RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C DST1P07273 309 aa1.5□□□□□ -2.17
RTR1YER139C CAP2P13517 287 aa1.5□□□□□ -2.17
RTR1YER139C MSI1P13712 422 aa1.5□□□□□ -2.17
RTR1YER139C PHA2P32452 334 aa1.5□□□□□ -2.17
RTR1YER139C ZUO1P32527 433 aaKnown RBP1.5□□□□□ -2.17
RTR1YER139C MPE1P35728 441 aaKnown RBP1.5□□□□□ -2.17
RTR1YER139C MAM33P40513 266 aa1.5□□□□□ -2.17
RTR1YER139C YPS6P40583 537 aa1.5□□□□□ -2.17
RTR1YER139C HAC1P41546 238 aa1.5□□□□□ -2.17
RTR1YER139C TOS3P43637 560 aa1.5□□□□□ -2.17
RTR1YER139C AIM24P47127 394 aa1.5□□□□□ -2.17
RTR1YER139C BNS1P50084 137 aa1.5□□□□□ -2.17
RTR1YER139C ALF1P53904 254 aa1.5□□□□□ -2.17
RTR1YER139C SPR6Q01684 191 aa1.5□□□□□ -2.17
RTR1YER139C PRP42Q03776 544 aaKnown RBP1.5□□□□□ -2.17
RTR1YER139C RPN9Q04062 393 aaKnown RBP1.5□□□□□ -2.17
RTR1YER139C GYL1Q04322 720 aa1.5□□□□□ -2.17
RTR1YER139C YDR061WQ12298 539 aa1.5□□□□□ -2.17
RTR1YER139C SNU66Q12420 587 aaPredicted RBP1.5□□□□□ -2.17
RTR1YER139C ATP1P07251 545 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C DPH5P32469 300 aaPredicted RBP1.49□□□□□ -2.17
RTR1YER139C NIP1P32497 812 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C COX13P32799 129 aa1.49□□□□□ -2.17
RTR1YER139C SKN1P33336 771 aa1.49□□□□□ -2.17
RTR1YER139C PXA2P34230 853 aa1.49□□□□□ -2.17
RTR1YER139C OLA1P38219 394 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C PFF1P38244 976 aa1.49□□□□□ -2.17
RTR1YER139C SRP72P38688 640 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C STP2P38704 541 aa1.49□□□□□ -2.17
RTR1YER139C FAD1P38913 306 aa1.49□□□□□ -2.17
RTR1YER139C MMF1P40185 145 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C LCB3P47013 409 aa1.49□□□□□ -2.17
RTR1YER139C TOM22P49334 152 aa1.49□□□□□ -2.17
RTR1YER139C RRP46P53256 223 aaPredicted RBP1.49□□□□□ -2.17
RTR1YER139C KTR6P54070 446 aa1.49□□□□□ -2.17
RTR1YER139C YMR102CQ03177 834 aa1.49□□□□□ -2.17
RTR1YER139C RTN1Q04947 295 aaKnown RBP1.49□□□□□ -2.17
RTR1YER139C MDM36Q06820 579 aa1.49□□□□□ -2.17
RTR1YER139C SMC5Q08204 1093 aa1.49□□□□□ -2.17
RTR1YER139C YGK3Q12222 375 aaPredicted RBP1.49□□□□□ -2.17
RTR1YER139C GPM3Q12326 303 aa1.49□□□□□ -2.17
RTR1YER139C EAF3Q12432 401 aa1.49□□□□□ -2.17
RTR1YER139C PIS1P06197 220 aaKnown RBP1.48□□□□□ -2.17
RTR1YER139C ALG1P16661 449 aa1.48□□□□□ -2.17
RTR1YER139C RPB5P20434 215 aa1.48□□□□□ -2.17
RTR1YER139C HSP104P31539 908 aaKnown RBP1.48□□□□□ -2.17
RTR1YER139C VMA8P32610 256 aaKnown RBP1.48□□□□□ -2.17
RTR1YER139C CYM1P32898 989 aa1.48□□□□□ -2.17
RTR1YER139C INM1P38710 295 aa1.48□□□□□ -2.17
RTR1YER139C STN1P38960 494 aa1.48□□□□□ -2.17
RTR1YER139C EGT2P42835 1041 aa1.48□□□□□ -2.17
RTR1YER139C ATG18P43601 500 aa1.48□□□□□ -2.17
RTR1YER139C TDA1Q03533 586 aa1.48□□□□□ -2.17
RTR1YER139C YLR456WQ06199 204 aa1.48□□□□□ -2.17
RTR1YER139C LOT6Q07923 191 aa1.48□□□□□ -2.17
RTR1YER139C UAF30Q08747 228 aa1.48□□□□□ -2.17
RTR1YER139C RUP1Q12242 671 aa1.48□□□□□ -2.17
RTR1YER139C APC2Q12440 853 aa1.48□□□□□ -2.17
RTR1YER139C CEX1Q12453 761 aa1.48□□□□□ -2.17
RTR1YER139C POM152P39685 1337 aa1.47□□□□□ -2.17
RTR1YER139C OPI3P05375 206 aa1.47□□□□□ -2.17
RTR1YER139C SSC1P0CS90 654 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C SLM5P25345 492 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C PHO91P27514 894 aa1.47□□□□□ -2.17
RTR1YER139C YEF1P32622 495 aa1.47□□□□□ -2.17
RTR1YER139C LTV1P34078 463 aa1.47□□□□□ -2.17
RTR1YER139C ECM8P38246 354 aa1.47□□□□□ -2.17
RTR1YER139C YHK8P38776 514 aa1.47□□□□□ -2.17
RTR1YER139C GPI16P38875 610 aa1.47□□□□□ -2.17
RTR1YER139C YNL208WP40159 199 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C ATM1P40416 690 aa1.47□□□□□ -2.17
RTR1YER139C BUD27P43573 796 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
RTR1YER139C ROG1P53118 685 aa1.47□□□□□ -2.17
RTR1YER139C MST27P53176 234 aa1.47□□□□□ -2.17
RTR1YER139C YGR117CP53270 476 aa1.47□□□□□ -2.17
RTR1YER139C CIK1Q01649 594 aa1.47□□□□□ -2.17
RTR1YER139C YDR341CQ05506 607 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C ECM7Q06200 448 aa1.47□□□□□ -2.17
RTR1YER139C CMS1Q07897 291 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C NSE1Q07913 336 aa1.47□□□□□ -2.17
RTR1YER139C FOL3Q12676 427 aaPredicted RBP1.47□□□□□ -2.17
RTR1YER139C HTZ1Q12692 134 aaKnown RBP1.47□□□□□ -2.17
RTR1YER139C MNE1P24720 663 aa1.46□□□□□ -2.18
RTR1YER139C NRP1P32770 719 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
RTR1YER139C YSC83P32792 385 aa1.46□□□□□ -2.18
RTR1YER139C RAD5P32849 1169 aaPredicted RBP1.46□□□□□ -2.18
RTR1YER139C DOA1P36037 715 aa1.46□□□□□ -2.18
RTR1YER139C QDR3P38227 689 aa1.46□□□□□ -2.18
RTR1YER139C CPR7P47103 393 aa1.46□□□□□ -2.18
RTR1YER139C STE24P47154 453 aa1.46□□□□□ -2.18
RTR1YER139C RPN14P53196 417 aa1.46□□□□□ -2.18
RTR1YER139C CLD1P53264 445 aa1.46□□□□□ -2.18
RTR1YER139C TRM112P53738 135 aaPredicted RBP1.46□□□□□ -2.18
RTR1YER139C COS1P53822 381 aa1.46□□□□□ -2.18
RTR1YER139C PRM6Q04705 352 aa1.46□□□□□ -2.18
RTR1YER139C SPE3Q12074 293 aaKnown RBP1.46□□□□□ -2.18
RTR1YER139C RNH203Q12338 110 aa1.46□□□□□ -2.18
RTR1YER139C YCR024C-BQ3E7Z8 88 aa1.46□□□□□ -2.18
RTR1YER139C NAG1Q8TGN9 163 aa1.46□□□□□ -2.18
RTR1YER139C TPK3P05986 398 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms