RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W TY2B-LR1P0C2J3 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-FP0CX63 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-GR2P0CX64 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-CP25384 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-DR2Q03494 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY1B-DR1Q03855 1755 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-DR3Q07791 1770 aaKnown RBP5.42□□□□□ -1.54
VMS1YDR049W TY2B-OR1Q12113 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-DR1Q12472 1770 aa5.42□□□□□ -1.54
VMS1YDR049W TY2B-OR2Q12501 1770 aa5.42□□□□□ -1.54
VMS1YDR049W ADE4P04046 510 aaKnown RBP5.42□□□□□ -1.54
VMS1YDR049W PUT3P25502 979 aaPredicted RBP5.42□□□□□ -1.54
VMS1YDR049W FEN2P25621 512 aaKnown RBP5.42□□□□□ -1.54
VMS1YDR049W PDR3P33200 976 aa5.42□□□□□ -1.54
VMS1YDR049W CPR5P35176 225 aa5.42□□□□□ -1.54
VMS1YDR049W GMH1P36125 273 aa5.42□□□□□ -1.54
VMS1YDR049W AAP1P37898 856 aaKnown RBP5.42□□□□□ -1.54
VMS1YDR049W OPY1P38271 328 aa5.42□□□□□ -1.54
VMS1YDR049W FZO1P38297 855 aa5.42□□□□□ -1.54
VMS1YDR049W HIS2P38635 335 aa5.42□□□□□ -1.54
VMS1YDR049W UBA4P38820 440 aa5.42□□□□□ -1.54
VMS1YDR049W ECM1P39715 212 aa5.42□□□□□ -1.54
VMS1YDR049W OPT1P40897 799 aa5.42□□□□□ -1.54
VMS1YDR049W SPT20P50875 604 aa5.42□□□□□ -1.54
VMS1YDR049W VPS73P53142 486 aaKnown RBP5.42□□□□□ -1.54
VMS1YDR049W SPC98P53540 846 aa5.42□□□□□ -1.54
VMS1YDR049W MDM30Q05930 598 aa5.42□□□□□ -1.54
VMS1YDR049W OPT2Q06593 877 aa5.42□□□□□ -1.54
VMS1YDR049W PGK1P00560 416 aaKnown RBP5.41□□□□□ -1.54
VMS1YDR049W SAC7P17121 654 aa5.41□□□□□ -1.54
VMS1YDR049W YMR31P19955 123 aa5.41□□□□□ -1.54
VMS1YDR049W YCR015CP25616 317 aa5.41□□□□□ -1.54
VMS1YDR049W VHC1P38329 1120 aa5.41□□□□□ -1.54
VMS1YDR049W YAP3P38749 330 aa5.41□□□□□ -1.54
VMS1YDR049W ELO1P39540 310 aa5.41□□□□□ -1.54
VMS1YDR049W SNL1P40548 159 aa5.41□□□□□ -1.54
VMS1YDR049W MMT1Q03218 510 aa5.41□□□□□ -1.54
VMS1YDR049W PER33Q12144 273 aa5.41□□□□□ -1.54
VMS1YDR049W PNS1Q12412 539 aa5.41□□□□□ -1.54
VMS1YDR049W MYO4P32492 1471 aa5.41□□□□□ -1.54
VMS1YDR049W POX1P13711 748 aa5.41□□□□□ -1.54
VMS1YDR049W CKI1P20485 582 aa5.41□□□□□ -1.54
VMS1YDR049W CHA1P25379 360 aaKnown RBP5.41□□□□□ -1.54
VMS1YDR049W IDH1P28834 360 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
VMS1YDR049W SSO1P32867 290 aa5.41□□□□□ -1.54
VMS1YDR049W MRPL7P36519 292 aa5.41□□□□□ -1.54
VMS1YDR049W SRP14P38985 146 aa5.41□□□□□ -1.54
VMS1YDR049W EDC3P39998 551 aaKnown RBP5.41□□□□□ -1.54
VMS1YDR049W YER137CP40083 148 aaKnown RBP5.41□□□□□ -1.54
VMS1YDR049W TED1P40533 473 aa5.41□□□□□ -1.54
VMS1YDR049W ATG27P46989 271 aa5.41□□□□□ -1.54
VMS1YDR049W SSN8P47821 323 aa5.41□□□□□ -1.54
VMS1YDR049W YGL204CP53089 101 aa5.41□□□□□ -1.54
VMS1YDR049W YNL140CP53910 189 aa5.41□□□□□ -1.54
VMS1YDR049W ALG11P53954 548 aaKnown RBP5.41□□□□□ -1.54
VMS1YDR049W PLB2Q03674 706 aa5.41□□□□□ -1.54
VMS1YDR049W RSA1Q08932 381 aa5.41□□□□□ -1.54
VMS1YDR049W SMC4Q12267 1418 aa5.4□□□□□ -1.54
VMS1YDR049W YCF1P39109 1515 aaKnown RBP5.4□□□□□ -1.54
VMS1YDR049W SCEIP03882 235 aa5.4□□□□□ -1.55
VMS1YDR049W RHO2P06781 192 aa5.4□□□□□ -1.55
VMS1YDR049W PCT1P13259 424 aa5.4□□□□□ -1.55
VMS1YDR049W CBS2P14905 389 aa5.4□□□□□ -1.55
VMS1YDR049W SRP54P20424 541 aaKnown RBP5.4□□□□□ -1.55
VMS1YDR049W RNR3P21672 869 aaKnown RBP5.4□□□□□ -1.55
VMS1YDR049W NDC1P32500 655 aa5.4□□□□□ -1.55
VMS1YDR049W ICS2P38284 255 aa5.4□□□□□ -1.55
VMS1YDR049W CCT4P39078 528 aaKnown RBP5.4□□□□□ -1.55
VMS1YDR049W YER184CP39961 794 aa5.4□□□□□ -1.55
VMS1YDR049W GET2P40056 285 aa5.4□□□□□ -1.55
VMS1YDR049W COA1P40452 197 aa5.4□□□□□ -1.55
VMS1YDR049W YJR154WP47181 346 aa5.4□□□□□ -1.55
VMS1YDR049W PKP2P53170 491 aa5.4□□□□□ -1.55
VMS1YDR049W RPS15Q01855 142 aaKnown RBP5.4□□□□□ -1.55
VMS1YDR049W SLD5Q03406 294 aa5.4□□□□□ -1.55
VMS1YDR049W THI3Q07471 609 aa5.4□□□□□ -1.55
VMS1YDR049W DIA2Q08496 732 aaPredicted RBP5.4□□□□□ -1.55
VMS1YDR049W ATG9Q12142 997 aa5.4□□□□□ -1.55
VMS1YDR049W SIA1Q12212 622 aa5.4□□□□□ -1.55
VMS1YDR049W SNF8Q12483 233 aa5.4□□□□□ -1.55
VMS1YDR049W PET20Q99373 253 aa5.4□□□□□ -1.55
VMS1YDR049W HRP1Q99383 534 aaKnown RBP5.4□□□□□ -1.55
VMS1YDR049W TY1B-DR3Q99231 1755 aa5.39□□□□□ -1.55
VMS1YDR049W YLR415CO13578 112 aa5.39□□□□□ -1.55
VMS1YDR049W HPR1P17629 752 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W MSK1P32048 576 aa5.39□□□□□ -1.55
VMS1YDR049W ACH1P32316 526 aa5.39□□□□□ -1.55
VMS1YDR049W PRP21P32524 280 aaPredicted RBP5.39□□□□□ -1.55
VMS1YDR049W ZUO1P32527 433 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W CDC13P32797 924 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W RGT1P32862 1170 aa5.39□□□□□ -1.55
VMS1YDR049W TRM5P38793 499 aa5.39□□□□□ -1.55
VMS1YDR049W SEO1P39709 593 aa5.39□□□□□ -1.55
VMS1YDR049W GAT2P40209 560 aa5.39□□□□□ -1.55
VMS1YDR049W PTR3P43606 678 aa5.39□□□□□ -1.55
VMS1YDR049W ZRG17P53735 605 aa5.39□□□□□ -1.55
VMS1YDR049W IST1P53843 298 aaPredicted RBP5.39□□□□□ -1.55
VMS1YDR049W SLG1P54867 378 aa5.39□□□□□ -1.55
VMS1YDR049W PEX10Q05568 337 aa5.39□□□□□ -1.55
VMS1YDR049W RUP1Q12242 671 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms