RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W SHP1P34223 423 aa3.8□□□□□ -1.8
VMA1YDL185W MRP21P38175 177 aa3.8□□□□□ -1.8
VMA1YDL185W VID24P38263 362 aa3.8□□□□□ -1.8
VMA1YDL185W AIM46P38885 310 aa3.8□□□□□ -1.8
VMA1YDL185W LAS21P40367 830 aa3.8□□□□□ -1.8
VMA1YDL185W PKP1P40530 394 aa3.8□□□□□ -1.8
VMA1YDL185W TAX4P47030 604 aa3.8□□□□□ -1.8
VMA1YDL185W YNR062CP53748 327 aa3.8□□□□□ -1.8
VMA1YDL185W MZM1Q03429 123 aaPredicted RBP3.8□□□□□ -1.8
VMA1YDL185W ANT1Q06497 328 aa3.8□□□□□ -1.8
VMA1YDL185W GUD1Q07729 489 aa3.8□□□□□ -1.8
VMA1YDL185W UNG1P12887 359 aa3.8□□□□□ -1.8
VMA1YDL185W HAP4P14064 554 aa3.8□□□□□ -1.8
VMA1YDL185W TFS1P14306 219 aa3.8□□□□□ -1.8
VMA1YDL185W APE1P14904 514 aa3.8□□□□□ -1.8
VMA1YDL185W MRPL36P36531 177 aa3.8□□□□□ -1.8
VMA1YDL185W SCO2P38072 301 aa3.8□□□□□ -1.8
VMA1YDL185W YBR013CP38215 129 aa3.8□□□□□ -1.8
VMA1YDL185W TCM62P38228 572 aaKnown RBP3.8□□□□□ -1.8
VMA1YDL185W YEL028WP39989 153 aa3.8□□□□□ -1.8
VMA1YDL185W LSM4P40070 187 aaKnown RBP3.8□□□□□ -1.8
VMA1YDL185W PAM16P42949 149 aa3.8□□□□□ -1.8
VMA1YDL185W RPS10BP46784 105 aaKnown RBP3.8□□□□□ -1.8
VMA1YDL185W MOG1P47123 218 aa3.8□□□□□ -1.8
VMA1YDL185W VPS62P53285 467 aa3.8□□□□□ -1.8
VMA1YDL185W AAT1Q01802 451 aa3.8□□□□□ -1.8
VMA1YDL185W SKY1Q03656 742 aa3.8□□□□□ -1.8
VMA1YDL185W VBA1Q04301 562 aa3.8□□□□□ -1.8
VMA1YDL185W SMA2Q04658 369 aa3.8□□□□□ -1.8
VMA1YDL185W GAS2Q06135 555 aa3.8□□□□□ -1.8
VMA1YDL185W ECM7Q06200 448 aa3.8□□□□□ -1.8
VMA1YDL185W NUT2Q06213 157 aa3.8□□□□□ -1.8
VMA1YDL185W GRC3Q07845 632 aa3.8□□□□□ -1.8
VMA1YDL185W RPS10AQ08745 105 aaPredicted RBP3.8□□□□□ -1.8
VMA1YDL185W NUS1Q12063 375 aa3.8□□□□□ -1.8
VMA1YDL185W ZPS1Q12512 249 aa3.8□□□□□ -1.8
VMA1YDL185W CTF3Q12748 733 aa3.8□□□□□ -1.8
VMA1YDL185W FAA1P30624 700 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W CYS3P31373 394 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W ORC2P32833 620 aa3.79□□□□□ -1.8
VMA1YDL185W SRP102P36057 244 aaPredicted RBP3.79□□□□□ -1.8
VMA1YDL185W AGP2P38090 596 aa3.79□□□□□ -1.8
VMA1YDL185W ALG14P38242 237 aa3.79□□□□□ -1.8
VMA1YDL185W MMS4P38257 691 aa3.79□□□□□ -1.8
VMA1YDL185W NEM1P38757 446 aa3.79□□□□□ -1.8
VMA1YDL185W PZF1P39933 429 aa3.79□□□□□ -1.8
VMA1YDL185W TIS11P47977 285 aa3.79□□□□□ -1.8
VMA1YDL185W PHO23P50947 330 aa3.79□□□□□ -1.8
VMA1YDL185W COS10P52924 374 aa3.79□□□□□ -1.8
VMA1YDL185W MTC3P53077 123 aa3.79□□□□□ -1.8
VMA1YDL185W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
VMA1YDL185W SPP2Q02521 185 aa3.79□□□□□ -1.8
VMA1YDL185W RLI1Q03195 608 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W JIP4Q03361 876 aa3.79□□□□□ -1.8
VMA1YDL185W ARA2Q04212 335 aa3.79□□□□□ -1.8
VMA1YDL185W SEN15Q04675 128 aa3.79□□□□□ -1.8
VMA1YDL185W CDD1Q06549 142 aa3.79□□□□□ -1.8
VMA1YDL185W GIC2Q06648 383 aa3.79□□□□□ -1.8
VMA1YDL185W YPR084WQ06821 456 aa3.79□□□□□ -1.8
VMA1YDL185W THI73Q07904 523 aa3.79□□□□□ -1.8
VMA1YDL185W RCL1Q08096 367 aaPredicted RBP3.79□□□□□ -1.8
VMA1YDL185W BSC1Q12140 328 aa3.79□□□□□ -1.8
VMA1YDL185W SFM1Q12314 213 aa3.79□□□□□ -1.8
VMA1YDL185W YOL114CQ12322 202 aa3.79□□□□□ -1.8
VMA1YDL185W AI1P03875 834 aa3.79□□□□□ -1.8
VMA1YDL185W SCEIP03882 235 aa3.79□□□□□ -1.8
VMA1YDL185W ERD2P18414 219 aa3.79□□□□□ -1.8
VMA1YDL185W YCR099CP25657 155 aa3.79□□□□□ -1.8
VMA1YDL185W PRE4P30657 266 aa3.79□□□□□ -1.8
VMA1YDL185W ECM25P32525 599 aa3.79□□□□□ -1.8
VMA1YDL185W IXR1P33417 597 aa3.79□□□□□ -1.8
VMA1YDL185W YNK1P36010 153 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W ATG8P38182 117 aaRIP-Chip data3.79□□□□□ -1.8not detected
VMA1YDL185W ALP1P38971 573 aa3.79□□□□□ -1.8
VMA1YDL185W LSM5P40089 93 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W RFC4P40339 323 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W MEP2P41948 499 aa3.79□□□□□ -1.8
VMA1YDL185W PFA3P42836 336 aa3.79□□□□□ -1.8
VMA1YDL185W SDT1P53078 280 aa3.79□□□□□ -1.8
VMA1YDL185W PKP2P53170 491 aa3.79□□□□□ -1.8
VMA1YDL185W SWC4P53201 476 aa3.79□□□□□ -1.8
VMA1YDL185W PBP1P53297 722 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W MET14Q02196 202 aa3.79□□□□□ -1.8
VMA1YDL185W YMR265CQ03508 461 aaKnown RBP3.79□□□□□ -1.8
VMA1YDL185W CIA1Q05583 330 aa3.79□□□□□ -1.8
VMA1YDL185W SPC3Q12133 184 aa3.79□□□□□ -1.8
VMA1YDL185W SFG1Q12507 346 aa3.79□□□□□ -1.8
VMA1YDL185W YBL029C-AQ3E756 94 aa3.79□□□□□ -1.8
VMA1YDL185W TOM1Q03280 3268 aa3.79□□□□□ -1.8
VMA1YDL185W MRPL44P19956 98 aa3.78□□□□□ -1.8
VMA1YDL185W SEC22P22214 214 aa3.78□□□□□ -1.8
VMA1YDL185W STE50P25344 346 aa3.78□□□□□ -1.8
VMA1YDL185W MRP20P32387 263 aa3.78□□□□□ -1.8
VMA1YDL185W TMA19P35691 167 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W SOL2P37262 315 aa3.78□□□□□ -1.8
VMA1YDL185W AIM3P38266 947 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W HTD2P38790 280 aaKnown RBP3.78□□□□□ -1.8
VMA1YDL185W YHR122WP38829 231 aa3.78□□□□□ -1.8
VMA1YDL185W EAF5P39995 279 aa3.78□□□□□ -1.8
VMA1YDL185W ELO3P40319 345 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 171.8 ms