RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	YDL144C	Q07589	356 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	PST1	Q12355	444 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	RRP12	Q12754	1228 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	ADH2	P00331	348 aa	Known RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	CDC31	P06704	161 aa	Known RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	RPS16A	P0CX51	143 aa	Known RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	RPS16B	P0CX52	143 aa	Known RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	ATP10	P18496	279 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	CMK2	P22517	447 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	CPR4	P25334	318 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	PRD1	P25375	712 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	PUT3	P25502	979 aa	Predicted RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	CIN8	P27895	1000 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	UTR4	P32626	227 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	MRE11	P32829	692 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	COX14	P39103	70 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	RPA34	P47006	233 aa	Predicted RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	YIP1	P53039	248 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	USE1	P53146	245 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	RNH201	P53942	307 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	YMD8	Q03697	442 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	YET2	Q04210	160 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	UTP15	Q04305	513 aa	Known RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	ESA1	Q08649	445 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	RRG7	Q08774	242 aa	Predicted RBP	0.84	□□□□□ -2.27
PRP16	YKR086W	YDL007C-A	Q2V2Q0	85 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	PDR18	P53756	1333 aa		0.84	□□□□□ -2.27
PRP16	YKR086W	RPP0	P05317	312 aa	Known RBP	0.84	□□□□□ -2.28
PRP16	YKR086W	ATP1	P07251	545 aa	Known RBP	0.84	□□□□□ -2.28
PRP16	YKR086W	SAR1	P20606	190 aa	Known RBP	0.84	□□□□□ -2.28
PRP16	YKR086W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.28	not detected
PRP16	YKR086W	ANP1	P32629	500 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	SKN1	P33336	771 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	YUH1	P35127	236 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	RRN10	P38204	145 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	AST2	P39945	430 aa	Known RBP	0.84	□□□□□ -2.28
PRP16	YKR086W	TRS85	P46944	698 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	MDE1	P47095	244 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	YGL108C	P53139	140 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	ELP3	Q02908	557 aa	Known RBP	0.84	□□□□□ -2.28
PRP16	YKR086W	URH1	Q04179	340 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	YLR413W	Q06689	675 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	YOL075C	Q08234	1294 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	HRT3	Q12347	344 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	CCH1	P50077	2039 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	YPR117W	Q06116	2489 aa		0.84	□□□□□ -2.28
PRP16	YKR086W	PDX1	P16451	410 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	SNF6	P18888	332 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	RVS161	P25343	265 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	RHB1	P25378	209 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	YCR016W	P25617	290 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	DAL80	P26343	269 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	ITR1	P30605	584 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	YBR137W	P38276	179 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	FAU1	P40099	211 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	AIP1	P46680	615 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	YJL016W	P47072	561 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	UPF3	P48412	387 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	YGL242C	P53066	181 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	MKC7	P53379	596 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	FRE4	P53746	719 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	OCA2	P53949	197 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	TRM82	Q03774	444 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	HRI1	Q05905	244 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	HRD1	Q08109	551 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	DNL4	Q08387	944 aa	Predicted RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	TIM18	Q08749	192 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	VAM3	Q12241	283 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	NHP6B	P11633	99 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	NSP1	P14907	823 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	RAD57	P25301	460 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	CHK1	P38147	527 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	DSE1	P40077	573 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	BNA6	P43619	295 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	DLD2	P46681	530 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	AZR1	P50080	613 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	RRN5	Q02983	363 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	YDR114C	Q04597	100 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	PRM6	Q04705	352 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	DON1	Q05610	365 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	SSQ1	Q05931	657 aa	Predicted RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	YPL264C	Q08980	353 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	PIS1	P06197	220 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	SPT15	P13393	240 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	HPR1	P17629	752 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	RPB4	P20433	221 aa	Predicted RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	EPT1	P22140	391 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	GEX1	P25596	615 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	PPA2	P28239	310 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	HEL1	P36113	551 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	MRPL39	P36533	70 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	BMT2	P38278	337 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	SLX1	P38324	304 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	SPT8	P38915	602 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	PET100	P38958	111 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	AIM2	P39721	246 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	RPE1	P46969	238 aa		0.83	□□□□□ -2.28
PRP16	YKR086W	TRF5	P48561	642 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	ASN2	P49090	572 aa	Known RBP	0.83	□□□□□ -2.28
PRP16	YKR086W	RPT4	P53549	437 aa	Known RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms