RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W OLA1P38219 394 aaKnown RBP2.42□□□□□ -2.02
VMA21YGR105W INM1P38710 295 aa2.42□□□□□ -2.02
VMA21YGR105W PFS1P38872 237 aa2.42□□□□□ -2.02
VMA21YGR105W ALD5P40047 520 aaKnown RBP2.42□□□□□ -2.02
VMA21YGR105W YPS5P53057 165 aa2.42□□□□□ -2.02
VMA21YGR105W PIB2P53191 635 aa2.42□□□□□ -2.02
VMA21YGR105W YGR117CP53270 476 aa2.42□□□□□ -2.02
VMA21YGR105W RMT2Q03305 412 aa2.42□□□□□ -2.02
VMA21YGR105W ECM11Q04110 302 aa2.42□□□□□ -2.02
VMA21YGR105W PRM6Q04705 352 aa2.42□□□□□ -2.02
VMA21YGR105W YPR091CQ06833 770 aa2.42□□□□□ -2.02
VMA21YGR105W CBP6P07253 162 aaPredicted RBP2.41□□□□□ -2.02
VMA21YGR105W ZRC1P20107 442 aa2.41□□□□□ -2.02
VMA21YGR105W GPI16P38875 610 aa2.41□□□□□ -2.02
VMA21YGR105W TOS2P50078 622 aa2.41□□□□□ -2.02
VMA21YGR105W YGL262WP53054 175 aa2.41□□□□□ -2.02
VMA21YGR105W SKI8Q02793 397 aaPredicted RBP2.41□□□□□ -2.02
VMA21YGR105W SPC19Q03954 165 aa2.41□□□□□ -2.02
VMA21YGR105W AIM32Q04689 311 aa2.41□□□□□ -2.02
VMA21YGR105W YLR456WQ06199 204 aa2.41□□□□□ -2.02
VMA21YGR105W FCY22Q12119 530 aa2.41□□□□□ -2.02
VMA21YGR105W RUP1Q12242 671 aa2.41□□□□□ -2.02
VMA21YGR105W OPI3P05375 206 aa2.4□□□□□ -2.03
VMA21YGR105W HSP104P31539 908 aaKnown RBP2.4□□□□□ -2.03
VMA21YGR105W COX13P32799 129 aa2.4□□□□□ -2.03
VMA21YGR105W FAD1P38913 306 aa2.4□□□□□ -2.03
VMA21YGR105W IGD1P43598 195 aa2.4□□□□□ -2.03
VMA21YGR105W IES4Q08561 116 aa2.4□□□□□ -2.03
VMA21YGR105W PAB1P04147 577 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03 RIP-Chip
VMA21YGR105W RAD5P32849 1169 aaPredicted RBP2.39□□□□□ -2.03
VMA21YGR105W GPX2P38143 162 aa2.39□□□□□ -2.03
VMA21YGR105W ECM8P38246 354 aa2.39□□□□□ -2.03
VMA21YGR105W SLX1P38324 304 aa2.39□□□□□ -2.03
VMA21YGR105W STE24P47154 453 aa2.39□□□□□ -2.03
VMA21YGR105W YGR111WP53265 400 aa2.39□□□□□ -2.03
VMA21YGR105W YDR341CQ05506 607 aaKnown RBP2.39□□□□□ -2.03
VMA21YGR105W UAF30Q08747 228 aa2.39□□□□□ -2.03
VMA21YGR105W RNH203Q12338 110 aa2.39□□□□□ -2.03
VMA21YGR105W ISA2Q12425 185 aa2.39□□□□□ -2.03
VMA21YGR105W FOL3Q12676 427 aaPredicted RBP2.39□□□□□ -2.03
VMA21YGR105W HTZ1Q12692 134 aaKnown RBP2.39□□□□□ -2.03
VMA21YGR105W MDH1P17505 334 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VMA21YGR105W DBF4P32325 704 aa2.38□□□□□ -2.03
VMA21YGR105W MRPL27P36526 146 aaPredicted RBP2.38□□□□□ -2.03
VMA21YGR105W ATM1P40416 690 aa2.38□□□□□ -2.03
VMA21YGR105W PMT5P52867 743 aa2.38□□□□□ -2.03
VMA21YGR105W TPS1Q00764 495 aaKnown RBP2.38□□□□□ -2.03
VMA21YGR105W ECM7Q06200 448 aa2.38□□□□□ -2.03
VMA21YGR105W YOP1Q12402 180 aa2.38□□□□□ -2.03
VMA21YGR105W YDL199CQ12407 687 aa2.38□□□□□ -2.03
VMA21YGR105W SLM5P25345 492 aaKnown RBP2.37□□□□□ -2.03
VMA21YGR105W SKT5P34226 696 aa2.37□□□□□ -2.03
VMA21YGR105W MCR1P36060 302 aaKnown RBP2.37□□□□□ -2.03
VMA21YGR105W QDR3P38227 689 aa2.37□□□□□ -2.03
VMA21YGR105W ROG1P53118 685 aa2.37□□□□□ -2.03
VMA21YGR105W FLC3P53121 802 aa2.37□□□□□ -2.03
VMA21YGR105W RRN9P53437 365 aa2.37□□□□□ -2.03
VMA21YGR105W TRM112P53738 135 aaPredicted RBP2.37□□□□□ -2.03
VMA21YGR105W KTR6P54070 446 aa2.37□□□□□ -2.03
VMA21YGR105W YHC1Q05900 231 aaKnown RBP2.37□□□□□ -2.03
VMA21YGR105W MCH1Q07376 486 aa2.37□□□□□ -2.03
VMA21YGR105W YDL114WQ07530 308 aa2.37□□□□□ -2.03
VMA21YGR105W NSE1Q07913 336 aa2.37□□□□□ -2.03
VMA21YGR105W DCI1Q08558 271 aa2.37□□□□□ -2.03
VMA21YGR105W TPK3P05986 398 aa2.36□□□□□ -2.03
VMA21YGR105W CMK2P22517 447 aa2.36□□□□□ -2.03
VMA21YGR105W PHO91P27514 894 aa2.36□□□□□ -2.03
VMA21YGR105W FUN26P31381 517 aa2.36□□□□□ -2.03
VMA21YGR105W DEP1P31385 405 aa2.36□□□□□ -2.03
VMA21YGR105W NRP1P32770 719 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
VMA21YGR105W TIR2P33890 251 aa2.36□□□□□ -2.03
VMA21YGR105W GEP4P38812 185 aa2.36□□□□□ -2.03
VMA21YGR105W YIP5P53108 310 aa2.36□□□□□ -2.03
VMA21YGR105W RPL12AP0CX53 165 aaKnown RBP2.35□□□□□ -2.03
VMA21YGR105W RPL12BP0CX54 165 aa2.35□□□□□ -2.03
VMA21YGR105W YSC83P32792 385 aa2.35□□□□□ -2.03
VMA21YGR105W ECT1P33412 323 aa2.35□□□□□ -2.03
VMA21YGR105W SEC9P40357 651 aa2.35□□□□□ -2.03
VMA21YGR105W ABM1P47146 123 aa2.35□□□□□ -2.03
VMA21YGR105W ATP22P50273 684 aaPredicted RBP2.35□□□□□ -2.03
VMA21YGR105W ASA1Q06822 443 aa2.35□□□□□ -2.03
VMA21YGR105W MCT1Q12283 360 aa2.35□□□□□ -2.03
VMA21YGR105W GPM3Q12326 303 aa2.35□□□□□ -2.03
VMA21YGR105W PDE2P06776 526 aa2.34□□□□□ -2.03
VMA21YGR105W ARF1P11076 181 aaKnown RBP2.34□□□□□ -2.03
VMA21YGR105W DPH2P32461 534 aa2.34□□□□□ -2.03
VMA21YGR105W ZUO1P32527 433 aaKnown RBP2.34□□□□□ -2.03
VMA21YGR105W SPO23P33757 523 aa2.34□□□□□ -2.03
VMA21YGR105W DOA1P36037 715 aa2.34□□□□□ -2.03
VMA21YGR105W WSC4P38739 605 aa2.34□□□□□ -2.03
VMA21YGR105W KEG1P43614 200 aa2.34□□□□□ -2.03
VMA21YGR105W ENT5Q03769 411 aaKnown RBP2.34□□□□□ -2.03
VMA21YGR105W URC2Q04411 772 aa2.34□□□□□ -2.03
VMA21YGR105W PCL9Q12477 304 aa2.34□□□□□ -2.03
VMA21YGR105W GIT1P25346 518 aa2.33□□□□□ -2.04
VMA21YGR105W TOA2P32774 122 aa2.33□□□□□ -2.04
VMA21YGR105W HEM14P40012 539 aa2.33□□□□□ -2.04
VMA21YGR105W YFL012WP43580 148 aa2.33□□□□□ -2.04
VMA21YGR105W AIP1P46680 615 aaKnown RBP2.33□□□□□ -2.04
VMA21YGR105W REX2P54964 269 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 270.2 ms