RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	YKU80	Q04437	629 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	GPI11	Q06636	219 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	PFK27	Q12471	397 aa	Predicted RBP	4.58	□□□□□ -1.68
CUE5	YOR042W	SEC39	Q12745	709 aa		4.58	□□□□□ -1.68
CUE5	YOR042W	PUT2	P07275	575 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	MER1	P16523	270 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	MXR2	P25566	168 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	ARP2	P32381	391 aa	Known RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	MKK1	P32490	508 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	AST1	P35183	429 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	RIB1	P38066	345 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	UME6	P39001	836 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	YNL195C	P40168	261 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	SPG5	P42933	373 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	ELP2	P42935	788 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	TRM9	P49957	279 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	HOS2	P53096	452 aa	Predicted RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	SKI8	Q02793	397 aa	Predicted RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	YMR310C	Q04867	317 aa	Predicted RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	ATG38	Q05789	226 aa	Known RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	THP1	Q08231	455 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	PSY3	Q12318	242 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	WTM1	Q12363	437 aa	Known RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	YDL199C	Q12407	687 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	RPS21B	Q3E754	87 aa	Known RBP	4.57	□□□□□ -1.68
CUE5	YOR042W	YKL033W-A	Q86ZR7	236 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	YOR019W	Q99248	730 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	TEL1	P38110	2787 aa		4.57	□□□□□ -1.68
CUE5	YOR042W	ZWF1	P11412	505 aa	Known RBP	4.56	□□□□□ -1.68
CUE5	YOR042W	RPB5	P20434	215 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	CLB3	P24870	427 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	DMC1	P25453	334 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	YJU2	P28320	278 aa	Predicted RBP	4.56	□□□□□ -1.68
CUE5	YOR042W	TUL1	P36096	758 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	ZTA1	P38230	334 aa	Known RBP	4.56	□□□□□ -1.68
CUE5	YOR042W	RBG1	P39729	369 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	FMP52	P40008	231 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	GET2	P40056	285 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	YJL068C	P40363	299 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	YIL152W	P40455	235 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	JHD2	P47156	728 aa	Predicted RBP	4.56	□□□□□ -1.68
CUE5	YOR042W	ATP22	P50273	684 aa	Predicted RBP	4.56	□□□□□ -1.68
CUE5	YOR042W	YGR079W	P53249	370 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	YGR266W	P53326	701 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	SPR6	Q01684	191 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	RRT8	Q08219	342 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	BSC1	Q12140	328 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	ACF2	Q12168	779 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	SKS1	Q12505	502 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	YIL046W-A	Q3E7Z4	54 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	MHF2	Q3E829	80 aa		4.56	□□□□□ -1.68
CUE5	YOR042W	TIM9	O74700	87 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	MF(ALPHA)1	P01149	165 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	FRS1	P15624	595 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	RPS1B	P23248	255 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	YIM1	P28625	365 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	NTG1	P31378	399 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	PTR2	P32901	601 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	LHP1	P33399	275 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	MSN2	P33748	704 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	SWH1	P35845	1188 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	RPS27A	P35997	82 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	AUR1	P36107	401 aa	Predicted RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	SLM4	P38247	162 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	RPS27B	P38711	82 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	MTG2	P38860	518 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	SWD1	P39706	426 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	TPA1	P40032	644 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	MPM1	P40364	252 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	SNL1	P40548	159 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	MRK1	P50873	501 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	YNL181W	P53878	407 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	HOT1	Q03213	719 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	RGC1	Q06108	1083 aa	Known RBP	4.55	□□□□□ -1.68
CUE5	YOR042W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
CUE5	YOR042W	DCI1	Q08558	271 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	FDH1	Q08911	376 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	YOR342C	Q12182	319 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	TAF3	Q12297	353 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	YOL159C-A	Q3E769	90 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	IRA1	P18963	3092 aa		4.55	□□□□□ -1.68
CUE5	YOR042W	SUI3	P09064	285 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	SNF4	P12904	322 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	FBA1	P14540	359 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	URA4	P20051	364 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	DBP3	P20447	523 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	CLB4	P24871	460 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	CMK1	P27466	446 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	YPT7	P32939	208 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	WBP1	P33767	430 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	HCS1	P34243	683 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	SPC34	P36131	295 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	TRR2	P38816	342 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	YHR210C	P38893	341 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	AGP3	P43548	558 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	RPS12	P48589	143 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	TIM44	Q01852	431 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	SPO77	Q06134	477 aa		4.54	□□□□□ -1.68
CUE5	YOR042W	DBP9	Q06218	594 aa	Known RBP	4.54	□□□□□ -1.68
CUE5	YOR042W	SWA2	Q06677	668 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms