RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	PCL7	P40186	285 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	SEC9	P40357	651 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	RPN14	P53196	417 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	VHT1	P53241	593 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	YMR310C	Q04867	317 aa	Predicted RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	PML1	Q07930	204 aa	Predicted RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	RRP5	Q05022	1729 aa	Known RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	GAL3	P13045	520 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	MSI1	P13712	422 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	SAR1	P20606	190 aa	Known RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	DBR1	P24309	405 aa	Known RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	AVT5	P38176	459 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	TRF5	P48561	642 aa	Known RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	YIP5	P53108	310 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	CCE1	Q03702	353 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	IRC25	Q07951	179 aa		1.31	□□□□□ -2.2
SMC4	YLR086W	SNX3	Q08826	162 aa	Known RBP	1.31	□□□□□ -2.2
SMC4	YLR086W	SAM2	P19358	384 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	CKI1	P20485	582 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	CPR4	P25334	318 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	CHA1	P25379	360 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	VPH2	P32341	215 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	DPH5	P32469	300 aa	Predicted RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	SSE1	P32589	693 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MRPL40	P36534	297 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SHE3	P38272	425 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MNL1	P38888	796 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	POP2	P39008	433 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	UTP18	P40362	594 aa	Predicted RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MAM33	P40513	266 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SEC27	P41811	889 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	CWC22	P53333	577 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MKC7	P53379	596 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	MTQ1	P53944	314 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	PBA1	Q05778	276 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	YTH1	Q06102	208 aa	Predicted RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	RRG8	Q06109	277 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	YLR012C	Q07927	99 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	PRM4	Q12498	284 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SAC3	P46674	1301 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	STE3	P06783	470 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	STE7	P06784	515 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	CLN3	P13365	580 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	CPR1	P14832	162 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	POP5	P28005	173 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	DEP1	P31385	405 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	YHR218W	P38899	603 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	YER186C	P40101	306 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	UTP25	P40498	721 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MRM2	P53123	320 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	LST7	P53237	242 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	ATG38	Q05789	226 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	FAR10	Q06001	478 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SPH1	Q06160	661 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SHS1	Q07657	551 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	TMS1	Q12116	473 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	DCP1	Q12517	231 aa	Predicted RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	OM45	P16547	393 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	HPR1	P17629	752 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	SLY1	P22213	666 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	HXT2	P23585	541 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	MXR2	P25566	168 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SPO23	P33757	523 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	RFS1	P38234	210 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	MEP2	P41948	499 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	CIN2	P46670	268 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	TAF6	P53040	516 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SPR6	Q01684	191 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	SKI8	Q02793	397 aa	Predicted RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	RLP24	Q07915	199 aa	Known RBP	1.3	□□□□□ -2.2
SMC4	YLR086W	PCL9	Q12477	304 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	YOR338W	Q99326	363 aa		1.3	□□□□□ -2.2
SMC4	YLR086W	HEM4	P06174	275 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	ZUO1	P32527	433 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	YBL059W	P34224	193 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	SWC5	P38326	303 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	EFM1	P38732	585 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	PAN6	P40459	309 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	AIM24	P47127	394 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	YGL114W	P53134	725 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	RSA1	Q08932	381 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	OPI3	P05375	206 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	GEP4	P38812	185 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	PRP39	P39682	629 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	HYR1	P40581	163 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	PMT4	P46971	762 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	OKP1	P53298	406 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	HRI1	Q05905	244 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	VAC14	Q06708	880 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	DTD1	Q07648	150 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	SLM3	Q12093	417 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	RGS2	Q99188	309 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	UBA3	Q99344	299 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	TRP1	P00912	224 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	STF1	P01098	86 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	RAD1	P06777	1100 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	RPL5	P26321	297 aa	Known RBP	1.29	□□□□□ -2.2
SMC4	YLR086W	OM14	P38325	134 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	YHR035W	P38769	630 aa		1.29	□□□□□ -2.2
SMC4	YLR086W	NPT1	P39683	429 aa	Known RBP	1.29	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms