RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	EFB1	P32471	206 aa	Known RBP	4.16	□□□□□ -1.74
LSM6	YDR378C	LYS12	P40495	371 aa	Known RBP	4.16	□□□□□ -1.74
LSM6	YDR378C	SHE10	P53075	577 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	SHY1	P53266	389 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	CRH1	P53301	507 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	RET3	P53600	189 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	YNL143C	P53908	130 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	UTP6	Q02354	440 aa	Known RBP	4.16	□□□□□ -1.74
LSM6	YDR378C	YDL114W	Q07530	308 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	YOR338W	Q99326	363 aa		4.16	□□□□□ -1.74
LSM6	YDR378C	THR4	P16120	514 aa	Known RBP	4.15	□□□□□ -1.75
LSM6	YDR378C	SMI1	P32566	505 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	RTC2	P38279	296 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	SDS24	P38314	527 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	EGT2	P42835	1041 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	CUE3	P53137	624 aa	Known RBP	4.15	□□□□□ -1.75
LSM6	YDR378C	TMC1	Q08422	150 aa	Predicted RBP	4.15	□□□□□ -1.75
LSM6	YDR378C	GLE1	Q12315	538 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	NAG1	Q8TGN9	163 aa		4.15	□□□□□ -1.75
LSM6	YDR378C	AAT2	P23542	418 aa	Known RBP	4.14	□□□□□ -1.75
LSM6	YDR378C	MIG3	P39943	394 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	OXA1	P39952	402 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	SEC9	P40357	651 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	UTP18	P40362	594 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM6	YDR378C	YIL089W	P40500	205 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	ABM1	P47146	123 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	BNS1	P50084	137 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	YMR310C	Q04867	317 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM6	YDR378C	YDR286C	Q05530	114 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	SHS1	Q07657	551 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	FSH3	Q99369	266 aa		4.14	□□□□□ -1.75
LSM6	YDR378C	MAS1	P10507	462 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	MAS2	P11914	482 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	DBR1	P24309	405 aa	Known RBP	4.13	□□□□□ -1.75
LSM6	YDR378C	NUP2	P32499	720 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	GAB1	P41733	394 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	AIP1	P46680	615 aa	Known RBP	4.13	□□□□□ -1.75
LSM6	YDR378C	PRM1	P53835	661 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	MHR1	Q06630	226 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	PGC1	Q08959	321 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	SFG1	Q12507	346 aa		4.13	□□□□□ -1.75
LSM6	YDR378C	STE3	P06783	470 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	TAL1	P15019	335 aa	Known RBP	4.12	□□□□□ -1.75
LSM6	YDR378C	FUN26	P31381	517 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	HMX1	P32339	317 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
LSM6	YDR378C	YEL043W	P32618	956 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	SPO23	P33757	523 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	PTK1	P36002	662 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM6	YDR378C	UIP5	P36137	443 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	ATG18	P43601	500 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	YGL039W	P53183	348 aa	Known RBP	4.12	□□□□□ -1.75
LSM6	YDR378C	AIM33	Q04516	312 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	LIP2	Q06005	328 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	HMS1	Q12398	434 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	YDL199C	Q12407	687 aa		4.12	□□□□□ -1.75
LSM6	YDR378C	HXT1	P32465	570 aa		4.11	□□□□□ -1.75
LSM6	YDR378C	ANR2	P36090	516 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM6	YDR378C	EFM3	P47163	339 aa		4.11	□□□□□ -1.75
LSM6	YDR378C	REX2	P54964	269 aa	Known RBP	4.11	□□□□□ -1.75
LSM6	YDR378C	YET2	Q04210	160 aa		4.11	□□□□□ -1.75
LSM6	YDR378C	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
LSM6	YDR378C	PML1	Q07930	204 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM6	YDR378C	PSY3	Q12318	242 aa		4.11	□□□□□ -1.75
LSM6	YDR378C	RPS18A	P0CX55	146 aa	Known RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	RPS18B	P0CX56	146 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	SAG1	P20840	650 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	ANP1	P32629	500 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	YHR182W	P38870	785 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	PTI1	P39927	425 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	LCP5	P40079	357 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	FYV8	P46949	817 aa	Known RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	TRF5	P48561	642 aa	Known RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	CWC22	P53333	577 aa	Known RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	RRB1	Q04225	511 aa	Known RBP	4.1	□□□□□ -1.75
LSM6	YDR378C	MFG1	Q07684	458 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	GAT3	Q07928	141 aa		4.1	□□□□□ -1.75
LSM6	YDR378C	VAM7	P32912	316 aa		4.09	□□□□□ -1.75
LSM6	YDR378C	BAT1	P38891	393 aa	Known RBP	4.09	□□□□□ -1.75
LSM6	YDR378C	YLH47	Q06493	454 aa		4.09	□□□□□ -1.75
LSM6	YDR378C	YOL075C	Q08234	1294 aa		4.09	□□□□□ -1.75
LSM6	YDR378C	YOR012W	Q12351	137 aa		4.09	□□□□□ -1.75
LSM6	YDR378C	VMA2	P16140	517 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	TPM1	P17536	199 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	TRX1	P22217	103 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	CDC50	P25656	391 aa		4.08	□□□□□ -1.76
LSM6	YDR378C	RPL16A	P26784	199 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	SPR1	P32603	445 aa		4.08	□□□□□ -1.76
LSM6	YDR378C	LSM12	P38828	187 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	YER186C	P40101	306 aa		4.08	□□□□□ -1.76
LSM6	YDR378C	HST1	P53685	503 aa		4.08	□□□□□ -1.76
LSM6	YDR378C	PDR16	P53860	351 aa	Known RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	SKI8	Q02793	397 aa	Predicted RBP	4.08	□□□□□ -1.76
LSM6	YDR378C	ARR1	Q06596	294 aa		4.08	□□□□□ -1.76
LSM6	YDR378C	CKI1	P20485	582 aa		4.07	□□□□□ -1.76
LSM6	YDR378C	GRR1	P24814	1151 aa		4.07	□□□□□ -1.76
LSM6	YDR378C	OM14	P38325	134 aa		4.07	□□□□□ -1.76
LSM6	YDR378C	CIN2	P46670	268 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms