RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	RBS1	Q05672	457 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	MRPL35	Q06678	367 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	ATG41	Q12048	136 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TY2A-B	Q12260	438 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TY2A-OR2	Q12293	438 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	YOL114C	Q12322	202 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	MMP1	Q12372	583 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TY2A-DR1	Q12392	438 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TY2A-OR1	Q12439	438 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TY2A-DR3	Q99303	438 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	DSF1	P0CX08	502 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	YNR073C	P0CX09	502 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	DBP2	P24783	546 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	RFA2	P26754	273 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	FUN26	P31381	517 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	SCO2	P38072	301 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	GIM4	P40005	111 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	PKP1	P40530	394 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TOS2	P50078	622 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	PPT1	P53043	513 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	SDT1	P53078	280 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	ROG1	P53118	685 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	PGA1	P53896	198 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	ERV25	P54837	211 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	MRPS16	Q02608	121 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	SCS7	Q03529	384 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	TDA1	Q03533	586 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	ATG38	Q05789	226 aa	Known RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	UTP21	Q06078	939 aa	Predicted RBP	3.99	□□□□□ -1.77
RPG1	YBR079C	FEX1	Q08913	375 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	YPR022C	Q12139	1133 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	YOR214C	Q12282	236 aa		3.99	□□□□□ -1.77
RPG1	YBR079C	CDC9	P04819	755 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	RED1	P14291	827 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	YCR100C	P25606	316 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	MSS1	P32559	526 aa	Predicted RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	PXA2	P34230	853 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	SDS22	P36047	338 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
RPG1	YBR079C	MNN2	P38069	597 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	IML3	P38265	245 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	RRF1	P38771	230 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	PLB1	P39105	664 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	CIN1	P40987	1014 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	YJL049W	P47048	450 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	IBA57	P47158	497 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	CTL1	Q03220	320 aa	Known RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	BOP2	Q06150	570 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	REX4	Q08237	289 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	FEX2	Q08991	375 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	PCL9	Q12477	304 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	YOS9	Q99220	542 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	SRY1	P36007	326 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	HEM14	P40012	539 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	RFC4	P40339	323 aa	Known RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	ALB1	P47019	175 aa	Predicted RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	NUP57	P48837	541 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	FOL2	P51601	243 aa	Known RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	YPL068C	Q02749	293 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	EAR1	Q03212	550 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	YLR283W	Q05867	314 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	MLC2	Q06580	163 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	SYC1	Q08553	188 aa	Predicted RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	FRE3	Q08905	711 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	YDL176W	Q12027	708 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	RDI1	Q12434	202 aa		3.98	□□□□□ -1.77
RPG1	YBR079C	PNO1	Q99216	274 aa	Known RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	SLH1	P53327	1967 aa	Known RBP	3.98	□□□□□ -1.77
RPG1	YBR079C	SOD2	P00447	233 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	RPS17A	P02407	136 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	GCN4	P03069	281 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	RPS17B	P14127	136 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	CKS1	P20486	150 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	RPA135	P22138	1203 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	PRP28	P23394	588 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	CTS1	P29029	562 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	ACB1	P31787	87 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	VMA8	P32610	256 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	SUR1	P33300	382 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	KKQ8	P36004	724 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	BNA4	P38169	460 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	RRN10	P38204	145 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	TAE1	P38340	232 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	MSS4	P38994	779 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	RAD17	P48581	401 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	FMP48	P53233	369 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	MNT4	P53745	580 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	YPL014W	Q02606	381 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	VBA1	Q04301	562 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	YDR344C	Q05510	147 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	ATG10	Q07879	167 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	RRP40	Q08285	240 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	YBR085C-A	O43137	85 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	MOD5	P07884	428 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	ERD2	P18414	219 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	PHO80	P20052	293 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	YSR3	P23501	404 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	EXG1	P23776	448 aa	Known RBP	3.97	□□□□□ -1.77
RPG1	YBR079C	AHC2	P25649	128 aa		3.97	□□□□□ -1.77
RPG1	YBR079C	YJU3	P28321	313 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms