RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YCR061WP25639 631 aa3.86□□□□□ -1.79
VHS3YOR054C HOM6P31116 359 aaKnown RBP3.86□□□□□ -1.79
VHS3YOR054C STE14P32584 239 aa3.86□□□□□ -1.79
VHS3YOR054C DUT1P33317 147 aa3.86□□□□□ -1.79
VHS3YOR054C YKL151CP36059 337 aa3.86□□□□□ -1.79
VHS3YOR054C RCK1P38622 512 aa3.86□□□□□ -1.79
VHS3YOR054C YHR033WP38690 423 aa3.86□□□□□ -1.79
VHS3YOR054C RRP3P38712 501 aaKnown RBP3.86□□□□□ -1.79
VHS3YOR054C PAN5P38787 379 aa3.86□□□□□ -1.79
VHS3YOR054C AFG3P39925 761 aa3.86□□□□□ -1.79
VHS3YOR054C ISC1P40015 477 aaKnown RBP3.86□□□□□ -1.79
VHS3YOR054C FAU1P40099 211 aa3.86□□□□□ -1.79
VHS3YOR054C NTA1P40354 457 aa3.86□□□□□ -1.79
VHS3YOR054C COA1P40452 197 aa3.86□□□□□ -1.79
VHS3YOR054C GDS1P41913 522 aa3.86□□□□□ -1.79
VHS3YOR054C SPO74P45819 413 aa3.86□□□□□ -1.79
VHS3YOR054C SNG1P46950 547 aa3.86□□□□□ -1.79
VHS3YOR054C NIT2P47016 307 aa3.86□□□□□ -1.79
VHS3YOR054C ZAP1P47043 880 aa3.86□□□□□ -1.79
VHS3YOR054C GCV1P48015 400 aa3.86□□□□□ -1.79
VHS3YOR054C PHO23P50947 330 aa3.86□□□□□ -1.79
VHS3YOR054C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
VHS3YOR054C BOP2Q06150 570 aa3.86□□□□□ -1.79
VHS3YOR054C SWC7Q06707 132 aa3.86□□□□□ -1.79
VHS3YOR054C DDC1Q08949 612 aa3.86□□□□□ -1.79
VHS3YOR054C YPL245WQ12179 454 aaKnown RBP3.86□□□□□ -1.79
VHS3YOR054C RRP42Q12277 265 aaPredicted RBP3.86□□□□□ -1.79
VHS3YOR054C MDM12Q92328 271 aa3.86□□□□□ -1.79
VHS3YOR054C Q0182Q9ZZW1 134 aa3.86□□□□□ -1.79
VHS3YOR054C AI1P03875 834 aa3.85□□□□□ -1.79
VHS3YOR054C ADE4P04046 510 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C ERG20P08524 352 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C HOM3P10869 527 aa3.85□□□□□ -1.79
VHS3YOR054C NHP6BP11633 99 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C SEC12P11655 471 aa3.85□□□□□ -1.79
VHS3YOR054C ERD1P16151 362 aa3.85□□□□□ -1.79
VHS3YOR054C STE50P25344 346 aa3.85□□□□□ -1.79
VHS3YOR054C PER1P25625 357 aa3.85□□□□□ -1.79
VHS3YOR054C YCR090CP25654 182 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C CYS3P31373 394 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C NRP1P32770 719 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
VHS3YOR054C SFC1P33303 322 aa3.85□□□□□ -1.79
VHS3YOR054C SHP1P34223 423 aa3.85□□□□□ -1.79
VHS3YOR054C BET3P36149 193 aa3.85□□□□□ -1.79
VHS3YOR054C VRP1P37370 817 aa3.85□□□□□ -1.79
VHS3YOR054C SHG1P38337 142 aa3.85□□□□□ -1.79
VHS3YOR054C SSH1P38353 490 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C AIM46P38885 310 aa3.85□□□□□ -1.79
VHS3YOR054C AIM10P39965 576 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C ACA1P39970 489 aa3.85□□□□□ -1.79
VHS3YOR054C SPO73P40031 143 aa3.85□□□□□ -1.79
VHS3YOR054C LSM5P40089 93 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C POG1P40473 351 aa3.85□□□□□ -1.79
VHS3YOR054C YIL108WP40483 696 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C CFD1P40558 293 aa3.85□□□□□ -1.79
VHS3YOR054C SIP4P46954 829 aa3.85□□□□□ -1.79
VHS3YOR054C RPA34P47006 233 aaPredicted RBP3.85□□□□□ -1.79
VHS3YOR054C YJL132WP47014 750 aa3.85□□□□□ -1.79
VHS3YOR054C UFD1P53044 361 aa3.85□□□□□ -1.79
VHS3YOR054C TYW3P53177 273 aa3.85□□□□□ -1.79
VHS3YOR054C GTR2P53290 341 aa3.85□□□□□ -1.79
VHS3YOR054C GIP3Q03016 1276 aa3.85□□□□□ -1.79
VHS3YOR054C PLB2Q03674 706 aa3.85□□□□□ -1.79
VHS3YOR054C SKG3Q06315 1026 aa3.85□□□□□ -1.79
VHS3YOR054C YOR365CQ08844 703 aa3.85□□□□□ -1.79
VHS3YOR054C FYV7Q12247 151 aa3.85□□□□□ -1.79
VHS3YOR054C MHT1Q12525 324 aa3.85□□□□□ -1.79
VHS3YOR054C CTF3Q12748 733 aa3.85□□□□□ -1.79
VHS3YOR054C YEL009C-AA0A023PZF2 135 aa3.85□□□□□ -1.79
VHS3YOR054C ATP4P05626 244 aa3.85□□□□□ -1.79
VHS3YOR054C CDC7P06243 507 aa3.85□□□□□ -1.79
VHS3YOR054C CDC4P07834 779 aa3.85□□□□□ -1.79
VHS3YOR054C COX11P19516 300 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C YCP4P25349 247 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C YKL069WP36088 180 aa3.85□□□□□ -1.79
VHS3YOR054C IRS4P36115 615 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C ALY1P36117 915 aa3.85□□□□□ -1.79
VHS3YOR054C DTR1P38125 572 aa3.85□□□□□ -1.79
VHS3YOR054C PRE3P38624 215 aa3.85□□□□□ -1.79
VHS3YOR054C UBA4P38820 440 aa3.85□□□□□ -1.79
VHS3YOR054C NDT80P38830 627 aa3.85□□□□□ -1.79
VHS3YOR054C PRE6P40303 254 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C RFC4P40339 323 aaKnown RBP3.85□□□□□ -1.79
VHS3YOR054C TAM41P53230 385 aa3.85□□□□□ -1.79
VHS3YOR054C MTQ1P53944 314 aa3.85□□□□□ -1.79
VHS3YOR054C RKM2Q03942 479 aa3.85□□□□□ -1.79
VHS3YOR054C VBA1Q04301 562 aa3.85□□□□□ -1.79
VHS3YOR054C RTT103Q05543 409 aa3.85□□□□□ -1.79
VHS3YOR054C ANT1Q06497 328 aa3.85□□□□□ -1.79
VHS3YOR054C YOL019WQ08157 551 aa3.85□□□□□ -1.79
VHS3YOR054C THP1Q08231 455 aa3.85□□□□□ -1.79
VHS3YOR054C RTK1Q12100 620 aaPredicted RBP3.85□□□□□ -1.79
VHS3YOR054C SIA1Q12212 622 aa3.85□□□□□ -1.79
VHS3YOR054C MDY2Q12285 212 aa3.85□□□□□ -1.79
VHS3YOR054C SUT2Q12286 268 aa3.85□□□□□ -1.79
VHS3YOR054C JLP1Q12358 412 aa3.85□□□□□ -1.79
VHS3YOR054C RPS9AO13516 197 aaKnown RBP3.84□□□□□ -1.79
VHS3YOR054C SPT3P06844 337 aa3.84□□□□□ -1.79
VHS3YOR054C YPK1P12688 680 aaKnown RBP3.84□□□□□ -1.79
VHS3YOR054C MSN1P22148 382 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 142.6 ms