RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	HXT2	P23585	541 aa		4.16	□□□□□ -1.74
RTN1	YDR233C	YIL089W	P40500	205 aa		4.16	□□□□□ -1.74
RTN1	YDR233C	TRF5	P48561	642 aa	Known RBP	4.16	□□□□□ -1.74
RTN1	YDR233C	MRPS5	P33759	307 aa		4.15	□□□□□ -1.75
RTN1	YDR233C	OM14	P38325	134 aa		4.15	□□□□□ -1.75
RTN1	YDR233C	LIN1	P38852	340 aa	Predicted RBP	4.15	□□□□□ -1.75
RTN1	YDR233C	YHC3	P47040	408 aa		4.15	□□□□□ -1.75
RTN1	YDR233C	LST7	P53237	242 aa		4.15	□□□□□ -1.75
RTN1	YDR233C	RRB1	Q04225	511 aa	Known RBP	4.15	□□□□□ -1.75
RTN1	YDR233C	LIP2	Q06005	328 aa		4.15	□□□□□ -1.75
RTN1	YDR233C	TRX1	P22217	103 aa	Known RBP	4.14	□□□□□ -1.75
RTN1	YDR233C	PCL1	P24867	279 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	MXR2	P25566	168 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	CDC50	P25656	391 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	TIM17	P39515	158 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	HST1	P53685	503 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	PRO2	P54885	456 aa	Known RBP	4.14	□□□□□ -1.75
RTN1	YDR233C	NAT4	Q04751	285 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	YOL075C	Q08234	1294 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	YDL109C	Q12103	647 aa		4.14	□□□□□ -1.75
RTN1	YDR233C	PRB1	P09232	635 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	RPL16A	P26784	199 aa	Known RBP	4.13	□□□□□ -1.75
RTN1	YDR233C	IST2	P38250	946 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	PFS1	P38872	237 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	ALP1	P38971	573 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	PGU1	P47180	361 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	YGL039W	P53183	348 aa	Known RBP	4.13	□□□□□ -1.75
RTN1	YDR233C	VAC7	P53950	1165 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	ARR1	Q06596	294 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	SLM3	Q12093	417 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	GLE1	Q12315	538 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	SPO24	Q3E752	67 aa		4.13	□□□□□ -1.75
RTN1	YDR233C	HEM4	P06174	275 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	UTR1	P21373	530 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	YPT35	P38815	214 aa	Known RBP	4.12	□□□□□ -1.75
RTN1	YDR233C	LSM12	P38828	187 aa	Known RBP	4.12	□□□□□ -1.75
RTN1	YDR233C	YHR182W	P38870	785 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	ALD5	P40047	520 aa	Known RBP	4.12	□□□□□ -1.75
RTN1	YDR233C	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	YJR030C	P47101	745 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	ADD37	Q03233	198 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	MSC3	Q05812	728 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	SPH1	Q06160	661 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	REX3	Q12090	404 aa		4.12	□□□□□ -1.75
RTN1	YDR233C	RAD1	P06777	1100 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	RPL23A	P0CX41	137 aa	Known RBP	4.11	□□□□□ -1.75
RTN1	YDR233C	RPL23B	P0CX42	137 aa	Known RBP	4.11	□□□□□ -1.75
RTN1	YDR233C	GIT1	P25346	518 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	YMR134W	P40207	237 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	YCH1	P42937	148 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	AIP1	P46680	615 aa	Known RBP	4.11	□□□□□ -1.75
RTN1	YDR233C	PRP38	Q00723	242 aa	Predicted RBP	4.11	□□□□□ -1.75
RTN1	YDR233C	HAL1	Q01766	294 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	CSM3	Q04659	317 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	STE23	Q06010	1027 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	APC5	Q08683	685 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	ATP16	Q12165	160 aa		4.11	□□□□□ -1.75
RTN1	YDR233C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RTN1	YDR233C	ZRC1	P20107	442 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	SRB2	P34162	210 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	UTH1	P36135	365 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	PEX32	P38292	413 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	POP2	P39008	433 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	PRP39	P39682	629 aa	Known RBP	4.1	□□□□□ -1.75
RTN1	YDR233C	SEH1	P53011	349 aa	Known RBP	4.1	□□□□□ -1.75
RTN1	YDR233C	ENT5	Q03769	411 aa	Known RBP	4.1	□□□□□ -1.75
RTN1	YDR233C	YOR376W	Q08900	122 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	SFM1	Q12314	213 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	UBA3	Q99344	299 aa		4.1	□□□□□ -1.75
RTN1	YDR233C	SOD1	P00445	154 aa	Known RBP	4.09	□□□□□ -1.75
RTN1	YDR233C	RPS14A	P06367	137 aa	Known RBP	4.09	□□□□□ -1.75
RTN1	YDR233C	CIN8	P27895	1000 aa		4.09	□□□□□ -1.75
RTN1	YDR233C	PMT2	P31382	759 aa		4.09	□□□□□ -1.75
RTN1	YDR233C	YKR015C	P36111	568 aa		4.09	□□□□□ -1.75
RTN1	YDR233C	RPS14B	P39516	138 aa	Known RBP	4.09	□□□□□ -1.75
RTN1	YDR233C	COX4	P04037	155 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	YLL053C	P0CD98	152 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	ARF2	P19146	181 aa	Known RBP	4.08	□□□□□ -1.76
RTN1	YDR233C	CMK2	P22517	447 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	MIR1	P23641	311 aa	Known RBP	4.08	□□□□□ -1.76
RTN1	YDR233C	MKK1	P32490	508 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	RBG1	P39729	369 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	YGL114W	P53134	725 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	LSG1	P53145	640 aa	Known RBP	4.08	□□□□□ -1.76
RTN1	YDR233C	DNL4	Q08387	944 aa	Predicted RBP	4.08	□□□□□ -1.76
RTN1	YDR233C	FRE8	Q12209	686 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	HMS1	Q12398	434 aa		4.08	□□□□□ -1.76
RTN1	YDR233C	DEP1	P31385	405 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	IES6	P32617	166 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	SUR1	P33300	382 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	RCK2	P38623	610 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	IGD1	P43598	195 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	YNL146W	P53906	100 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	YMR010W	Q03687	405 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	TRM82	Q03774	444 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	MGR3	Q04472	501 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	FSH2	Q05015	223 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	YLR177W	Q06251	628 aa		4.07	□□□□□ -1.76
RTN1	YDR233C	RNR2	P09938	399 aa	Known RBP	4.06	□□□□□ -1.76
RTN1	YDR233C	UNG1	P12887	359 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms