RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C TRM112P53738 135 aaPredicted RBP2.7□□□□□ -1.98
RPC40YPR110C TDA1Q03533 586 aa2.7□□□□□ -1.98
RPC40YPR110C YDL114WQ07530 308 aa2.7□□□□□ -1.98
RPC40YPR110C CMS1Q07897 291 aaKnown RBP2.7□□□□□ -1.98
RPC40YPR110C PLP2Q12017 286 aa2.7□□□□□ -1.98
RPC40YPR110C JID1Q12350 301 aa2.7□□□□□ -1.98
RPC40YPR110C YCR024C-BQ3E7Z8 88 aa2.7□□□□□ -1.98
RPC40YPR110C MEX67Q99257 599 aaKnown RBP2.7□□□□□ -1.98
RPC40YPR110C FSH3Q99369 266 aa2.7□□□□□ -1.98
RPC40YPR110C NUP170P38181 1502 aa2.69□□□□□ -1.98
RPC40YPR110C ADH2P00331 348 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C RPS16AP0CX51 143 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C RPS16BP0CX52 143 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C ISY1P21374 235 aaPredicted RBP2.69□□□□□ -1.98
RPC40YPR110C TRX1P22217 103 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C DBR1P24309 405 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C ANR2P36090 516 aaPredicted RBP2.69□□□□□ -1.98
RPC40YPR110C YIL089WP40500 205 aa2.69□□□□□ -1.98
RPC40YPR110C SEC27P41811 889 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C CLD1P53264 445 aa2.69□□□□□ -1.98
RPC40YPR110C PRM1P53835 661 aa2.69□□□□□ -1.98
RPC40YPR110C ALF1P53904 254 aa2.69□□□□□ -1.98
RPC40YPR110C PRO2P54885 456 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C RTN1Q04947 295 aaKnown RBP2.69□□□□□ -1.98
RPC40YPR110C RRG7Q08774 242 aaPredicted RBP2.69□□□□□ -1.98
RPC40YPR110C RSA1Q08932 381 aa2.69□□□□□ -1.98
RPC40YPR110C AHC1Q12433 566 aa2.69□□□□□ -1.98
RPC40YPR110C YOR338WQ99326 363 aa2.69□□□□□ -1.98
RPC40YPR110C PDR10P51533 1564 aa2.69□□□□□ -1.98
RPC40YPR110C DOP1Q03921 1698 aa2.69□□□□□ -1.98
RPC40YPR110C MAS1P10507 462 aa2.68□□□□□ -1.98
RPC40YPR110C CLN3P13365 580 aa2.68□□□□□ -1.98
RPC40YPR110C FUN26P31381 517 aa2.68□□□□□ -1.98
RPC40YPR110C SWD3P38123 315 aa2.68□□□□□ -1.98
RPC40YPR110C YHR131CP38835 850 aa2.68□□□□□ -1.98
RPC40YPR110C LIN1P38852 340 aaPredicted RBP2.68□□□□□ -1.98
RPC40YPR110C SNL1P40548 159 aa2.68□□□□□ -1.98
RPC40YPR110C HAC1P41546 238 aa2.68□□□□□ -1.98
RPC40YPR110C HST1P53685 503 aa2.68□□□□□ -1.98
RPC40YPR110C AIM33Q04516 312 aa2.68□□□□□ -1.98
RPC40YPR110C YMR310CQ04867 317 aaPredicted RBP2.68□□□□□ -1.98
RPC40YPR110C RIF2Q06208 395 aa2.68□□□□□ -1.98
RPC40YPR110C YPR091CQ06833 770 aa2.68□□□□□ -1.98
RPC40YPR110C GAT3Q07928 141 aa2.68□□□□□ -1.98
RPC40YPR110C REX3Q12090 404 aa2.68□□□□□ -1.98
RPC40YPR110C FCY22Q12119 530 aa2.68□□□□□ -1.98
RPC40YPR110C HRT3Q12347 344 aa2.68□□□□□ -1.98
RPC40YPR110C YOR012WQ12351 137 aa2.68□□□□□ -1.98
RPC40YPR110C IZH2Q12442 317 aa2.68□□□□□ -1.98
RPC40YPR110C ARO1P08566 1588 aaKnown RBP2.68□□□□□ -1.98
RPC40YPR110C CHC1P22137 1653 aaKnown RBP2.68□□□□□ -1.98
RPC40YPR110C CAT8P39113 1433 aa2.68□□□□□ -1.98
RPC40YPR110C BNI1P41832 1953 aa2.67□□□□□ -1.98
RPC40YPR110C IQG1Q12280 1495 aa2.67□□□□□ -1.98
RPC40YPR110C CKI1P20485 582 aa2.67□□□□□ -1.98
RPC40YPR110C FAR1P21268 830 aa2.67□□□□□ -1.98
RPC40YPR110C PRR1P28708 518 aa2.67□□□□□ -1.98
RPC40YPR110C SRB2P34162 210 aa2.67□□□□□ -1.98
RPC40YPR110C PTK1P36002 662 aaPredicted RBP2.67□□□□□ -1.98
RPC40YPR110C PTI1P39927 425 aaPredicted RBP2.67□□□□□ -1.98
RPC40YPR110C YMR134WP40207 237 aa2.67□□□□□ -1.98
RPC40YPR110C SEC9P40357 651 aa2.67□□□□□ -1.98
RPC40YPR110C KEG1P43614 200 aa2.67□□□□□ -1.98
RPC40YPR110C YFR057WP43625 151 aa2.67□□□□□ -1.98
RPC40YPR110C YHC3P47040 408 aa2.67□□□□□ -1.98
RPC40YPR110C BNS1P50084 137 aa2.67□□□□□ -1.98
RPC40YPR110C SHS1Q07657 551 aa2.67□□□□□ -1.98
RPC40YPR110C PCL9Q12477 304 aa2.67□□□□□ -1.98
RPC40YPR110C HTZ1Q12692 134 aaKnown RBP2.67□□□□□ -1.98
RPC40YPR110C BUD3P25558 1636 aa2.67□□□□□ -1.98
RPC40YPR110C DRS2P39524 1355 aa2.66□□□□□ -1.98
RPC40YPR110C NUP157P40064 1391 aaKnown RBP2.66□□□□□ -1.98
RPC40YPR110C NAM2P11325 894 aa2.66□□□□□ -1.98
RPC40YPR110C SSE1P32589 693 aaKnown RBP2.66□□□□□ -1.98
RPC40YPR110C SPO23P33757 523 aa2.66□□□□□ -1.98
RPC40YPR110C PEX32P38292 413 aa2.66□□□□□ -1.98
RPC40YPR110C POP2P39008 433 aa2.66□□□□□ -1.98
RPC40YPR110C ATG18P43601 500 aa2.66□□□□□ -1.98
RPC40YPR110C ADA2Q02336 434 aa2.66□□□□□ -1.98
RPC40YPR110C YDL199CQ12407 687 aa2.66□□□□□ -1.98
RPC40YPR110C HXT2P23585 541 aa2.65□□□□□ -1.99
RPC40YPR110C RVS161P25343 265 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C HXT1P32465 570 aa2.65□□□□□ -1.99
RPC40YPR110C YEL045CP32616 141 aa2.65□□□□□ -1.99
RPC40YPR110C SUR1P33300 382 aa2.65□□□□□ -1.99
RPC40YPR110C MRPS5P33759 307 aa2.65□□□□□ -1.99
RPC40YPR110C LSM12P38828 187 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C AIM10P39965 576 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C GAB1P41733 394 aa2.65□□□□□ -1.99
RPC40YPR110C CIN2P46670 268 aa2.65□□□□□ -1.99
RPC40YPR110C AIP1P46680 615 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C VPS20Q04272 221 aa2.65□□□□□ -1.99
RPC40YPR110C YMR027WQ04371 470 aa2.65□□□□□ -1.99
RPC40YPR110C MFG1Q07684 458 aa2.65□□□□□ -1.99
RPC40YPR110C RBD2Q12270 262 aa2.65□□□□□ -1.99
RPC40YPR110C WTM1Q12363 437 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C TRM3Q07527 1436 aa2.65□□□□□ -1.99
RPC40YPR110C IKI3Q06706 1349 aaKnown RBP2.65□□□□□ -1.99
RPC40YPR110C DNF2Q12675 1612 aa2.64□□□□□ -1.99
RPC40YPR110C STF1P01098 86 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 152.1 ms