RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W CMK2P22517 447 aa1.98□□□□□ -2.09
CTK3YML112W SWE1P32944 819 aa1.98□□□□□ -2.09
CTK3YML112W GEP4P38812 185 aa1.98□□□□□ -2.09
CTK3YML112W FAD1P38913 306 aa1.98□□□□□ -2.09
CTK3YML112W PAC11P40960 533 aa1.98□□□□□ -2.09
CTK3YML112W HST1P53685 503 aa1.98□□□□□ -2.09
CTK3YML112W REX2P54964 269 aaKnown RBP1.98□□□□□ -2.09
CTK3YML112W PRP3Q03338 469 aaPredicted RBP1.98□□□□□ -2.09
CTK3YML112W RFM1Q12192 310 aa1.98□□□□□ -2.09
CTK3YML112W PUT4P15380 627 aa1.97□□□□□ -2.09
CTK3YML112W RPC53P25441 422 aa1.97□□□□□ -2.09
CTK3YML112W NRP1P32770 719 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
CTK3YML112W TIR2P33890 251 aa1.97□□□□□ -2.09
CTK3YML112W LTV1P34078 463 aa1.97□□□□□ -2.09
CTK3YML112W CHL4P38907 458 aa1.97□□□□□ -2.09
CTK3YML112W TCB2P48231 1178 aa1.97□□□□□ -2.09
CTK3YML112W TOS2P50078 622 aa1.97□□□□□ -2.09
CTK3YML112W ENT5Q03769 411 aaKnown RBP1.97□□□□□ -2.09
CTK3YML112W YDR341CQ05506 607 aaKnown RBP1.97□□□□□ -2.09
CTK3YML112W YHC1Q05900 231 aaKnown RBP1.97□□□□□ -2.09
CTK3YML112W MCT1Q12283 360 aa1.97□□□□□ -2.09
CTK3YML112W OPI3P05375 206 aa1.96□□□□□ -2.1
CTK3YML112W RPS18AP0CX55 146 aaKnown RBP1.96□□□□□ -2.1
CTK3YML112W RPS18BP0CX56 146 aaPredicted RBP1.96□□□□□ -2.1
CTK3YML112W ZIP1P31111 875 aa1.96□□□□□ -2.1
CTK3YML112W LDS1P31379 325 aa1.96□□□□□ -2.1
CTK3YML112W SPO23P33757 523 aa1.96□□□□□ -2.1
CTK3YML112W COS9P36034 407 aa1.96□□□□□ -2.1
CTK3YML112W ECM34P38728 170 aa1.96□□□□□ -2.1
CTK3YML112W KEG1P43614 200 aa1.96□□□□□ -2.1
CTK3YML112W SEH1P53011 349 aaKnown RBP1.96□□□□□ -2.1
CTK3YML112W ROG1P53118 685 aa1.96□□□□□ -2.1
CTK3YML112W RRN9P53437 365 aa1.96□□□□□ -2.1
CTK3YML112W IGO1P53897 168 aa1.96□□□□□ -2.1
CTK3YML112W MSC3Q05812 728 aa1.96□□□□□ -2.1
CTK3YML112W YLR456WQ06199 204 aa1.96□□□□□ -2.1
CTK3YML112W ECM7Q06200 448 aa1.96□□□□□ -2.1
CTK3YML112W AAD15Q08361 143 aa1.96□□□□□ -2.1
CTK3YML112W RNH203Q12338 110 aa1.96□□□□□ -2.1
CTK3YML112W RPL12AP0CX53 165 aaKnown RBP1.95□□□□□ -2.1
CTK3YML112W RPL12BP0CX54 165 aa1.95□□□□□ -2.1
CTK3YML112W PDC2P32896 925 aa1.95□□□□□ -2.1
CTK3YML112W KAP104P38217 918 aaKnown RBP1.95□□□□□ -2.1
CTK3YML112W VEL1P53058 206 aa1.95□□□□□ -2.1
CTK3YML112W YGR067CP53243 804 aa1.95□□□□□ -2.1
CTK3YML112W PRP38Q00723 242 aaPredicted RBP1.95□□□□□ -2.1
CTK3YML112W YDR541CQ03049 344 aa1.95□□□□□ -2.1
CTK3YML112W YLR177WQ06251 628 aa1.95□□□□□ -2.1
CTK3YML112W UAF30Q08747 228 aa1.95□□□□□ -2.1
CTK3YML112W TIR4Q12218 487 aaPredicted RBP1.95□□□□□ -2.1
CTK3YML112W EPT1P22140 391 aa1.94□□□□□ -2.1
CTK3YML112W RPL16AP26784 199 aaKnown RBP1.94□□□□□ -2.1
CTK3YML112W TPS2P31688 896 aaKnown RBP1.94□□□□□ -2.1
CTK3YML112W QDR3P38227 689 aa1.94□□□□□ -2.1
CTK3YML112W YIR035CP40579 254 aa1.94□□□□□ -2.1
CTK3YML112W SEC27P41811 889 aaKnown RBP1.94□□□□□ -2.1
CTK3YML112W BUD27P43573 796 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
CTK3YML112W RNH201P53942 307 aa1.94□□□□□ -2.1
CTK3YML112W CIK1Q01649 594 aa1.94□□□□□ -2.1
CTK3YML112W YDR115WQ04598 105 aa1.94□□□□□ -2.1
CTK3YML112W FSH2Q05015 223 aa1.94□□□□□ -2.1
CTK3YML112W ASA1Q06822 443 aa1.94□□□□□ -2.1
CTK3YML112W MAS2P11914 482 aa1.93□□□□□ -2.1
CTK3YML112W MRPL8P22353 238 aa1.93□□□□□ -2.1
CTK3YML112W IME2P32581 645 aa1.93□□□□□ -2.1
CTK3YML112W TOA2P32774 122 aa1.93□□□□□ -2.1
CTK3YML112W PXA2P34230 853 aa1.93□□□□□ -2.1
CTK3YML112W PRY2P36110 329 aa1.93□□□□□ -2.1
CTK3YML112W SMP1P38128 452 aa1.93□□□□□ -2.1
CTK3YML112W YBR241CP38142 488 aa1.93□□□□□ -2.1
CTK3YML112W SRP72P38688 640 aaKnown RBP1.93□□□□□ -2.1
CTK3YML112W CIN2P46670 268 aa1.93□□□□□ -2.1
CTK3YML112W ABM1P47146 123 aa1.93□□□□□ -2.1
CTK3YML112W PMT5P52867 743 aa1.93□□□□□ -2.1
CTK3YML112W SXM1Q04175 944 aaKnown RBP1.93□□□□□ -2.1
CTK3YML112W URC2Q04411 772 aa1.93□□□□□ -2.1
CTK3YML112W YPR195CQ06594 109 aa1.93□□□□□ -2.1
CTK3YML112W LDS2Q08218 356 aa1.93□□□□□ -2.1
CTK3YML112W SLF1Q12034 447 aaKnown RBP1.93□□□□□ -2.1
CTK3YML112W SRO7Q12038 1033 aa1.93□□□□□ -2.1
CTK3YML112W YDR061WQ12298 539 aa1.93□□□□□ -2.1
CTK3YML112W SFM1Q12314 213 aa1.93□□□□□ -2.1
CTK3YML112W HIF1Q12373 385 aa1.93□□□□□ -2.1
CTK3YML112W MSP1P28737 362 aa1.92□□□□□ -2.1
CTK3YML112W TOA1P32773 286 aa1.92□□□□□ -2.1
CTK3YML112W YSC83P32792 385 aa1.92□□□□□ -2.1
CTK3YML112W FRT2P39734 528 aa1.92□□□□□ -2.1
CTK3YML112W COQ5P49017 307 aa1.92□□□□□ -2.1
CTK3YML112W RTT102P53330 157 aa1.92□□□□□ -2.1
CTK3YML112W VAC7P53950 1165 aa1.92□□□□□ -2.1
CTK3YML112W SMC6Q12749 1114 aa1.92□□□□□ -2.1
CTK3YML112W CHA1P25379 360 aaKnown RBP1.91□□□□□ -2.1
CTK3YML112W FHL1P39521 936 aa1.91□□□□□ -2.1
CTK3YML112W HEM14P40012 539 aa1.91□□□□□ -2.1
CTK3YML112W GYL1Q04322 720 aa1.91□□□□□ -2.1
CTK3YML112W YDL109CQ12103 647 aa1.91□□□□□ -2.1
CTK3YML112W SRN2Q99176 213 aa1.91□□□□□ -2.1
CTK3YML112W YOL085CQ99345 113 aa1.91□□□□□ -2.1
CTK3YML112W HEM4P06174 275 aa1.9□□□□□ -2.11
CTK3YML112W ANP1P32629 500 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms