3Z2H9 248 aa15.25■□□□□ 0.03
Ldb3-201ENSMUST00000022327 RdxP26043 583 aaKnown RBP15.24■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Esx1O88933 382 aa15.24■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Glipr1l2Q9CQ35 332 aa15.24■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Brpf1B2RRD7 1212 aa15.23■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Ccdc146E9Q9F7 977 aa15.23■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Kif16bB1AVY7 1312 aa15.23■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Shq1Q7TMX5 569 aa15.22■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Cspp1B2RX88 1205 aa15.22■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Cc2d2aQ8CFW7 1633 aa15.22■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Atl3Q91YH5 541 aa15.22■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Tnnt2P50752 301 aa15.21■□□□□ 0.03
Ldb3-201ENSMUST00000022327 Pibf1E9Q6K3 756 aa15.21■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Prkrip1Q9CWV6 186 aaKnown RBP15.21■□□□□ 0.02
Ldb3-201ENSMUST00000022327 St18Q80TY4 1045 aa15.2■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Ecm2Q5FW85 670 aa15.2■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Arhgef5E9Q7D5 1581 aa15.2■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Ncapd3Q6ZQK0 1506 aa15.19■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Rpgrip1lQ8CG73 1264 aa15.18■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Ccdc30Q8BVF4 654 aa15.18■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Cabp4Q8VHC5 271 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Filip1lQ6P6L0 1131 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Chmp3Q9CQ10 224 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Becn1O88597 448 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Znf710Q3U288 666 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Pde4cQ3UEI1 686 aa15.17■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Casq1O09165 405 aa15.16■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Gprasp1Q5U4C1 1347 aa15.16■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Mink1Q9JM52 1308 aa15.16■□□□□ 0.02
Ldb3-201ENSMUST00000022327 SlkO54988 1233 aa15.16■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Duox2A2AQ99 1517 aa15.16■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Plekhh1Q80TI1 1356 aa15.15■□□□□ 0.02
Ldb3-201ENSMUST00000022327 PnisrA2AJT4 805 aaKnown RBP15.15■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Arap1Q4LDD4 1452 aa15.15■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Slc4a10Q5DTL9 1118 aa15.15■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Ak7Q9D2H2 614 aa15.15■□□□□ 0.02
Ldb3-201ENSMUST00000022327 Gnai1B2RSH2 354 aa15.14■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Gnai3Q9DC51 354 aa15.14■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Rabep1O35551 862 aa15.14■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Senp3Q9EP97 568 aaKnown RBP15.14■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Rad54l2Q99NG0 1466 aa15.14■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Gsto1O09131 240 aa15.13■□□□□ 0.01
Ldb3-201ENSMUST00000022327 VgfQ0VGU4 617 aa15.13■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Cetn4Q8K4K1 168 aa15.13■□□□□ 0.01
Ldb3-201ENSMUST00000022327 CrebrfQ8CDG5 640 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms