RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SPO12	P17123	173 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	PET123	P17558	318 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	DEG1	P31115	442 aa	Known RBP	5.2	□□□□□ -1.58
SNF11	YDR073W	YKL097C	P34245	136 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	SPC34	P36131	295 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	SLI1	P53304	468 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	YNL134C	P53912	376 aa	Known RBP	5.2	□□□□□ -1.58
SNF11	YDR073W	YMR102C	Q03177	834 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	INP2	Q03824	705 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	BOP2	Q06150	570 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	BSC1	Q12140	328 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	YDL009C	Q12210	107 aa		5.2	□□□□□ -1.58
SNF11	YDR073W	GDH1	P07262	454 aa	Known RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	RPB4	P20433	221 aa	Predicted RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	MRPL8	P22353	238 aa		5.19	□□□□□ -1.58
SNF11	YDR073W	CSM1	P25651	190 aa		5.19	□□□□□ -1.58
SNF11	YDR073W	DPH5	P32469	300 aa	Predicted RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	SKT5	P34226	696 aa		5.19	□□□□□ -1.58
SNF11	YDR073W	YKT6	P36015	200 aa	Known RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	BTT1	P40314	149 aa	Predicted RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	GCN20	P43535	752 aa	Known RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	GAT1	P43574	510 aa		5.19	□□□□□ -1.58
SNF11	YDR073W	TDA7	P53882	636 aa	Predicted RBP	5.19	□□□□□ -1.58
SNF11	YDR073W	TEF1	P02994	458 aa	Known RBP	5.18	□□□□□ -1.58
SNF11	YDR073W	GPI12	P23797	304 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	MXR2	P25566	168 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	RPL5	P26321	297 aa	Known RBP	5.18	□□□□□ -1.58
SNF11	YDR073W	VMA5	P31412	392 aa	Known RBP	5.18	□□□□□ -1.58
SNF11	YDR073W	MYO3	P36006	1272 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	VPS52	P39904	641 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	TOS2	P50078	622 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	YNR048W	P53740	393 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	PET117	Q02771	107 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	ODC1	Q03028	310 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	RSC9	Q03124	581 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	RVB1	Q03940	463 aa	Known RBP	5.18	□□□□□ -1.58
SNF11	YDR073W	NAT4	Q04751	285 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	GPN3	Q06543	272 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	MUM3	Q08750	479 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	AFT2	Q08957	416 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	NCA2	Q12374	616 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	YOR338W	Q99326	363 aa		5.18	□□□□□ -1.58
SNF11	YDR073W	RAD7	P06779	565 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	VPS3	P23643	1011 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	SPS22	P25380	463 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	DOA4	P32571	926 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	MSN4	P33749	630 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	MRPS5	P33759	307 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	TAE1	P38340	232 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	YHR045W	P38775	560 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	SHO1	P40073	367 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	DSE1	P40077	573 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	YGR117C	P53270	476 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	SPR6	Q01684	191 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	YDR415C	Q04033	374 aa	Predicted RBP	5.17	□□□□□ -1.58
SNF11	YDR073W	TIM18	Q08749	192 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	BTS1	Q12051	335 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	YOP1	Q12402	180 aa		5.17	□□□□□ -1.58
SNF11	YDR073W	AMD1	P15274	810 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	CDC23	P16522	626 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	TIP1	P27654	210 aa	Predicted RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	PRO3	P32263	286 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	VAM7	P32912	316 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	FLO5	P38894	1075 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	FAA2	P39518	744 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	CFD1	P40558	293 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	BNA6	P43619	295 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	GWT1	P47026	490 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	SSN8	P47821	323 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	KEL2	P50090	882 aa		5.16	□□□□□ -1.58
SNF11	YDR073W	ERG13	P54839	491 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	RLI1	Q03195	608 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	SAM4	Q08985	325 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	SLF1	Q12034	447 aa	Known RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	SSK22	P25390	1331 aa	Predicted RBP	5.16	□□□□□ -1.58
SNF11	YDR073W	SUA5	P32579	426 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	SKG6	P32900	734 aa	Predicted RBP	5.15	□□□□□ -1.59
SNF11	YDR073W	PPZ2	P33329	710 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	IML3	P38265	245 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	PEX32	P38292	413 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	MMS21	P38632	267 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	YIL024C	P40543	189 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	CGR1	P53188	120 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	YMR034C	Q05131	434 aa	Predicted RBP	5.15	□□□□□ -1.59
SNF11	YDR073W	YEH2	Q07950	538 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	OSW1	Q08692	278 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	CRC1	Q12289	327 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	ADF1	Q2V2Q1	113 aa		5.15	□□□□□ -1.59
SNF11	YDR073W	ARF2	P19146	181 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	YAP1	P19880	650 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	DAL2	P25335	343 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	ERG1	P32476	496 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	ZUO1	P32527	433 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	BMH2	P34730	273 aa	Known RBP	5.14	□□□□□ -1.59
SNF11	YDR073W	POP6	P53218	158 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	ESBP6	P53918	673 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	SPP2	Q02521	185 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	HER2	Q03557	464 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	UBX2	Q04228	584 aa		5.14	□□□□□ -1.59
SNF11	YDR073W	ATG38	Q05789	226 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms