RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W ASN2P49090 572 aaKnown RBP1.03□□□□□ -2.25
SMC1YFL008W SDT1P53078 280 aa1.03□□□□□ -2.25
SMC1YFL008W YNL247WP53852 767 aaKnown RBP1.03□□□□□ -2.25
SMC1YFL008W GIP3Q03016 1276 aa1.03□□□□□ -2.25
SMC1YFL008W RSN1Q03516 953 aa1.03□□□□□ -2.25
SMC1YFL008W CUE5Q08412 411 aaKnown RBP1.03□□□□□ -2.25
SMC1YFL008W TIM18Q08749 192 aa1.03□□□□□ -2.25
SMC1YFL008W CPR1P14832 162 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W CLB1P24868 471 aa1.02□□□□□ -2.25
SMC1YFL008W RAD14P28519 371 aa1.02□□□□□ -2.25
SMC1YFL008W NUP2P32499 720 aa1.02□□□□□ -2.25
SMC1YFL008W MRP4P32902 394 aa1.02□□□□□ -2.25
SMC1YFL008W DUG3P53871 357 aa1.02□□□□□ -2.25
SMC1YFL008W KAP120Q02932 1032 aa1.02□□□□□ -2.25
SMC1YFL008W RRB1Q04225 511 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W HUA2Q12134 243 aa1.02□□□□□ -2.25
SMC1YFL008W ENT1Q12518 454 aa1.02□□□□□ -2.25
SMC1YFL008W SAM1P10659 382 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W SAM2P19358 384 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W HSP104P31539 908 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W AFG1P32317 509 aa1.02□□□□□ -2.25
SMC1YFL008W SSO1P32867 290 aa1.02□□□□□ -2.25
SMC1YFL008W UTP18P40362 594 aaPredicted RBP1.02□□□□□ -2.25
SMC1YFL008W FAF1P40546 346 aaPredicted RBP1.02□□□□□ -2.25
SMC1YFL008W CTK3P46963 296 aaPredicted RBP1.02□□□□□ -2.25
SMC1YFL008W POP6P53218 158 aa1.02□□□□□ -2.25
SMC1YFL008W YNL050CP53952 270 aa1.02□□□□□ -2.25
SMC1YFL008W TDA1Q03533 586 aa1.02□□□□□ -2.25
SMC1YFL008W PPM1Q04081 328 aa1.02□□□□□ -2.25
SMC1YFL008W ATG34Q12292 412 aa1.02□□□□□ -2.25
SMC1YFL008W LEU4P06208 619 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W UTP9P38882 575 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W CAJ1P39101 391 aa1.02□□□□□ -2.25
SMC1YFL008W LAM5P43560 674 aa1.02□□□□□ -2.25
SMC1YFL008W URB2P47108 1174 aa1.02□□□□□ -2.25
SMC1YFL008W IGO1P53897 168 aa1.02□□□□□ -2.25
SMC1YFL008W OCA2P53949 197 aa1.02□□□□□ -2.25
SMC1YFL008W VTA1Q06263 330 aa1.02□□□□□ -2.25
SMC1YFL008W AIM45Q12480 344 aaKnown RBP1.02□□□□□ -2.25
SMC1YFL008W CSF1Q12150 2958 aa1.02□□□□□ -2.25
SMC1YFL008W RAD50P12753 1312 aa1.01□□□□□ -2.25
SMC1YFL008W VPS13Q07878 3144 aa1.01□□□□□ -2.25
SMC1YFL008W TPM1P17536 199 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W DAP2P18962 818 aa1.01□□□□□ -2.25
SMC1YFL008W SLY1P22213 666 aa1.01□□□□□ -2.25
SMC1YFL008W BEM1P29366 551 aa1.01□□□□□ -2.25
SMC1YFL008W IME2P32581 645 aa1.01□□□□□ -2.25
SMC1YFL008W NAT2P37293 288 aa1.01□□□□□ -2.25
SMC1YFL008W MRP21P38175 177 aa1.01□□□□□ -2.25
SMC1YFL008W REG2P38232 338 aa1.01□□□□□ -2.25
SMC1YFL008W SMC2P38989 1170 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W ERB1Q04660 807 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W YLR456WQ06199 204 aa1.01□□□□□ -2.25
SMC1YFL008W HIF1Q12373 385 aa1.01□□□□□ -2.25
SMC1YFL008W TY1B-AO13527 1196 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W HSP26P15992 214 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
SMC1YFL008W CDC10P25342 322 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W SPS22P25380 463 aa1.01□□□□□ -2.25
SMC1YFL008W FUN26P31381 517 aa1.01□□□□□ -2.25
SMC1YFL008W HEL1P36113 551 aa1.01□□□□□ -2.25
SMC1YFL008W GPD2P41911 440 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W YFL040WP43562 540 aa1.01□□□□□ -2.25
SMC1YFL008W YGL039WP53183 348 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W CWC22P53333 577 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W PXR1P53335 271 aaPredicted RBP1.01□□□□□ -2.25
SMC1YFL008W HEL2Q05580 639 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W RRP9Q06506 573 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W IES3Q12345 250 aa1.01□□□□□ -2.25
SMC1YFL008W BRR1Q99177 341 aaPredicted RBP1.01□□□□□ -2.25
SMC1YFL008W JIP3O13555 125 aa1.01□□□□□ -2.25
SMC1YFL008W EXG1P23776 448 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W YCR051WP25631 222 aa1.01□□□□□ -2.25
SMC1YFL008W PEP3P27801 918 aa1.01□□□□□ -2.25
SMC1YFL008W YBL059WP34224 193 aa1.01□□□□□ -2.25
SMC1YFL008W SLM4P38247 162 aa1.01□□□□□ -2.25
SMC1YFL008W SEO1P39709 593 aa1.01□□□□□ -2.25
SMC1YFL008W RSM25P40496 264 aa1.01□□□□□ -2.25
SMC1YFL008W CIN2P46670 268 aa1.01□□□□□ -2.25
SMC1YFL008W MPP10P47083 593 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W AZR1P50080 613 aa1.01□□□□□ -2.25
SMC1YFL008W NCS2P53923 493 aaPredicted RBP1.01□□□□□ -2.25
SMC1YFL008W ARP5P53946 755 aa1.01□□□□□ -2.25
SMC1YFL008W SPO19Q03029 223 aa1.01□□□□□ -2.25
SMC1YFL008W YDR239CQ03780 787 aa1.01□□□□□ -2.25
SMC1YFL008W TPT1Q12272 230 aaKnown RBP1.01□□□□□ -2.25
SMC1YFL008W YBL111CQ3E7Y5 667 aa1.01□□□□□ -2.25
SMC1YFL008W YDR034W-BQ6Q5X2 51 aa1.01□□□□□ -2.25
SMC1YFL008W TEF1P02994 458 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W CDC37P06101 506 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W NAT1P12945 854 aaKnown RBP1□□□□□ -2.25
SMC1YFL008W PDX1P16451 410 aa1□□□□□ -2.25
SMC1YFL008W RPB5P20434 215 aa1□□□□□ -2.25
SMC1YFL008W FAR1P21268 830 aa1□□□□□ -2.25
SMC1YFL008W MRPS28P21771 286 aa1□□□□□ -2.25
SMC1YFL008W PSO2P30620 661 aa1□□□□□ -2.25
SMC1YFL008W SMI1P32566 505 aa1□□□□□ -2.25
SMC1YFL008W BMT2P38278 337 aa1□□□□□ -2.25
SMC1YFL008W LYS1P38998 373 aaRIP-Chip data1□□□□□ -2.25not detected
SMC1YFL008W NAS2P40555 220 aa1□□□□□ -2.25
SMC1YFL008W EGT2P42835 1041 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms