RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YOX1P34161 385 aa5.34□□□□□ -1.55
PDB1YBR221C COS9P36034 407 aa5.34□□□□□ -1.55
PDB1YBR221C MCR1P36060 302 aaKnown RBP5.34□□□□□ -1.55
PDB1YBR221C RFT1P38206 574 aaPredicted RBP5.34□□□□□ -1.55
PDB1YBR221C RTC2P38279 296 aa5.34□□□□□ -1.55
PDB1YBR221C SPP381P38282 291 aaPredicted RBP5.34□□□□□ -1.55
PDB1YBR221C SAF1P38352 637 aa5.34□□□□□ -1.55
PDB1YBR221C BIG1P38813 335 aa5.34□□□□□ -1.55
PDB1YBR221C SBE22P38814 852 aa5.34□□□□□ -1.55
PDB1YBR221C FMO1P38866 432 aa5.34□□□□□ -1.55
PDB1YBR221C RPH1P39956 796 aa5.34□□□□□ -1.55
PDB1YBR221C YER130CP39959 443 aa5.34□□□□□ -1.55
PDB1YBR221C AGP3P43548 558 aa5.34□□□□□ -1.55
PDB1YBR221C TAF6P53040 516 aa5.34□□□□□ -1.55
PDB1YBR221C GET1P53192 235 aa5.34□□□□□ -1.55
PDB1YBR221C TRM112P53738 135 aaPredicted RBP5.34□□□□□ -1.55
PDB1YBR221C SDH1Q00711 640 aa5.34□□□□□ -1.55
PDB1YBR221C IZH1Q03419 316 aa5.34□□□□□ -1.55
PDB1YBR221C ASM4Q05166 528 aa5.34□□□□□ -1.55
PDB1YBR221C ORM2Q06144 216 aa5.34□□□□□ -1.55
PDB1YBR221C YPR147CQ06522 304 aaKnown RBP5.34□□□□□ -1.55
PDB1YBR221C CDA2Q06703 312 aa5.34□□□□□ -1.55
PDB1YBR221C SYO1Q07395 620 aa5.34□□□□□ -1.55
PDB1YBR221C DNL4Q08387 944 aaPredicted RBP5.34□□□□□ -1.55
PDB1YBR221C PEX27Q08580 376 aa5.34□□□□□ -1.55
PDB1YBR221C GRE1Q08969 168 aa5.34□□□□□ -1.55
PDB1YBR221C BAG7Q12128 409 aa5.34□□□□□ -1.55
PDB1YBR221C SPO24Q3E752 67 aa5.34□□□□□ -1.55
PDB1YBR221C GDH1P07262 454 aaKnown RBP5.33□□□□□ -1.56
PDB1YBR221C RPL31BP0C2H9 113 aaKnown RBP5.33□□□□□ -1.56
PDB1YBR221C RPL18AP0CX49 186 aaKnown RBP5.33□□□□□ -1.56
PDB1YBR221C RPL18BP0CX50 186 aaKnown RBP5.33□□□□□ -1.56
PDB1YBR221C DAL82P21705 255 aa5.33□□□□□ -1.56
PDB1YBR221C DCG1P32460 244 aa5.33□□□□□ -1.56
PDB1YBR221C SKT5P34226 696 aa5.33□□□□□ -1.56
PDB1YBR221C PRS4P38063 326 aaPredicted RBP5.33□□□□□ -1.56
PDB1YBR221C YHR122WP38829 231 aa5.33□□□□□ -1.56
PDB1YBR221C FET3P38993 636 aa5.33□□□□□ -1.56
PDB1YBR221C MSS4P38994 779 aa5.33□□□□□ -1.56
PDB1YBR221C YJL163CP46996 555 aa5.33□□□□□ -1.56
PDB1YBR221C RTT101P47050 842 aa5.33□□□□□ -1.56
PDB1YBR221C APS3P47064 194 aa5.33□□□□□ -1.56
PDB1YBR221C MSE1P48525 536 aa5.33□□□□□ -1.56
PDB1YBR221C YPT11P48559 417 aa5.33□□□□□ -1.56
PDB1YBR221C YGR035CP53222 116 aa5.33□□□□□ -1.56
PDB1YBR221C COX18P53239 316 aa5.33□□□□□ -1.56
PDB1YBR221C YGR127WP53275 312 aa5.33□□□□□ -1.56
PDB1YBR221C NOP19P53317 196 aaPredicted RBP5.33□□□□□ -1.56
PDB1YBR221C MPS1P54199 764 aa5.33□□□□□ -1.56
PDB1YBR221C YAT1P80235 687 aa5.33□□□□□ -1.56
PDB1YBR221C ARG5,6Q01217 863 aa5.33□□□□□ -1.56
PDB1YBR221C KRE28Q04431 385 aa5.33□□□□□ -1.56
PDB1YBR221C AIM33Q04516 312 aa5.33□□□□□ -1.56
PDB1YBR221C POM34Q12445 299 aa5.33□□□□□ -1.56
PDB1YBR221C YPT1P01123 206 aaKnown RBP5.32□□□□□ -1.56
PDB1YBR221C CHS1P08004 1131 aa5.32□□□□□ -1.56
PDB1YBR221C DSF1P0CX08 502 aa5.32□□□□□ -1.56
PDB1YBR221C YNR073CP0CX09 502 aa5.32□□□□□ -1.56
PDB1YBR221C TUP1P16649 713 aa5.32□□□□□ -1.56
PDB1YBR221C NAM9P27929 486 aa5.32□□□□□ -1.56
PDB1YBR221C ELM1P32801 640 aa5.32□□□□□ -1.56
PDB1YBR221C FZO1P38297 855 aa5.32□□□□□ -1.56
PDB1YBR221C DIA4P38705 446 aaPredicted RBP5.32□□□□□ -1.56
PDB1YBR221C YHR078WP38799 552 aa5.32□□□□□ -1.56
PDB1YBR221C SPC97P38863 823 aa5.32□□□□□ -1.56
PDB1YBR221C CCT2P39076 527 aaKnown RBP5.32□□□□□ -1.56
PDB1YBR221C YNL195CP40168 261 aa5.32□□□□□ -1.56
PDB1YBR221C SOK2P53438 785 aaPredicted RBP5.32□□□□□ -1.56
PDB1YBR221C YDC1Q02896 317 aa5.32□□□□□ -1.56
PDB1YBR221C SSY1Q03770 852 aa5.32□□□□□ -1.56
PDB1YBR221C YMR160WQ03823 816 aa5.32□□□□□ -1.56
PDB1YBR221C ADH6Q04894 360 aaKnown RBP5.32□□□□□ -1.56
PDB1YBR221C MCM21Q06675 368 aa5.32□□□□□ -1.56
PDB1YBR221C YPD1Q07688 167 aa5.32□□□□□ -1.56
PDB1YBR221C MUM3Q08750 479 aa5.32□□□□□ -1.56
PDB1YBR221C YPR1Q12458 312 aa5.32□□□□□ -1.56
PDB1YBR221C SEN1Q00416 2231 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C HTB1P02293 131 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C HTB2P02294 131 aa5.31□□□□□ -1.56
PDB1YBR221C SPE1P08432 466 aa5.31□□□□□ -1.56
PDB1YBR221C ISY1P21374 235 aaPredicted RBP5.31□□□□□ -1.56
PDB1YBR221C NAR1P23503 491 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C FEN2P25621 512 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C ERG9P29704 444 aa5.31□□□□□ -1.56
PDB1YBR221C DEG1P31115 442 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C DSS4P32601 143 aa5.31□□□□□ -1.56
PDB1YBR221C HMT1P38074 348 aa5.31□□□□□ -1.56
PDB1YBR221C MIC12P38341 106 aa5.31□□□□□ -1.56
PDB1YBR221C PCA1P38360 1216 aa5.31□□□□□ -1.56
PDB1YBR221C CTF8P38877 133 aa5.31□□□□□ -1.56
PDB1YBR221C TVP23P38962 199 aa5.31□□□□□ -1.56
PDB1YBR221C ERG28P40030 148 aa5.31□□□□□ -1.56
PDB1YBR221C YER121WP40076 114 aa5.31□□□□□ -1.56
PDB1YBR221C POG1P40473 351 aa5.31□□□□□ -1.56
PDB1YBR221C BNA3P47039 444 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C YJR149WP47177 404 aa5.31□□□□□ -1.56
PDB1YBR221C YIP3P53633 176 aa5.31□□□□□ -1.56
PDB1YBR221C GIS1Q03833 894 aa5.31□□□□□ -1.56
PDB1YBR221C YML082WQ04533 649 aaKnown RBP5.31□□□□□ -1.56
PDB1YBR221C HOF1Q05080 669 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms