RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A TIR2P33890 251 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A LTV1P34078 463 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A GEP4P38812 185 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A HEM14P40012 539 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A SEC9P40357 651 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A ABM1P47146 123 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A REX2P54964 269 aaKnown RBP2.17□□□□□ -2.06
YOR343W-AYOR343W-A ECM7Q06200 448 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A MCT1Q12283 360 aa2.17□□□□□ -2.06
YOR343W-AYOR343W-A PDE2P06776 526 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A ARF1P11076 181 aaKnown RBP2.16□□□□□ -2.06
YOR343W-AYOR343W-A CHA1P25379 360 aaKnown RBP2.16□□□□□ -2.06
YOR343W-AYOR343W-A TOA2P32774 122 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A DOA1P36037 715 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A SOL2P37262 315 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A LSM12P38828 187 aaKnown RBP2.16□□□□□ -2.06
YOR343W-AYOR343W-A PAC11P40960 533 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A KEG1P43614 200 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A URC2Q04411 772 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A DCI1Q08558 271 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A YPS3Q12303 508 aa2.16□□□□□ -2.06
YOR343W-AYOR343W-A WSC4P38739 605 aa2.15□□□□□ -2.07
YOR343W-AYOR343W-A PFS2P42841 465 aaKnown RBP2.15□□□□□ -2.07
YOR343W-AYOR343W-A VAC7P53950 1165 aa2.15□□□□□ -2.07
YOR343W-AYOR343W-A PRP38Q00723 242 aaPredicted RBP2.15□□□□□ -2.07
YOR343W-AYOR343W-A MSC3Q05812 728 aa2.15□□□□□ -2.07
YOR343W-AYOR343W-A RFM1Q12192 310 aa2.15□□□□□ -2.07
YOR343W-AYOR343W-A HMS1Q12398 434 aa2.15□□□□□ -2.07
YOR343W-AYOR343W-A MEX67Q99257 599 aaKnown RBP2.15□□□□□ -2.07
YOR343W-AYOR343W-A MAS2P11914 482 aa2.14□□□□□ -2.07
YOR343W-AYOR343W-A SEH1P53011 349 aaKnown RBP2.14□□□□□ -2.07
YOR343W-AYOR343W-A RPL21AQ02753 160 aaKnown RBP2.14□□□□□ -2.07
YOR343W-AYOR343W-A YDR541CQ03049 344 aa2.14□□□□□ -2.07
YOR343W-AYOR343W-A YOR376WQ08900 122 aa2.14□□□□□ -2.07
YOR343W-AYOR343W-A SLF1Q12034 447 aaKnown RBP2.14□□□□□ -2.07
YOR343W-AYOR343W-A TIR4Q12218 487 aaPredicted RBP2.14□□□□□ -2.07
YOR343W-AYOR343W-A SFM1Q12314 213 aa2.14□□□□□ -2.07
YOR343W-AYOR343W-A GPM3Q12326 303 aa2.14□□□□□ -2.07
YOR343W-AYOR343W-A RPL21BQ12672 160 aaKnown RBP2.14□□□□□ -2.07
YOR343W-AYOR343W-A TPI1P00942 248 aaKnown RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A RPS19AP07280 144 aaKnown RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A RPS19BP07281 144 aaPredicted RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A RPS18AP0CX55 146 aaKnown RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A RPS18BP0CX56 146 aaPredicted RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A ANP1P32629 500 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A TOA1P32773 286 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A PEX22P39718 180 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A MEH1Q02205 184 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A YDR115WQ04598 105 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A YLR177WQ06251 628 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A NDL1Q06568 189 aa2.13□□□□□ -2.07
YOR343W-AYOR343W-A NOP6Q07623 225 aaKnown RBP2.13□□□□□ -2.07
YOR343W-AYOR343W-A RNA1P11745 407 aaKnown RBP2.12□□□□□ -2.07
YOR343W-AYOR343W-A TPS2P31688 896 aaKnown RBP2.12□□□□□ -2.07
YOR343W-AYOR343W-A PDC2P32896 925 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A FHL1P39521 936 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A SEC27P41811 889 aaKnown RBP2.12□□□□□ -2.07
YOR343W-AYOR343W-A CIN2P46670 268 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A RTT102P53330 157 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A ERO1Q03103 563 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A LDS2Q08218 356 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A AAD15Q08361 143 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A YDR061WQ12298 539 aa2.12□□□□□ -2.07
YOR343W-AYOR343W-A ASP3-2P0CX77 362 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A ASP3-3P0CX78 362 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A ASP3-4P0CX79 362 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A ASP3-1P0CZ17 362 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A SRP72P38688 640 aaKnown RBP2.11□□□□□ -2.07
YOR343W-AYOR343W-A WSS1P38838 269 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A CTK3P46963 296 aaPredicted RBP2.11□□□□□ -2.07
YOR343W-AYOR343W-A BIO3P50277 480 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A YMR010WQ03687 405 aa2.11□□□□□ -2.07
YOR343W-AYOR343W-A RPL16AP26784 199 aaKnown RBP2.1□□□□□ -2.07
YOR343W-AYOR343W-A MSP1P28737 362 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A MNL1P38888 796 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A YGR067CP53243 804 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A SRO7Q12038 1033 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A ATP16Q12165 160 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A HIF1Q12373 385 aa2.1□□□□□ -2.07
YOR343W-AYOR343W-A UNG1P12887 359 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A FMT1P32785 401 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A ECM34P38728 170 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A FRT2P39734 528 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A ASN2P49090 572 aaKnown RBP2.09□□□□□ -2.08
YOR343W-AYOR343W-A VEL1P53058 206 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A RNH201P53942 307 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A CIK1Q01649 594 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A GYL1Q04322 720 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A FSH2Q05015 223 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A GAT3Q07928 141 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A SPE3Q12074 293 aaKnown RBP2.09□□□□□ -2.08
YOR343W-AYOR343W-A YDL109CQ12103 647 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A YOL085CQ99345 113 aa2.09□□□□□ -2.08
YOR343W-AYOR343W-A HEM4P06174 275 aa2.08□□□□□ -2.08
YOR343W-AYOR343W-A LDS1P31379 325 aa2.08□□□□□ -2.08
YOR343W-AYOR343W-A SMP1P38128 452 aa2.08□□□□□ -2.08
YOR343W-AYOR343W-A YBR241CP38142 488 aa2.08□□□□□ -2.08
YOR343W-AYOR343W-A KAP104P38217 918 aaKnown RBP2.08□□□□□ -2.08
YOR343W-AYOR343W-A SPP381P38282 291 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-AYOR343W-A YHR177WP38867 453 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms