RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C FSH3Q99369 266 aa4.01□□□□□ -1.77
SPC24YMR117C CBP6P07253 162 aaPredicted RBP4□□□□□ -1.77
SPC24YMR117C WSC4P38739 605 aa4□□□□□ -1.77
SPC24YMR117C SEO1P39709 593 aa4□□□□□ -1.77
SPC24YMR117C FSH2Q05015 223 aa4□□□□□ -1.77
SPC24YMR117C MCH1Q07376 486 aa4□□□□□ -1.77
SPC24YMR117C HIF1Q12373 385 aa4□□□□□ -1.77
SPC24YMR117C SWI3P32591 825 aa3.99□□□□□ -1.77
SPC24YMR117C ANP1P32629 500 aa3.99□□□□□ -1.77
SPC24YMR117C YKR015CP36111 568 aa3.99□□□□□ -1.77
SPC24YMR117C RPA34P47006 233 aaPredicted RBP3.99□□□□□ -1.77
SPC24YMR117C PGU1P47180 361 aa3.99□□□□□ -1.77
SPC24YMR117C UTP6Q02354 440 aaKnown RBP3.99□□□□□ -1.77
SPC24YMR117C AIM33Q04516 312 aa3.99□□□□□ -1.77
SPC24YMR117C YPQ1Q12010 308 aa3.99□□□□□ -1.77
SPC24YMR117C RPL23AP0CX41 137 aaKnown RBP3.98□□□□□ -1.77
SPC24YMR117C RPL23BP0CX42 137 aaKnown RBP3.98□□□□□ -1.77
SPC24YMR117C MAS1P10507 462 aa3.98□□□□□ -1.77
SPC24YMR117C THR4P16120 514 aaKnown RBP3.98□□□□□ -1.77
SPC24YMR117C RDS1P25611 832 aa3.98□□□□□ -1.77
SPC24YMR117C LAS1P36146 502 aaPredicted RBP3.98□□□□□ -1.77
SPC24YMR117C MRPL27P36526 146 aaPredicted RBP3.98□□□□□ -1.77
SPC24YMR117C HEM14P40012 539 aa3.98□□□□□ -1.77
SPC24YMR117C ECM11Q04110 302 aa3.98□□□□□ -1.77
SPC24YMR117C YLR177WQ06251 628 aa3.98□□□□□ -1.77
SPC24YMR117C ATP16Q12165 160 aa3.98□□□□□ -1.77
SPC24YMR117C SFG1Q12507 346 aa3.98□□□□□ -1.77
SPC24YMR117C NBL1Q3E7Y6 73 aa3.98□□□□□ -1.77
SPC24YMR117C HMX1P32339 317 aa3.97□□□□□ -1.77
SPC24YMR117C COS9P36034 407 aa3.97□□□□□ -1.77
SPC24YMR117C PEX22P39718 180 aa3.97□□□□□ -1.77
SPC24YMR117C YJR030CP47101 745 aa3.97□□□□□ -1.77
SPC24YMR117C YMR310CQ04867 317 aaPredicted RBP3.97□□□□□ -1.77
SPC24YMR117C NFI1Q12216 726 aa3.97□□□□□ -1.77
SPC24YMR117C DET1Q99288 334 aaKnown RBP3.97□□□□□ -1.77
SPC24YMR117C UNG1P12887 359 aa3.96□□□□□ -1.78
SPC24YMR117C GRR1P24814 1151 aa3.96□□□□□ -1.78
SPC24YMR117C YGR018CP53211 109 aa3.96□□□□□ -1.78
SPC24YMR117C DBP9Q06218 594 aaKnown RBP3.96□□□□□ -1.78
SPC24YMR117C YOL075CQ08234 1294 aa3.96□□□□□ -1.78
SPC24YMR117C GLE1Q12315 538 aa3.96□□□□□ -1.78
SPC24YMR117C LDB17Q12342 491 aa3.96□□□□□ -1.78
SPC24YMR117C AIM45Q12480 344 aaKnown RBP3.96□□□□□ -1.78
SPC24YMR117C YBL111CQ3E7Y5 667 aa3.96□□□□□ -1.78
SPC24YMR117C UBA3Q99344 299 aa3.96□□□□□ -1.78
SPC24YMR117C SPT7P35177 1332 aa3.95□□□□□ -1.78
SPC24YMR117C ADH1P00330 348 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C RPS16AP0CX51 143 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C RPS16BP0CX52 143 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C ASP3-2P0CX77 362 aa3.95□□□□□ -1.78
SPC24YMR117C ASP3-3P0CX78 362 aa3.95□□□□□ -1.78
SPC24YMR117C ASP3-4P0CX79 362 aa3.95□□□□□ -1.78
SPC24YMR117C ASP3-1P0CZ17 362 aa3.95□□□□□ -1.78
SPC24YMR117C FAR1P21268 830 aa3.95□□□□□ -1.78
SPC24YMR117C MIR1P23641 311 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C VPH1P32563 840 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C TOA1P32773 286 aa3.95□□□□□ -1.78
SPC24YMR117C YPT35P38815 214 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C SEH1P53011 349 aaKnown RBP3.95□□□□□ -1.78
SPC24YMR117C LST7P53237 242 aa3.95□□□□□ -1.78
SPC24YMR117C YNL143CP53908 130 aa3.95□□□□□ -1.78
SPC24YMR117C RNH201P53942 307 aa3.95□□□□□ -1.78
SPC24YMR117C SMP3Q04174 516 aa3.95□□□□□ -1.78
SPC24YMR117C YDR115WQ04598 105 aa3.95□□□□□ -1.78
SPC24YMR117C ECT1P33412 323 aa3.94□□□□□ -1.78
SPC24YMR117C YBR241CP38142 488 aa3.94□□□□□ -1.78
SPC24YMR117C POT1P27796 417 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SPC24YMR117C PTK1P36002 662 aaPredicted RBP3.93□□□□□ -1.78
SPC24YMR117C RBG1P39729 369 aa3.93□□□□□ -1.78
SPC24YMR117C AIM23P47015 356 aa3.93□□□□□ -1.78
SPC24YMR117C BIO3P50277 480 aa3.93□□□□□ -1.78
SPC24YMR117C AQR1P53943 586 aa3.93□□□□□ -1.78
SPC24YMR117C SLT2Q00772 484 aa3.93□□□□□ -1.78
SPC24YMR117C RPL21AQ02753 160 aaKnown RBP3.93□□□□□ -1.78
SPC24YMR117C GAS2Q06135 555 aa3.93□□□□□ -1.78
SPC24YMR117C YDL012CQ12489 107 aa3.93□□□□□ -1.78
SPC24YMR117C RPL21BQ12672 160 aaKnown RBP3.93□□□□□ -1.78
SPC24YMR117C CKI1P20485 582 aa3.92□□□□□ -1.78
SPC24YMR117C ZUO1P32527 433 aaKnown RBP3.92□□□□□ -1.78
SPC24YMR117C SIF2P38262 535 aa3.92□□□□□ -1.78
SPC24YMR117C APC5Q08683 685 aa3.92□□□□□ -1.78
SPC24YMR117C SRO7Q12038 1033 aa3.92□□□□□ -1.78
SPC24YMR117C YOR012WQ12351 137 aa3.92□□□□□ -1.78
SPC24YMR117C STE3P06783 470 aa3.91□□□□□ -1.78
SPC24YMR117C ARF2P19146 181 aaKnown RBP3.91□□□□□ -1.78
SPC24YMR117C YHR122WP38829 231 aa3.91□□□□□ -1.78
SPC24YMR117C ATG7P38862 630 aa3.91□□□□□ -1.78
SPC24YMR117C CHL4P38907 458 aa3.91□□□□□ -1.78
SPC24YMR117C YFL012WP43580 148 aa3.91□□□□□ -1.78
SPC24YMR117C YHC3P47040 408 aa3.91□□□□□ -1.78
SPC24YMR117C FLC3P53121 802 aa3.91□□□□□ -1.78
SPC24YMR117C CUE3P53137 624 aaKnown RBP3.91□□□□□ -1.78
SPC24YMR117C YGR015CP53208 328 aa3.91□□□□□ -1.78
SPC24YMR117C PRM1P53835 661 aa3.91□□□□□ -1.78
SPC24YMR117C YOR376WQ08900 122 aa3.91□□□□□ -1.78
SPC24YMR117C PMT2P31382 759 aa3.9□□□□□ -1.79
SPC24YMR117C MRPS5P33759 307 aa3.9□□□□□ -1.79
SPC24YMR117C SHE1P38200 338 aa3.9□□□□□ -1.79
SPC24YMR117C SHE3P38272 425 aaKnown RBP3.9□□□□□ -1.79
SPC24YMR117C YNL320WP42840 284 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms