RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	RPB4	P20433	221 aa	Predicted RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	UTR1	P21373	530 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	VPS3	P23643	1011 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	DAL2	P25335	343 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	VMA5	P31412	392 aa	Known RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	MNS1	P32906	549 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	MRPS5	P33759	307 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	BMH2	P34730	273 aa	Known RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	ECM15	P35195	104 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
RNP1	YLL046C	YNK1	P36010	153 aa	Known RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	TAE1	P38340	232 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	MMS21	P38632	267 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	ATG7	P38862	630 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	RTR1	P40084	226 aa	Predicted RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	CDC40	P40968	455 aa	Predicted RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	FMP33	P46998	180 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	NAS6	P50086	228 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	YGR117C	P53270	476 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	SPP2	Q02521	185 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	COX20	Q04935	205 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	ERP1	Q05359	219 aa	Known RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	MRPL51	Q06090	140 aa	Predicted RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	THI20	Q08224	551 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	SAM4	Q08985	325 aa	Known RBP	2.23	□□□□□ -2.05
RNP1	YLL046C	YPQ1	Q12010	308 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	SRL2	Q12020	392 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	NCA2	Q12374	616 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	ARP6	Q12509	438 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	UBA3	Q99344	299 aa		2.23	□□□□□ -2.05
RNP1	YLL046C	SSK22	P25390	1331 aa	Predicted RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
RNP1	YLL046C	POL30	P15873	258 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	SAM2	P19358	384 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	MRPL25	P23369	157 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	YSR3	P23501	404 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	YCR016W	P25617	290 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	POP5	P28005	173 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	CWP1	P28319	239 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	PRR1	P28708	518 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	ITR1	P30605	584 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	EFB1	P32471	206 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	SKG6	P32900	734 aa	Predicted RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
RNP1	YLL046C	YKL071W	P36086	256 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	PET100	P38958	111 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	YMR134W	P40207	237 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	SEC9	P40357	651 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	CSM2	P40465	213 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	SHQ1	P40486	507 aa	Predicted RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	GCN20	P43535	752 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	TIS11	P47977	285 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	YGL082W	P53155	381 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	MNT4	P53745	580 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	GIM3	P53900	129 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	HER2	Q03557	464 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	BNA5	Q05979	453 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	PBP4	Q07362	185 aa	Known RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	SHS1	Q07657	551 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	SGT1	Q08446	395 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	CLP1	Q08685	445 aa	Predicted RBP	2.22	□□□□□ -2.05
RNP1	YLL046C	YOP1	Q12402	180 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	YDL012C	Q12489	107 aa		2.22	□□□□□ -2.05
RNP1	YLL046C	CDC36	P06100	191 aa	Predicted RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	RAD1	P06777	1100 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SSC1	P0CS90	654 aa	Known RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	AMD1	P15274	810 aa	Known RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	RPL5	P26321	297 aa	Known RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	TIP1	P27654	210 aa	Predicted RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	NDC1	P32500	655 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	TOA2	P32774	122 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	VAM7	P32912	316 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SKT5	P34226	696 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	HIS2	P38635	335 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	GEP4	P38812	185 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SBE22	P38814	852 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	FHL1	P39521	936 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	YER085C	P40058	173 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SHO1	P40073	367 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	MSS2	P40990	351 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	IDP2	P41939	412 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	YGR210C	P42942	411 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	GWT1	P47026	490 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	AIM24	P47127	394 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	AZR1	P50080	613 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	AVT4	P50944	713 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	CGR1	P53188	120 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	POP6	P53218	158 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	PXR1	P53335	271 aa	Predicted RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	RRN9	P53437	365 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	YNR048W	P53740	393 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	RVB1	Q03940	463 aa	Known RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	VPS74	Q06385	345 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	GAT3	Q07928	141 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	TIM18	Q08749	192 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	MUM3	Q08750	479 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SLF1	Q12034	447 aa	Known RBP	2.21	□□□□□ -2.06
RNP1	YLL046C	YDL009C	Q12210	107 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	SIA1	Q12212	622 aa		2.21	□□□□□ -2.06
RNP1	YLL046C	YOR029W	Q12243	111 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms