RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RPS0AP32905 252 aaKnown RBP3.32□□□□□ -1.88
PRP18YGR006W MCR1P36060 302 aaKnown RBP3.32□□□□□ -1.88
PRP18YGR006W AIM24P47127 394 aa3.32□□□□□ -1.88
PRP18YGR006W SDT1P53078 280 aa3.32□□□□□ -1.88
PRP18YGR006W GIS2P53849 153 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
PRP18YGR006W YPL107WQ02873 248 aa3.32□□□□□ -1.88
PRP18YGR006W LDS2Q08218 356 aa3.32□□□□□ -1.88
PRP18YGR006W CUE5Q08412 411 aaKnown RBP3.32□□□□□ -1.88
PRP18YGR006W HRT3Q12347 344 aa3.32□□□□□ -1.88
PRP18YGR006W JID1Q12350 301 aa3.32□□□□□ -1.88
PRP18YGR006W FRE6Q12473 712 aa3.32□□□□□ -1.88
PRP18YGR006W ADH2P00331 348 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W PIS1P06197 220 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W MSI1P13712 422 aa3.31□□□□□ -1.88
PRP18YGR006W RPB5P20434 215 aa3.31□□□□□ -1.88
PRP18YGR006W VPH1P32563 840 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W RAD5P32849 1169 aaPredicted RBP3.31□□□□□ -1.88
PRP18YGR006W YOX1P34161 385 aa3.31□□□□□ -1.88
PRP18YGR006W SPT10P35208 640 aa3.31□□□□□ -1.88
PRP18YGR006W SWD3P38123 315 aa3.31□□□□□ -1.88
PRP18YGR006W HAC1P41546 238 aa3.31□□□□□ -1.88
PRP18YGR006W MPP10P47083 593 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W YJR085CP47131 105 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W ADA2Q02336 434 aa3.31□□□□□ -1.88
PRP18YGR006W NOP6Q07623 225 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
PRP18YGR006W SPT7P35177 1332 aa3.3□□□□□ -1.88
PRP18YGR006W SSC1P0CS90 654 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W REV1P12689 985 aa3.3□□□□□ -1.88
PRP18YGR006W OPI1P21957 404 aa3.3□□□□□ -1.88
PRP18YGR006W PHO84P25297 587 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W DPH5P32469 300 aaPredicted RBP3.3□□□□□ -1.88
PRP18YGR006W CSE2P33308 149 aa3.3□□□□□ -1.88
PRP18YGR006W YSW1P38280 609 aa3.3□□□□□ -1.88
PRP18YGR006W SPP381P38282 291 aaPredicted RBP3.3□□□□□ -1.88
PRP18YGR006W LCB3P47013 409 aa3.3□□□□□ -1.88
PRP18YGR006W MST27P53176 234 aa3.3□□□□□ -1.88
PRP18YGR006W CWC22P53333 577 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W TRM112P53738 135 aaPredicted RBP3.3□□□□□ -1.88
PRP18YGR006W COS1P53822 381 aa3.3□□□□□ -1.88
PRP18YGR006W YMR027WQ04371 470 aa3.3□□□□□ -1.88
PRP18YGR006W RTN1Q04947 295 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W RIF2Q06208 395 aa3.3□□□□□ -1.88
PRP18YGR006W ASA1Q06822 443 aa3.3□□□□□ -1.88
PRP18YGR006W CMS1Q07897 291 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W WTM1Q12363 437 aaKnown RBP3.3□□□□□ -1.88
PRP18YGR006W RNA1P11745 407 aaKnown RBP3.29□□□□□ -1.88
PRP18YGR006W NAT1P12945 854 aaKnown RBP3.29□□□□□ -1.88
PRP18YGR006W PRR1P28708 518 aa3.29□□□□□ -1.88
PRP18YGR006W FAA1P30624 700 aaKnown RBP3.29□□□□□ -1.88
PRP18YGR006W DPH2P32461 534 aa3.29□□□□□ -1.88
PRP18YGR006W GEP4P38812 185 aa3.29□□□□□ -1.88
PRP18YGR006W YHR131CP38835 850 aa3.29□□□□□ -1.88
PRP18YGR006W YFR057WP43625 151 aa3.29□□□□□ -1.88
PRP18YGR006W TOS2P50078 622 aa3.29□□□□□ -1.88
PRP18YGR006W RRN9P53437 365 aa3.29□□□□□ -1.88
PRP18YGR006W PLP2Q12017 286 aa3.29□□□□□ -1.88
PRP18YGR006W IZH2Q12442 317 aa3.29□□□□□ -1.88
PRP18YGR006W YCR024C-BQ3E7Z8 88 aa3.29□□□□□ -1.88
PRP18YGR006W DAP2P18962 818 aa3.28□□□□□ -1.88
PRP18YGR006W UBA1P22515 1024 aaKnown RBP3.28□□□□□ -1.88
PRP18YGR006W LDB16P25587 256 aa3.28□□□□□ -1.88
PRP18YGR006W TOA2P32774 122 aa3.28□□□□□ -1.88
PRP18YGR006W LAS1P36146 502 aaPredicted RBP3.28□□□□□ -1.88
PRP18YGR006W GPX2P38143 162 aa3.28□□□□□ -1.88
PRP18YGR006W SDS24P38314 527 aa3.28□□□□□ -1.88
PRP18YGR006W YHK8P38776 514 aa3.28□□□□□ -1.88
PRP18YGR006W YHR177WP38867 453 aa3.28□□□□□ -1.88
PRP18YGR006W PRE5P40302 234 aaKnown RBP3.28□□□□□ -1.88
PRP18YGR006W SHE10P53075 577 aa3.28□□□□□ -1.88
PRP18YGR006W CLD1P53264 445 aa3.28□□□□□ -1.88
PRP18YGR006W TDA1Q03533 586 aa3.28□□□□□ -1.88
PRP18YGR006W SMF3Q12078 473 aaPredicted RBP3.28□□□□□ -1.88
PRP18YGR006W AHC1Q12433 566 aa3.28□□□□□ -1.88
PRP18YGR006W MEX67Q99257 599 aaKnown RBP3.28□□□□□ -1.88
PRP18YGR006W DAL5P15365 543 aa3.27□□□□□ -1.89
PRP18YGR006W MRPL8P22353 238 aa3.27□□□□□ -1.89
PRP18YGR006W PSO2P30620 661 aa3.27□□□□□ -1.89
PRP18YGR006W TIR2P33890 251 aa3.27□□□□□ -1.89
PRP18YGR006W MRPL10P36520 322 aa3.27□□□□□ -1.89
PRP18YGR006W AIM10P39965 576 aaKnown RBP3.27□□□□□ -1.89
PRP18YGR006W YDL114WQ07530 308 aa3.27□□□□□ -1.89
PRP18YGR006W NFI1Q12216 726 aa3.27□□□□□ -1.89
PRP18YGR006W RBD2Q12270 262 aa3.27□□□□□ -1.89
PRP18YGR006W EFB1P32471 206 aaKnown RBP3.26□□□□□ -1.89
PRP18YGR006W ADH5P38113 351 aaKnown RBP3.26□□□□□ -1.89
PRP18YGR006W GAB1P41733 394 aa3.26□□□□□ -1.89
PRP18YGR006W RPA34P47006 233 aaPredicted RBP3.26□□□□□ -1.89
PRP18YGR006W BIR1P47134 954 aa3.26□□□□□ -1.89
PRP18YGR006W MPS2P53159 387 aa3.26□□□□□ -1.89
PRP18YGR006W YGL039WP53183 348 aaKnown RBP3.26□□□□□ -1.89
PRP18YGR006W SHY1P53266 389 aa3.26□□□□□ -1.89
PRP18YGR006W YNR068CP53754 272 aa3.26□□□□□ -1.89
PRP18YGR006W RLP24Q07915 199 aaKnown RBP3.26□□□□□ -1.89
PRP18YGR006W PEX27Q08580 376 aa3.26□□□□□ -1.89
PRP18YGR006W PCL9Q12477 304 aa3.26□□□□□ -1.89
PRP18YGR006W NBL1Q3E7Y6 73 aa3.26□□□□□ -1.89
PRP18YGR006W SCH9P11792 824 aaKnown RBP3.25□□□□□ -1.89
PRP18YGR006W RDS1P25611 832 aa3.25□□□□□ -1.89
PRP18YGR006W SPR1P32603 445 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms