RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W TDH3P00359 332 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
LCB5YLR260W MATALPHA1P0CY06 175 aa3.39□□□□□ -1.87
LCB5YLR260W HMLALPHA1P0CY07 175 aa3.39□□□□□ -1.87
LCB5YLR260W RAD57P25301 460 aa3.39□□□□□ -1.87
LCB5YLR260W RIM1P32445 135 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W KAR9P32526 644 aa3.39□□□□□ -1.87
LCB5YLR260W ECT1P33412 323 aa3.39□□□□□ -1.87
LCB5YLR260W PAD1P33751 242 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
LCB5YLR260W YPT52P36018 234 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W SRX1P36077 127 aa3.39□□□□□ -1.87
LCB5YLR260W CHK1P38147 527 aa3.39□□□□□ -1.87
LCB5YLR260W YHR112CP38716 378 aa3.39□□□□□ -1.87
LCB5YLR260W PFS1P38872 237 aa3.39□□□□□ -1.87
LCB5YLR260W CTF8P38877 133 aa3.39□□□□□ -1.87
LCB5YLR260W PCF11P39081 626 aaPredicted RBP3.39□□□□□ -1.87
LCB5YLR260W GLG2P47011 380 aa3.39□□□□□ -1.87
LCB5YLR260W AIM23P47015 356 aa3.39□□□□□ -1.87
LCB5YLR260W IMO32P53219 342 aa3.39□□□□□ -1.87
LCB5YLR260W GND2P53319 492 aa3.39□□□□□ -1.87
LCB5YLR260W CUS2P53830 285 aaPredicted RBP3.39□□□□□ -1.87
LCB5YLR260W YNL040WP53960 456 aaPredicted RBP3.39□□□□□ -1.87
LCB5YLR260W COX20Q04935 205 aa3.39□□□□□ -1.87
LCB5YLR260W NOP12Q08208 459 aaKnown RBP3.39□□□□□ -1.87
LCB5YLR260W SRO7Q12038 1033 aa3.39□□□□□ -1.87
LCB5YLR260W POM34Q12445 299 aa3.39□□□□□ -1.87
LCB5YLR260W IZH4Q99393 312 aa3.39□□□□□ -1.87
LCB5YLR260W GAL4P04386 881 aa3.38□□□□□ -1.87
LCB5YLR260W YPK1P12688 680 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W UTR1P21373 530 aa3.38□□□□□ -1.87
LCB5YLR260W PBN1P25580 416 aa3.38□□□□□ -1.87
LCB5YLR260W RFA2P26754 273 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W PMI40P29952 429 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W DCG1P32460 244 aa3.38□□□□□ -1.87
LCB5YLR260W LIP5P32875 414 aa3.38□□□□□ -1.87
LCB5YLR260W AIM29P36154 155 aa3.38□□□□□ -1.87
LCB5YLR260W MED8P38304 223 aa3.38□□□□□ -1.87
LCB5YLR260W YPT35P38815 214 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W EGD2P38879 174 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W YJL206CP39529 758 aa3.38□□□□□ -1.87
LCB5YLR260W BUR6P40096 142 aa3.38□□□□□ -1.87
LCB5YLR260W PAN6P40459 309 aa3.38□□□□□ -1.87
LCB5YLR260W SWP82P43554 623 aa3.38□□□□□ -1.87
LCB5YLR260W DPB11P47027 764 aaPredicted RBP3.38□□□□□ -1.87
LCB5YLR260W MNN10P50108 393 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W ROG1P53118 685 aa3.38□□□□□ -1.87
LCB5YLR260W USA1Q03714 838 aa3.38□□□□□ -1.87
LCB5YLR260W YLR283WQ05867 314 aa3.38□□□□□ -1.87
LCB5YLR260W SWC7Q06707 132 aa3.38□□□□□ -1.87
LCB5YLR260W PAA1Q12447 191 aaKnown RBP3.38□□□□□ -1.87
LCB5YLR260W NAG1Q8TGN9 163 aa3.38□□□□□ -1.87
LCB5YLR260W HIS1P00498 297 aaKnown RBP3.37□□□□□ -1.87
LCB5YLR260W HXT2P23585 541 aa3.37□□□□□ -1.87
LCB5YLR260W CIN8P27895 1000 aa3.37□□□□□ -1.87
LCB5YLR260W YPS1P32329 569 aa3.37□□□□□ -1.87
LCB5YLR260W UBC6P33296 250 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W YBR144CP34215 104 aa3.37□□□□□ -1.87
LCB5YLR260W OMA1P36163 345 aa3.37□□□□□ -1.87
LCB5YLR260W SUR2P38992 349 aa3.37□□□□□ -1.87
LCB5YLR260W YEL028WP39989 153 aa3.37□□□□□ -1.87
LCB5YLR260W TIF34P40217 347 aaKnown RBP3.37□□□□□ -1.87
LCB5YLR260W RFC4P40339 323 aaKnown RBP3.37□□□□□ -1.87
LCB5YLR260W SDP1P40479 209 aa3.37□□□□□ -1.87
LCB5YLR260W YPS6P40583 537 aa3.37□□□□□ -1.87
LCB5YLR260W TFG2P41896 400 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W HIT1P46973 164 aa3.37□□□□□ -1.87
LCB5YLR260W FMP33P46998 180 aa3.37□□□□□ -1.87
LCB5YLR260W YGR127WP53275 312 aa3.37□□□□□ -1.87
LCB5YLR260W TIM13P53299 105 aa3.37□□□□□ -1.87
LCB5YLR260W YNL260CP53846 198 aa3.37□□□□□ -1.87
LCB5YLR260W VAC7P53950 1165 aa3.37□□□□□ -1.87
LCB5YLR260W DIA1P54005 336 aa3.37□□□□□ -1.87
LCB5YLR260W YAT1P80235 687 aa3.37□□□□□ -1.87
LCB5YLR260W YMR160WQ03823 816 aa3.37□□□□□ -1.87
LCB5YLR260W ARP10Q04549 284 aa3.37□□□□□ -1.87
LCB5YLR260W ARR3Q06598 404 aa3.37□□□□□ -1.87
LCB5YLR260W MCM21Q06675 368 aa3.37□□□□□ -1.87
LCB5YLR260W CDA1Q06702 301 aa3.37□□□□□ -1.87
LCB5YLR260W SAM4Q08985 325 aaKnown RBP3.37□□□□□ -1.87
LCB5YLR260W VAM3Q12241 283 aa3.37□□□□□ -1.87
LCB5YLR260W YOR029WQ12243 111 aa3.37□□□□□ -1.87
LCB5YLR260W YDL177CQ12257 170 aa3.37□□□□□ -1.87
LCB5YLR260W PEX11Q12462 236 aa3.37□□□□□ -1.87
LCB5YLR260W COX5AP00424 153 aa3.37□□□□□ -1.87
LCB5YLR260W PMR1P13586 950 aa3.37□□□□□ -1.87
LCB5YLR260W ABF1P14164 731 aa3.37□□□□□ -1.87
LCB5YLR260W ZRC1P20107 442 aa3.37□□□□□ -1.87
LCB5YLR260W MRPL8P22353 238 aa3.37□□□□□ -1.87
LCB5YLR260W DPB2P24482 689 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W PPA2P28239 310 aa3.37□□□□□ -1.87
LCB5YLR260W MEI4P29467 408 aa3.37□□□□□ -1.87
LCB5YLR260W RTC3P38804 111 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W ALP1P38971 573 aa3.37□□□□□ -1.87
LCB5YLR260W AGE2P40529 298 aa3.37□□□□□ -1.87
LCB5YLR260W CDC40P40968 455 aaPredicted RBP3.37□□□□□ -1.87
LCB5YLR260W RPS10BP46784 105 aaKnown RBP3.37□□□□□ -1.87
LCB5YLR260W UBX6P47049 396 aa3.37□□□□□ -1.87
LCB5YLR260W SNX4P47057 423 aa3.37□□□□□ -1.87
LCB5YLR260W RFX1P48743 811 aa3.37□□□□□ -1.87
LCB5YLR260W SNO2P53823 222 aa3.37□□□□□ -1.87
LCB5YLR260W EFM6P53970 246 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms