RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W RPL21AQ02753 160 aaKnown RBP2.33□□□□□ -2.04
VMA21YGR105W PRP3Q03338 469 aaPredicted RBP2.33□□□□□ -2.04
VMA21YGR105W PIN3Q06449 215 aa2.33□□□□□ -2.04
VMA21YGR105W RPL21BQ12672 160 aaKnown RBP2.33□□□□□ -2.04
VMA21YGR105W LTV1P34078 463 aa2.32□□□□□ -2.04
VMA21YGR105W PFF1P38244 976 aa2.32□□□□□ -2.04
VMA21YGR105W YER184CP39961 794 aa2.32□□□□□ -2.04
VMA21YGR105W VHT1P53241 593 aa2.32□□□□□ -2.04
VMA21YGR105W MEH1Q02205 184 aa2.32□□□□□ -2.04
VMA21YGR105W MSC3Q05812 728 aa2.32□□□□□ -2.04
VMA21YGR105W RAX2Q12465 1220 aa2.32□□□□□ -2.04
VMA21YGR105W STE7P06784 515 aa2.31□□□□□ -2.04
VMA21YGR105W RPS18AP0CX55 146 aaKnown RBP2.31□□□□□ -2.04
VMA21YGR105W RPS18BP0CX56 146 aaPredicted RBP2.31□□□□□ -2.04
VMA21YGR105W PUT4P15380 627 aa2.31□□□□□ -2.04
VMA21YGR105W CHA1P25379 360 aaKnown RBP2.31□□□□□ -2.04
VMA21YGR105W PDC2P32896 925 aa2.31□□□□□ -2.04
VMA21YGR105W SOL2P37262 315 aa2.31□□□□□ -2.04
VMA21YGR105W DTR1P38125 572 aa2.31□□□□□ -2.04
VMA21YGR105W LSM12P38828 187 aaKnown RBP2.31□□□□□ -2.04
VMA21YGR105W WSS1P38838 269 aa2.31□□□□□ -2.04
VMA21YGR105W PAC11P40960 533 aa2.31□□□□□ -2.04
VMA21YGR105W CIN2P46670 268 aa2.31□□□□□ -2.04
VMA21YGR105W TRF5P48561 642 aaKnown RBP2.31□□□□□ -2.04
VMA21YGR105W SEH1P53011 349 aaKnown RBP2.31□□□□□ -2.04
VMA21YGR105W PRP38Q00723 242 aaPredicted RBP2.31□□□□□ -2.04
VMA21YGR105W YPL107WQ02873 248 aa2.31□□□□□ -2.04
VMA21YGR105W GYL1Q04322 720 aa2.31□□□□□ -2.04
VMA21YGR105W YLR177WQ06251 628 aa2.31□□□□□ -2.04
VMA21YGR105W LDS2Q08218 356 aa2.31□□□□□ -2.04
VMA21YGR105W PRM7Q12459 698 aa2.31□□□□□ -2.04
VMA21YGR105W BMT2P38278 337 aa2.3□□□□□ -2.04
VMA21YGR105W CHL4P38907 458 aa2.3□□□□□ -2.04
VMA21YGR105W YDR115WQ04598 105 aa2.3□□□□□ -2.04
VMA21YGR105W NDL1Q06568 189 aa2.3□□□□□ -2.04
VMA21YGR105W TIR4Q12218 487 aaPredicted RBP2.3□□□□□ -2.04
VMA21YGR105W SMC6Q12749 1114 aa2.3□□□□□ -2.04
VMA21YGR105W MEX67Q99257 599 aaKnown RBP2.3□□□□□ -2.04
VMA21YGR105W RNA1P11745 407 aaKnown RBP2.29□□□□□ -2.04
VMA21YGR105W MNL1P38888 796 aa2.29□□□□□ -2.04
VMA21YGR105W PEX22P39718 180 aa2.29□□□□□ -2.04
VMA21YGR105W SEC27P41811 889 aaKnown RBP2.29□□□□□ -2.04
VMA21YGR105W RTT102P53330 157 aa2.29□□□□□ -2.04
VMA21YGR105W HST1P53685 503 aa2.29□□□□□ -2.04
VMA21YGR105W VAC7P53950 1165 aa2.29□□□□□ -2.04
VMA21YGR105W YDR541CQ03049 344 aa2.29□□□□□ -2.04
VMA21YGR105W ERO1Q03103 563 aa2.29□□□□□ -2.04
VMA21YGR105W YOR376WQ08900 122 aa2.29□□□□□ -2.04
VMA21YGR105W SPE3Q12074 293 aaKnown RBP2.29□□□□□ -2.04
VMA21YGR105W TPI1P00942 248 aaKnown RBP2.28□□□□□ -2.04
VMA21YGR105W MSP1P28737 362 aa2.28□□□□□ -2.04
VMA21YGR105W ANP1P32629 500 aa2.28□□□□□ -2.04
VMA21YGR105W TOA1P32773 286 aa2.28□□□□□ -2.04
VMA21YGR105W FMT1P32785 401 aa2.28□□□□□ -2.04
VMA21YGR105W SRP72P38688 640 aaKnown RBP2.28□□□□□ -2.04
VMA21YGR105W PFS2P42841 465 aaKnown RBP2.28□□□□□ -2.04
VMA21YGR105W BUD27P43573 796 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
VMA21YGR105W CTK3P46963 296 aaPredicted RBP2.28□□□□□ -2.04
VMA21YGR105W GAT3Q07928 141 aa2.28□□□□□ -2.04
VMA21YGR105W YPS3Q12303 508 aa2.28□□□□□ -2.04
VMA21YGR105W HMS1Q12398 434 aa2.28□□□□□ -2.04
VMA21YGR105W RPL1AP0CX43 217 aaKnown RBP2.27□□□□□ -2.05
VMA21YGR105W RPL1BP0CX44 217 aaKnown RBP2.27□□□□□ -2.05
VMA21YGR105W ASP3-2P0CX77 362 aa2.27□□□□□ -2.05
VMA21YGR105W ASP3-3P0CX78 362 aa2.27□□□□□ -2.05
VMA21YGR105W ASP3-4P0CX79 362 aa2.27□□□□□ -2.05
VMA21YGR105W ASP3-1P0CZ17 362 aa2.27□□□□□ -2.05
VMA21YGR105W MAS2P11914 482 aa2.27□□□□□ -2.05
VMA21YGR105W SMP1P38128 452 aa2.27□□□□□ -2.05
VMA21YGR105W SPP381P38282 291 aaPredicted RBP2.27□□□□□ -2.05
VMA21YGR105W YHR177WP38867 453 aa2.27□□□□□ -2.05
VMA21YGR105W VEL1P53058 206 aa2.27□□□□□ -2.05
VMA21YGR105W CIK1Q01649 594 aa2.27□□□□□ -2.05
VMA21YGR105W YMR010WQ03687 405 aa2.27□□□□□ -2.05
VMA21YGR105W NOP6Q07623 225 aaKnown RBP2.27□□□□□ -2.05
VMA21YGR105W RPN5Q12250 445 aaKnown RBP2.27□□□□□ -2.05
VMA21YGR105W SFM1Q12314 213 aa2.27□□□□□ -2.05
VMA21YGR105W VMA8P32610 256 aaKnown RBP2.26□□□□□ -2.05
VMA21YGR105W FHL1P39521 936 aa2.26□□□□□ -2.05
VMA21YGR105W EFM4P40516 257 aa2.26□□□□□ -2.05
VMA21YGR105W FSH2Q05015 223 aa2.26□□□□□ -2.05
VMA21YGR105W AAD15Q08361 143 aa2.26□□□□□ -2.05
VMA21YGR105W SRO7Q12038 1033 aa2.26□□□□□ -2.05
VMA21YGR105W RFM1Q12192 310 aa2.26□□□□□ -2.05
VMA21YGR105W YDR061WQ12298 539 aa2.26□□□□□ -2.05
VMA21YGR105W RPS19AP07280 144 aaKnown RBP2.25□□□□□ -2.05
VMA21YGR105W RPS19BP07281 144 aaPredicted RBP2.25□□□□□ -2.05
VMA21YGR105W MPE1P35728 441 aaKnown RBP2.25□□□□□ -2.05
VMA21YGR105W YBR241CP38142 488 aa2.25□□□□□ -2.05
VMA21YGR105W KAP104P38217 918 aaKnown RBP2.25□□□□□ -2.05
VMA21YGR105W LCB2P40970 561 aa2.25□□□□□ -2.05
VMA21YGR105W YGR067CP53243 804 aa2.25□□□□□ -2.05
VMA21YGR105W ATP16Q12165 160 aa2.25□□□□□ -2.05
VMA21YGR105W BI3Q9ZZW7 517 aa2.25□□□□□ -2.05
VMA21YGR105W HEM4P06174 275 aa2.24□□□□□ -2.05
VMA21YGR105W UNG1P12887 359 aa2.24□□□□□ -2.05
VMA21YGR105W RPL16AP26784 199 aaKnown RBP2.24□□□□□ -2.05
VMA21YGR105W TPS2P31688 896 aaKnown RBP2.24□□□□□ -2.05
VMA21YGR105W PRY2P36110 329 aa2.24□□□□□ -2.05
VMA21YGR105W ASN2P49090 572 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms